RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 NME4O00746 187 aa14.34□□□□□ -0.11
SHKBP1-215ENST00000597649 GPR171O14626 319 aa14.34□□□□□ -0.11
SHKBP1-215ENST00000597649 GYG2O15488 501 aa14.34□□□□□ -0.11
SHKBP1-215ENST00000597649 KIAA0513O60268 411 aa14.34□□□□□ -0.11
SHKBP1-215ENST00000597649 PGCP20142 388 aa14.34□□□□□ -0.11
SHKBP1-215ENST00000597649 PGM1P36871 562 aa14.34□□□□□ -0.11
SHKBP1-215ENST00000597649 APOBEC1P41238 236 aaKnown RBP14.34□□□□□ -0.11
SHKBP1-215ENST00000597649 PLAURQ03405 335 aa14.34□□□□□ -0.11
SHKBP1-215ENST00000597649 BNIP1Q12981 228 aa14.34□□□□□ -0.11
SHKBP1-215ENST00000597649 ADRM1Q16186 407 aa14.34□□□□□ -0.11
SHKBP1-215ENST00000597649 CARTPTQ16568 116 aa14.34□□□□□ -0.11
SHKBP1-215ENST00000597649 VMACQ2NL98 169 aa14.34□□□□□ -0.11
SHKBP1-215ENST00000597649 RPS26P11Q5JNZ5 115 aaPredicted RBP14.34□□□□□ -0.11
SHKBP1-215ENST00000597649 TSPO2Q5TGU0 170 aa14.34□□□□□ -0.11
SHKBP1-215ENST00000597649 LIPNQ5VXI9 398 aa14.34□□□□□ -0.11
SHKBP1-215ENST00000597649 CALHM3Q86XJ0 350 aa14.34□□□□□ -0.11
SHKBP1-215ENST00000597649 PTOV1Q86YD1 416 aa14.34□□□□□ -0.11
SHKBP1-215ENST00000597649 PIGXQ8TBF5 258 aa14.34□□□□□ -0.11
SHKBP1-215ENST00000597649 SLC25A43Q8WUT9 341 aaPredicted RBP14.34□□□□□ -0.11
SHKBP1-215ENST00000597649 TMEM234Q8WY98 164 aa14.34□□□□□ -0.11
SHKBP1-215ENST00000597649 ZG16BQ96DA0 208 aa14.34□□□□□ -0.11
SHKBP1-215ENST00000597649 ZNF607Q96SK3 696 aa14.34□□□□□ -0.11
SHKBP1-215ENST00000597649 KCTD14Q9BQ13 255 aaPredicted RBP14.34□□□□□ -0.11
SHKBP1-215ENST00000597649 SAP130Q9H0E3 1048 aa14.34□□□□□ -0.11
SHKBP1-215ENST00000597649 C1orf21Q9H246 121 aa14.34□□□□□ -0.11
SHKBP1-215ENST00000597649 SLC38A1Q9H2H9 487 aa14.34□□□□□ -0.11
SHKBP1-215ENST00000597649 TMEM181Q9P2C4 612 aa14.34□□□□□ -0.11
SHKBP1-215ENST00000597649 CHRNA9Q9UGM1 479 aa14.34□□□□□ -0.11
SHKBP1-215ENST00000597649 ZNF232Q9UNY5 417 aa14.34□□□□□ -0.11
SHKBP1-215ENST00000597649 TRRAPQ9Y4A5 3859 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 LOC390937A0A1W2PQ73 354 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 ELOVL7A1L3X0 281 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 LRP5LA4QPB2 252 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 GMNNO75496 209 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 SERPINB7O75635 380 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 DBIP07108 87 aaKnown RBP14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 IL7RP16871 459 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 ZNF23P17027 643 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 HNF1AP20823 631 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 AQP1P29972 269 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 PCGF2P35227 344 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 GSK3BP49841 420 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 GZMMP51124 257 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 OR2B6P58173 313 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 GABPB1Q06547 395 aaPredicted RBP14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 MAPK11Q15759 364 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 IQCCQ4KMZ1 466 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 DNAL1Q4LDG9 190 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 SAMD4BQ5PRF9 694 aaKnown RBP14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 CASP12Q6UXS9 341 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 EIF3MQ7L2H7 374 aaKnown RBP14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 HMGN2P46Q86SG4 172 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 MICU2Q8IYU8 434 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 C17orf78Q8N4C9 275 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 FAM71CQ8NEG0 241 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 OR52P1PQ8NH57 321 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 SLC26A7Q8TE54 656 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 OIT3Q8WWZ8 545 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 SPATA5L1Q9BVQ7 753 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 BPESC1Q9GZL8 116 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 BCL2L10Q9HD36 194 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 ABCD2Q9UBJ2 740 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 AMDHD2Q9Y303 409 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 IFT52Q9Y366 437 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 HDGFL3Q9Y3E1 203 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 FLVCR1Q9Y5Y0 555 aa14.33□□□□□ -0.12
SHKBP1-215ENST00000597649 AGAP5A6NIR3 686 aa14.32□□□□□ -0.12
SHKBP1-215ENST00000597649 IMPDH2P12268 514 aa14.32□□□□□ -0.12
SHKBP1-215ENST00000597649 ETS2P15036 469 aa14.32□□□□□ -0.12
SHKBP1-215ENST00000597649 CCNA2P20248 432 aa14.32□□□□□ -0.12
SHKBP1-215ENST00000597649 RYKP34925 604 aa14.32□□□□□ -0.12
SHKBP1-215ENST00000597649 SLC17A1Q14916 467 aa14.32□□□□□ -0.12
SHKBP1-215ENST00000597649 LARS2Q15031 903 aaKnown RBP14.32□□□□□ -0.12
SHKBP1-215ENST00000597649 AP1ARQ63HQ0 302 aa14.32□□□□□ -0.12
SHKBP1-215ENST00000597649 PATL1Q86TB9 770 aaKnown RBP14.32□□□□□ -0.12
SHKBP1-215ENST00000597649 RNF148Q8N7C7 305 aa14.32□□□□□ -0.12
SHKBP1-215ENST00000597649 ZIC4Q8N9L1 334 aa14.32□□□□□ -0.12
SHKBP1-215ENST00000597649 C1orf162Q8NEQ5 155 aaPredicted RBP14.32□□□□□ -0.12
SHKBP1-215ENST00000597649 WDR60Q8WVS4 1066 aa14.32□□□□□ -0.12
SHKBP1-215ENST00000597649 ZHX1-C8orf76Q96EF9 292 aa14.32□□□□□ -0.12
SHKBP1-215ENST00000597649 VRK1Q99986 396 aaPredicted RBP14.32□□□□□ -0.12
SHKBP1-215ENST00000597649 BTBD10Q9BSF8 475 aa14.32□□□□□ -0.12
SHKBP1-215ENST00000597649 ARMC7Q9H6L4 198 aa14.32□□□□□ -0.12
SHKBP1-215ENST00000597649 TAS2R1Q9NYW7 299 aa14.32□□□□□ -0.12
SHKBP1-215ENST00000597649 UPB1Q9UBR1 384 aa14.32□□□□□ -0.12
SHKBP1-215ENST00000597649 FKBP7Q9Y680 259 aa14.32□□□□□ -0.12
SHKBP1-215ENST00000597649 IGHV1-18A0A0C4DH31 117 aa14.31□□□□□ -0.12
SHKBP1-215ENST00000597649 PRORSD1PA6NEY8 169 aa14.31□□□□□ -0.12
SHKBP1-215ENST00000597649 CLDN24A6NM45 220 aa14.31□□□□□ -0.12
SHKBP1-215ENST00000597649 DNPH1O43598 174 aa14.31□□□□□ -0.12
SHKBP1-215ENST00000597649 IFNA14P01570 189 aa14.31□□□□□ -0.12
SHKBP1-215ENST00000597649 ITGA2P17301 1181 aa14.31□□□□□ -0.12
SHKBP1-215ENST00000597649 TCN1P20061 433 aaPredicted RBP14.31□□□□□ -0.12
SHKBP1-215ENST00000597649 IL2RGP31785 369 aa14.31□□□□□ -0.12
SHKBP1-215ENST00000597649 SERPINF1P36955 418 aa14.31□□□□□ -0.12
SHKBP1-215ENST00000597649 PRPS1P60891 318 aa14.31□□□□□ -0.12
SHKBP1-215ENST00000597649 KCNJ10P78508 379 aa14.31□□□□□ -0.12
SHKBP1-215ENST00000597649 ZSWIM7Q19AV6 140 aa14.31□□□□□ -0.12
SHKBP1-215ENST00000597649 SPATS1Q496A3 300 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms