RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 ARR3P36575 388 aa13.74□□□□□ -0.21
GTF2F1-203ENST00000594213 POU3F1Q03052 451 aaPredicted RBP13.74□□□□□ -0.21
GTF2F1-203ENST00000594213 RGNQ15493 299 aa13.74□□□□□ -0.21
GTF2F1-203ENST00000594213 MSMPQ1L6U9 139 aa13.74□□□□□ -0.21
GTF2F1-203ENST00000594213 CEACAM16Q2WEN9 425 aa13.74□□□□□ -0.21
GTF2F1-203ENST00000594213 SLC9B1Q4ZJI4 515 aa13.74□□□□□ -0.21
GTF2F1-203ENST00000594213 ZNF311Q5JNZ3 666 aa13.74□□□□□ -0.21
GTF2F1-203ENST00000594213 ATG16L1Q676U5 607 aa13.74□□□□□ -0.21
GTF2F1-203ENST00000594213 MAVSQ7Z434 540 aa13.74□□□□□ -0.21
GTF2F1-203ENST00000594213 CCDC36Q8IYA8 594 aa13.74□□□□□ -0.21
GTF2F1-203ENST00000594213 SVOPLQ8N434 492 aa13.74□□□□□ -0.21
GTF2F1-203ENST00000594213 LSMEM1Q8N8F7 131 aa13.74□□□□□ -0.21
GTF2F1-203ENST00000594213 IL17RDQ8NFM7 739 aa13.74□□□□□ -0.21
GTF2F1-203ENST00000594213 GTF2H4Q92759 462 aa13.74□□□□□ -0.21
GTF2F1-203ENST00000594213 ITCHQ96J02 903 aa13.74□□□□□ -0.21
GTF2F1-203ENST00000594213 ZNF75AQ96N20 296 aa13.74□□□□□ -0.21
GTF2F1-203ENST00000594213 ANKRD27Q96NW4 1050 aa13.74□□□□□ -0.21
GTF2F1-203ENST00000594213 OR2M2Q96R28 347 aa13.74□□□□□ -0.21
GTF2F1-203ENST00000594213 PAIP1Q9H074 479 aaKnown RBP13.74□□□□□ -0.21
GTF2F1-203ENST00000594213 CRLF2Q9HC73 371 aa13.74□□□□□ -0.21
GTF2F1-203ENST00000594213 A4GALTQ9NPC4 353 aa13.74□□□□□ -0.21
GTF2F1-203ENST00000594213 PCDHB14Q9Y5E9 798 aa13.74□□□□□ -0.21
GTF2F1-203ENST00000594213 VSTM5A8MXK1 200 aa13.73□□□□□ -0.21
GTF2F1-203ENST00000594213 M0R082 166 aa13.73□□□□□ -0.21
GTF2F1-203ENST00000594213 AIM2O14862 343 aa13.73□□□□□ -0.21
GTF2F1-203ENST00000594213 OR2T1O43869 369 aa13.73□□□□□ -0.21
GTF2F1-203ENST00000594213 C8BP07358 591 aa13.73□□□□□ -0.21
GTF2F1-203ENST00000594213 HTR2AP28223 471 aa13.73□□□□□ -0.21
GTF2F1-203ENST00000594213 CHN2P52757 468 aa13.73□□□□□ -0.21
GTF2F1-203ENST00000594213 PHYHD1Q5SRE7 291 aa13.73□□□□□ -0.21
GTF2F1-203ENST00000594213 FAM69AQ5T7M9 428 aa13.73□□□□□ -0.21
GTF2F1-203ENST00000594213 HHATQ5VTY9 493 aa13.73□□□□□ -0.21
GTF2F1-203ENST00000594213 H1FNTQ75WM6 255 aaPredicted RBP13.73□□□□□ -0.21
GTF2F1-203ENST00000594213 SPATA21Q7Z572 469 aa13.73□□□□□ -0.21
GTF2F1-203ENST00000594213 MDP1Q86V88 176 aa13.73□□□□□ -0.21
GTF2F1-203ENST00000594213 COMTD1Q86VU5 262 aa13.73□□□□□ -0.21
GTF2F1-203ENST00000594213 CDK20Q8IZL9 346 aa13.73□□□□□ -0.21
GTF2F1-203ENST00000594213 OR9I1Q8NGQ6 314 aa13.73□□□□□ -0.21
GTF2F1-203ENST00000594213 ZNF417Q8TAU3 575 aa13.73□□□□□ -0.21
GTF2F1-203ENST00000594213 MAL2Q969L2 176 aa13.73□□□□□ -0.21
GTF2F1-203ENST00000594213 ZNF587Q96SQ5 575 aaPredicted RBP13.73□□□□□ -0.21
GTF2F1-203ENST00000594213 PAIP2Q9BPZ3 127 aaKnown RBP13.73□□□□□ -0.21
GTF2F1-203ENST00000594213 PARD6BQ9BYG5 372 aa13.73□□□□□ -0.21
GTF2F1-203ENST00000594213 RMND5AQ9H871 391 aa13.73□□□□□ -0.21
GTF2F1-203ENST00000594213 NOX3Q9HBY0 568 aa13.73□□□□□ -0.21
GTF2F1-203ENST00000594213 A0A1B0GWA3 101 aa13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 ZNF99A8MXY4 864 aaPredicted RBP13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 SLCO1B7G3V0H7 640 aa13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 MS4A18H0YCH9 400 aa13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 ANP32DO95626 131 aa13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 HPRP00739 348 aa13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 KITP10721 976 aa13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 NR4A1P22736 598 aa13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 GRPRP30550 384 aa13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 POLR2JP52435 117 aaKnown RBP13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 CDH15P55291 814 aa13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 ADRM1Q16186 407 aa13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 MS4A18Q3C1V0 323 aa13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 CEP85LQ5SZL2 805 aa13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 LIPNQ5VXI9 398 aa13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 NXNQ6DKJ4 435 aa13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 C5orf46Q6UWT4 87 aa13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 ZNF627Q7L945 461 aa13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 NET1Q7Z628 596 aaPredicted RBP13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 WDFY1Q8IWB7 410 aa13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 C20orf196Q8IYI0 205 aa13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 GPR137CQ8N3F9 429 aa13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 RFLNBQ8N5W9 214 aa13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 LINC01356Q8N9X3 169 aa13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 ADPRHL1Q8NDY3 354 aa13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 PIK3C3Q8NEB9 887 aa13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 BBS10Q8TAM1 723 aa13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 UBASH3BQ8TF42 649 aa13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 CKAP2Q8WWK9 683 aa13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 ZBTB9Q96C00 473 aa13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 TRIM44Q96DX7 344 aaPredicted RBP13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 SLC41A3Q96GZ6 507 aa13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 OR52B2Q96RD2 323 aa13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 KLHL14Q9P2G3 628 aa13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 TMEFF2Q9UIK5 374 aaPredicted RBP13.72□□□□□ -0.21
GTF2F1-203ENST00000594213 TRAV36DV7A0A075B6V5 113 aa13.71□□□□□ -0.21
GTF2F1-203ENST00000594213 CLIC1O00299 241 aa13.71□□□□□ -0.21
GTF2F1-203ENST00000594213 ADRA2AP08913 450 aa13.71□□□□□ -0.21
GTF2F1-203ENST00000594213 ZNF35P13682 527 aa13.71□□□□□ -0.21
GTF2F1-203ENST00000594213 HLA-DOBP13765 273 aa13.71□□□□□ -0.21
GTF2F1-203ENST00000594213 ETS2P15036 469 aa13.71□□□□□ -0.21
GTF2F1-203ENST00000594213 APEX1P27695 318 aaKnown RBP13.71□□□□□ -0.21
GTF2F1-203ENST00000594213 PRKAR1BP31321 381 aa13.71□□□□□ -0.21
GTF2F1-203ENST00000594213 EVX1P49640 407 aa13.71□□□□□ -0.21
GTF2F1-203ENST00000594213 NPRL3Q12980 569 aa13.71□□□□□ -0.21
GTF2F1-203ENST00000594213 C1DQ13901 141 aaKnown RBP13.71□□□□□ -0.21
GTF2F1-203ENST00000594213 DAG1Q14118 895 aa13.71□□□□□ -0.21
GTF2F1-203ENST00000594213 TRIP10Q15642 601 aa13.71□□□□□ -0.21
GTF2F1-203ENST00000594213 ANKRD42Q8N9B4 389 aa13.71□□□□□ -0.21
GTF2F1-203ENST00000594213 OR6S1Q8NH40 331 aa13.71□□□□□ -0.21
GTF2F1-203ENST00000594213 SLC38A4Q969I6 547 aa13.71□□□□□ -0.21
GTF2F1-203ENST00000594213 LRR1Q96L50 414 aa13.71□□□□□ -0.21
GTF2F1-203ENST00000594213 SNX18Q96RF0 628 aa13.71□□□□□ -0.21
GTF2F1-203ENST00000594213 CENPHQ9H3R5 247 aa13.71□□□□□ -0.21
GTF2F1-203ENST00000594213 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms