RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.64□□□□□ -1.35
NPC1-208ENST00000590301 LEF1Q9UJU2 399 aaPredicted RBP6.64□□□□□ -1.35
NPC1-208ENST00000590301 ANGPT4Q9Y264 503 aa6.64□□□□□ -1.35
NPC1-208ENST00000590301 FKBP7Q9Y680 259 aa6.64□□□□□ -1.35
NPC1-208ENST00000590301 ATP23Q9Y6H3 246 aa6.64□□□□□ -1.35
NPC1-208ENST00000590301 STAB1Q9NY15 2570 aa6.64□□□□□ -1.35
NPC1-208ENST00000590301 ROS1P08922 2347 aa6.64□□□□□ -1.35
NPC1-208ENST00000590301 IGHV1-18A0A0C4DH31 117 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 A0A1W2PR80 420 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 B9A039 149 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 ATP6V1G2-DDX39BF2Z307 99 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 M0R082 166 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 NDUFS8O00217 210 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 NDUFS7O75251 213 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 ENTPD5O75356 428 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 MPDZO75970 2070 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 SASH3O75995 380 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 ZNF432O94892 652 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 LGI1O95970 557 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 C8BP07358 591 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 CDH2P19022 906 aaPredicted RBP6.63□□□□□ -1.35
NPC1-208ENST00000590301 ARR3P36575 388 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 RPS5P46782 204 aaKnown RBP6.63□□□□□ -1.35
NPC1-208ENST00000590301 SELENOPP49908 381 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 RGS8P57771 180 aaPredicted RBP6.63□□□□□ -1.35
NPC1-208ENST00000590301 SNRPD2P62316 118 aaKnown RBP6.63□□□□□ -1.35
NPC1-208ENST00000590301 HOXC5Q00444 222 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 ROR2Q01974 943 aaKnown RBP6.63□□□□□ -1.35
NPC1-208ENST00000590301 EGR4Q05215 589 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 LOXL1Q08397 574 aaPredicted RBP6.63□□□□□ -1.35
NPC1-208ENST00000590301 SCARB2Q14108 478 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 PAGE3Q5JUK9 113 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 METTL21CQ5VZV1 264 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 B3GLCTQ6Y288 498 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 FBN3Q75N90 2809 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 HDXQ7Z353 690 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 ARMC8Q8IUR7 673 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 GPR137CQ8N3F9 429 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 DPP10Q8N608 796 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 C11orf65Q8NCR3 313 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 IL17RDQ8NFM7 739 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 ZNF417Q8TAU3 575 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 FAM168AQ92567 244 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 PROX1Q92786 737 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 TAAR8Q969N4 342 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 SLC41A3Q96GZ6 507 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 LRR1Q96L50 414 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 ALKBH3Q96Q83 286 aaPredicted RBP6.63□□□□□ -1.35
NPC1-208ENST00000590301 ZNF587Q96SQ5 575 aaPredicted RBP6.63□□□□□ -1.35
NPC1-208ENST00000590301 EBF4Q9BQW3 602 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 CPPED1Q9BRF8 314 aaPredicted RBP6.63□□□□□ -1.35
NPC1-208ENST00000590301 TMEM43Q9BTV4 400 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 C1QTNF6Q9BXI9 259 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 ASPNQ9BXN1 380 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 DENND2DQ9H6A0 471 aaPredicted RBP6.63□□□□□ -1.35
NPC1-208ENST00000590301 VIPAS39Q9H9C1 493 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 MYOZ1Q9NP98 299 aaPredicted RBP6.63□□□□□ -1.35
NPC1-208ENST00000590301 B3GAT2Q9NPZ5 323 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 ARGLU1Q9NWB6 273 aaPredicted RBP6.63□□□□□ -1.35
NPC1-208ENST00000590301 VAPAQ9P0L0 249 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 KLHL14Q9P2G3 628 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 B3GAT1Q9P2W7 334 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 GDF2Q9UK05 429 aaPredicted RBP6.63□□□□□ -1.35
NPC1-208ENST00000590301 NOX1Q9Y5S8 564 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 MXRA5Q9NR99 2828 aa6.63□□□□□ -1.35
NPC1-208ENST00000590301 CSPG4Q6UVK1 2322 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 COL6A5A8TX70 2615 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 IGKV1D-42A0A075B6H8 117 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 IGHV4-30-2A0A087WSY4 118 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 A0A087WUJ7 227 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 A0A0B4J2E0 115 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 A0A1B0GX12 115 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 A8MV72 311 aaPredicted RBP6.62□□□□□ -1.35
NPC1-208ENST00000590301 ANGPT2O15123 496 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 TPD52L2O43399 206 aaKnown RBP6.62□□□□□ -1.35
NPC1-208ENST00000590301 TRAF3IP2O43734 574 aaPredicted RBP6.62□□□□□ -1.35
NPC1-208ENST00000590301 UPK3AO75631 287 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 MT-ATP6P00846 226 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 IFNA2P01563 188 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 IGKV3-15P01624 115 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 IGLV1-44P01699 117 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 ERCC1P07992 297 aaPredicted RBP6.62□□□□□ -1.35
NPC1-208ENST00000590301 NQO1P15559 274 aaKnown RBP6.62□□□□□ -1.35
NPC1-208ENST00000590301 CBR1P16152 277 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 HTR2AP28223 471 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 GRPRP30550 384 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 SERPINF1P36955 418 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 CLDN17P56750 224 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 PCBP3P57721 371 aaKnown RBP6.62□□□□□ -1.35
NPC1-208ENST00000590301 ARF1P84077 181 aaKnown RBP6.62□□□□□ -1.35
NPC1-208ENST00000590301 VLDLRP98155 873 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 NAAAQ02083 359 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 EFNB3Q15768 340 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 ADRM1Q16186 407 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 CYP51A1Q16850 503 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 RUNDC3AQ59EK9 446 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 INTS11Q5TA45 600 aaKnown RBP6.62□□□□□ -1.35
NPC1-208ENST00000590301 ZNF613Q6PF04 617 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 DLEU7Q6UYE1 221 aa6.62□□□□□ -1.35
NPC1-208ENST00000590301 ZNF627Q7L945 461 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms