RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 CCNA2P20248 432 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 MAKP20794 623 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 FKBP2P26885 142 aaKnown RBP4.89□□□□□ -1.63
DNMT1-220ENST00000589351 APOBEC3AP31941 199 aaPredicted RBP4.89□□□□□ -1.63
DNMT1-220ENST00000589351 RPL3P39023 403 aaKnown RBP4.89□□□□□ -1.63
DNMT1-220ENST00000589351 ACAA2P42765 397 aaKnown RBP4.89□□□□□ -1.63
DNMT1-220ENST00000589351 EFNA4P52798 201 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 CSNK2A1P68400 391 aaPredicted RBP4.89□□□□□ -1.63
DNMT1-220ENST00000589351 RPP30P78346 268 aaKnown RBP4.89□□□□□ -1.63
DNMT1-220ENST00000589351 ZNF844Q08AG5 666 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 HSPB3Q12988 150 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 SELENBP1Q13228 472 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 SMU1Q2TAY7 513 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 UNC50Q53HI1 259 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 CFAP157Q5JU67 520 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 NOXRED1Q6NXP6 359 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 UGT2A3Q6UWM9 527 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 ZDHHC24Q6UX98 284 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 LRIG3Q6UXM1 1119 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 ZNF551Q7Z340 670 aaPredicted RBP4.89□□□□□ -1.63
DNMT1-220ENST00000589351 NATD1Q8N6N6 113 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 CCNYL1Q8N7R7 359 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 STPG3Q8N7X2 389 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 GATSQ8NAP1 163 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 NFKBIDQ8NI38 313 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 TMEM234Q8WY98 164 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 HOXB13Q92826 284 aaPredicted RBP4.89□□□□□ -1.63
DNMT1-220ENST00000589351 FAM162AQ96A26 154 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 PPCDCQ96CD2 204 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 L3HYPDHQ96EM0 354 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 MS4A4EQ96PG1 132 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 RBM14Q96PK6 669 aaKnown RBP4.89□□□□□ -1.63
DNMT1-220ENST00000589351 NR1H4Q96RI1 486 aaPredicted RBP4.89□□□□□ -1.63
DNMT1-220ENST00000589351 STACQ99469 402 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 C19orf24Q9BVV8 132 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 BTBD2Q9BX70 525 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 PCDHAC1Q9H158 963 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 BCO1Q9HAY6 547 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 TCF7L2Q9NQB0 619 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 DUSP22Q9NRW4 184 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 ACSS1Q9NUB1 689 aaPredicted RBP4.89□□□□□ -1.63
DNMT1-220ENST00000589351 PARPBPQ9NWS1 579 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 DCDC2Q9UHG0 476 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 OAZ3Q9UMX2 235 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 NOSIPQ9Y314 301 aaKnown RBP4.89□□□□□ -1.63
DNMT1-220ENST00000589351 POLR3HQ9Y535 204 aaPredicted RBP4.89□□□□□ -1.63
DNMT1-220ENST00000589351 SPIN1Q9Y657 262 aaPredicted RBP4.89□□□□□ -1.63
DNMT1-220ENST00000589351 FKBP7Q9Y680 259 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 TLN2Q9Y4G6 2542 aa4.89□□□□□ -1.63
DNMT1-220ENST00000589351 ABCA1O95477 2261 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 ATRQ13535 2644 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 GOLGA8QA0A0J9YX86 632 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 EXOC1LA0A1B0GW35 172 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 GOLGA8OA6NCC3 632 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 DUXAA6NLW8 204 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 SHISA9B4DS77 424 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 ZNF814B7Z6K7 855 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 E7EQL1 145 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 GOLGA8NF8WBI6 632 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 H7C417 338 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 GOLGA8RI6L899 631 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 SULT2B1O00204 365 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 KIAA0513O60268 411 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 EIF4E2O60573 245 aaKnown RBP4.88□□□□□ -1.63
DNMT1-220ENST00000589351 CYTIPO60759 359 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 TBX19O60806 448 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 MRPL33O75394 65 aaKnown RBP4.88□□□□□ -1.63
DNMT1-220ENST00000589351 NTN1O95631 604 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 ABHD16AO95870 558 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 CHEK2O96017 543 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 ERCC1P07992 297 aaPredicted RBP4.88□□□□□ -1.63
DNMT1-220ENST00000589351 CTAGE8P0CG41 777 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 UROSP10746 265 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 APEHP13798 732 aaKnown RBP4.88□□□□□ -1.63
DNMT1-220ENST00000589351 MALP21145 153 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 PCMT1P22061 227 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 CPT2P23786 658 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 PGM1P36871 562 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 MAP3K8P41279 467 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 SLC6A9P48067 706 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 CAMLGP49069 296 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 HTR6P50406 440 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 PDLIM4P50479 330 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 ATP12AP54707 1039 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 IRX1P78414 480 aaPredicted RBP4.88□□□□□ -1.63
DNMT1-220ENST00000589351 KCNJ10P78508 379 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 TGFBR3Q03167 851 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 CKAP4Q07065 602 aaKnown RBP4.88□□□□□ -1.63
DNMT1-220ENST00000589351 CAMK2DQ13557 499 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 CBFBQ13951 182 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 RNF151Q2KHN1 245 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 KRTAP24-1Q3LI83 254 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 IQCCQ4KMZ1 466 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 FBXW9Q5XUX1 488 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 C3orf33Q6P1S2 294 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 BHLHB9Q6PI77 547 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 TIFABQ6ZNK6 161 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 Q6ZPA2 131 aa4.88□□□□□ -1.63
DNMT1-220ENST00000589351 FAM90A1Q86YD7 464 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 1513.3 ms