RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 EGR4Q05215 589 aa11.88□□□□□ -0.51
HDAC5-208ENST00000588419 CCNIQ14094 377 aa11.88□□□□□ -0.51
HDAC5-208ENST00000588419 RGNQ15493 299 aa11.88□□□□□ -0.51
HDAC5-208ENST00000588419 EFNB3Q15768 340 aa11.88□□□□□ -0.51
HDAC5-208ENST00000588419 ADRM1Q16186 407 aa11.88□□□□□ -0.51
HDAC5-208ENST00000588419 ZSWIM7Q19AV6 140 aa11.88□□□□□ -0.51
HDAC5-208ENST00000588419 MAVSQ7Z434 540 aa11.88□□□□□ -0.51
HDAC5-208ENST00000588419 CDK20Q8IZL9 346 aa11.88□□□□□ -0.51
HDAC5-208ENST00000588419 MIER2Q8N344 545 aa11.88□□□□□ -0.51
HDAC5-208ENST00000588419 NFKBIDQ8NI38 313 aa11.88□□□□□ -0.51
HDAC5-208ENST00000588419 MAGEE2Q8TD90 523 aaPredicted RBP11.88□□□□□ -0.51
HDAC5-208ENST00000588419 CKAP2Q8WWK9 683 aa11.88□□□□□ -0.51
HDAC5-208ENST00000588419 SLC38A4Q969I6 547 aa11.88□□□□□ -0.51
HDAC5-208ENST00000588419 ZNF837Q96EG3 531 aaPredicted RBP11.88□□□□□ -0.51
HDAC5-208ENST00000588419 OXGR1Q96P68 337 aa11.88□□□□□ -0.51
HDAC5-208ENST00000588419 SNX18Q96RF0 628 aa11.88□□□□□ -0.51
HDAC5-208ENST00000588419 RAD21L1Q9H4I0 556 aa11.88□□□□□ -0.51
HDAC5-208ENST00000588419 THUMPD1Q9NXG2 353 aaKnown RBP11.88□□□□□ -0.51
HDAC5-208ENST00000588419 NKIRAS1Q9NYS0 192 aa11.88□□□□□ -0.51
HDAC5-208ENST00000588419 CRNNQ9UBG3 495 aaPredicted RBP11.88□□□□□ -0.51
HDAC5-208ENST00000588419 RCE1Q9Y256 329 aa11.88□□□□□ -0.51
HDAC5-208ENST00000588419 PCDHB14Q9Y5E9 798 aa11.88□□□□□ -0.51
HDAC5-208ENST00000588419 STAB1Q9NY15 2570 aa11.88□□□□□ -0.51
HDAC5-208ENST00000588419 IGHV2OR16-5A0A0B4J2B6 119 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 A0A1B0GWA3 101 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 VSTM5A8MXK1 200 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 CLIC1O00299 241 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 IGKV3-15P01624 115 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 IGLV1-44P01699 117 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 CBR1P16152 277 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 HTR2AP28223 471 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 IL2RGP31785 369 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 SRP14P37108 136 aaKnown RBP11.87□□□□□ -0.51
HDAC5-208ENST00000588419 CHN2P52757 468 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 STX1BP61266 288 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 HGFACQ04756 655 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 DAG1Q14118 895 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 TNFAIP8L3Q5GJ75 292 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 ALG10BQ5I7T1 473 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 PHYHD1Q5SRE7 291 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 FAM69AQ5T7M9 428 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 RINLQ6ZS11 566 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 MSANTD1Q6ZTZ1 278 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 UEVLDQ8IX04 471 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 C10orf53Q8N6V4 93 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 GOLGA6L1Q8N7Z2 621 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 ZNF540Q8NDQ6 660 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 PIK3C3Q8NEB9 887 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 NUP37Q8NFH4 326 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 TAAR8Q969N4 342 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 BOD1Q96IK1 185 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 MAELQ96JY0 434 aaKnown RBP11.87□□□□□ -0.51
HDAC5-208ENST00000588419 ANKRD27Q96NW4 1050 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 ZNF317Q96PQ6 595 aaPredicted RBP11.87□□□□□ -0.51
HDAC5-208ENST00000588419 EMC6Q9BV81 110 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 PAIP1Q9H074 479 aaKnown RBP11.87□□□□□ -0.51
HDAC5-208ENST00000588419 NARFLQ9H6Q4 476 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 NOX3Q9HBY0 568 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 MOV10Q9HCE1 1003 aaKnown RBP11.87□□□□□ -0.51
HDAC5-208ENST00000588419 A4GALTQ9NPC4 353 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 SELENONQ9NZV5 590 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 B3GAT1Q9P2W7 334 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 USP22Q9UPT9 525 aa11.87□□□□□ -0.51
HDAC5-208ENST00000588419 LYNX1G3V0Z9 82 aa11.86□□□□□ -0.51
HDAC5-208ENST00000588419 HLA-HP01893 362 aa11.86□□□□□ -0.51
HDAC5-208ENST00000588419 ADRA2AP08913 450 aa11.86□□□□□ -0.51
HDAC5-208ENST00000588419 LYNX1P0DP58 116 aa11.86□□□□□ -0.51
HDAC5-208ENST00000588419 IFNGR1P15260 489 aa11.86□□□□□ -0.51
HDAC5-208ENST00000588419 PAX7P23759 505 aa11.86□□□□□ -0.51
HDAC5-208ENST00000588419 ARR3P36575 388 aa11.86□□□□□ -0.51
HDAC5-208ENST00000588419 POU3F1Q03052 451 aaPredicted RBP11.86□□□□□ -0.51
HDAC5-208ENST00000588419 PIGFQ07326 219 aa11.86□□□□□ -0.51
HDAC5-208ENST00000588419 TRIP10Q15642 601 aa11.86□□□□□ -0.51
HDAC5-208ENST00000588419 C3orf36Q3SXR2 165 aa11.86□□□□□ -0.51
HDAC5-208ENST00000588419 GCNT6Q5T4J0 391 aa11.86□□□□□ -0.51
HDAC5-208ENST00000588419 CROCCP2Q86T23 111 aa11.86□□□□□ -0.51
HDAC5-208ENST00000588419 NEU4Q8WWR8 484 aaPredicted RBP11.86□□□□□ -0.51
HDAC5-208ENST00000588419 GTF2H4Q92759 462 aa11.86□□□□□ -0.51
HDAC5-208ENST00000588419 MS4A3Q96HJ5 214 aa11.86□□□□□ -0.51
HDAC5-208ENST00000588419 OR2M2Q96R28 347 aa11.86□□□□□ -0.51
HDAC5-208ENST00000588419 ZNF442Q9H7R0 627 aa11.86□□□□□ -0.51
HDAC5-208ENST00000588419 SDR39U1Q9NRG7 319 aaPredicted RBP11.86□□□□□ -0.51
HDAC5-208ENST00000588419 MED29Q9NX70 200 aa11.86□□□□□ -0.51
HDAC5-208ENST00000588419 SLC13A4Q9UKG4 626 aa11.86□□□□□ -0.51
HDAC5-208ENST00000588419 IGKV1D-42A0A075B6H8 117 aa11.85□□□□□ -0.51
HDAC5-208ENST00000588419 TRAV36DV7A0A075B6V5 113 aa11.85□□□□□ -0.51
HDAC5-208ENST00000588419 ZNF99A8MXY4 864 aaPredicted RBP11.85□□□□□ -0.51
HDAC5-208ENST00000588419 RPL36A-HNRNPH2H7BZ11 118 aa11.85□□□□□ -0.51
HDAC5-208ENST00000588419 TRAF3IP2O43734 574 aaPredicted RBP11.85□□□□□ -0.51
HDAC5-208ENST00000588419 OR2T1O43869 369 aa11.85□□□□□ -0.51
HDAC5-208ENST00000588419 ZNF432O94892 652 aa11.85□□□□□ -0.51
HDAC5-208ENST00000588419 HLA-DOBP13765 273 aa11.85□□□□□ -0.51
HDAC5-208ENST00000588419 HOXB1P14653 301 aaPredicted RBP11.85□□□□□ -0.51
HDAC5-208ENST00000588419 B4GALT1P15291 398 aa11.85□□□□□ -0.51
HDAC5-208ENST00000588419 TCN1P20061 433 aaPredicted RBP11.85□□□□□ -0.51
HDAC5-208ENST00000588419 AQP1P29972 269 aa11.85□□□□□ -0.51
HDAC5-208ENST00000588419 PTDSS1P48651 473 aaKnown RBP11.85□□□□□ -0.51
HDAC5-208ENST00000588419 RGS8P57771 180 aaPredicted RBP11.85□□□□□ -0.51
HDAC5-208ENST00000588419 MAGOHP61326 146 aaKnown RBP11.85□□□□□ -0.51
HDAC5-208ENST00000588419 FADDQ13158 208 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms