RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 DUSP7Q16829 419 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 TBRG1Q3YBR2 411 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 COQ5Q5HYK3 327 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 CARD17Q5XLA6 110 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 B3GLCTQ6Y288 498 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 TUBA1AQ71U36 451 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 SPATA21Q7Z572 469 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 PATL1Q86TB9 770 aaKnown RBP11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 DTX2Q86UW9 622 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 SLC30A8Q8IWU4 369 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 UEVLDQ8IX04 471 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 MUC15Q8N387 334 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 GPR137CQ8N3F9 429 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 OR8J3Q8NGG0 315 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 RCN3Q96D15 328 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 ADAD1Q96M93 576 aaKnown RBP11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 ARHGDIGQ99819 225 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 KCNS3Q9BQ31 491 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 ECSITQ9BQ95 431 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 CACNG6Q9BXT2 260 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 EVA1AQ9H8M9 152 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 CBLN4Q9NTU7 201 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 MRGBPQ9NV56 204 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 B3GAT1Q9P2W7 334 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 MOKQ9UQ07 419 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 B3GALT5Q9Y2C3 310 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 SETD2Q9BYW2 2564 aaPredicted RBP11.1□□□□□ -0.63
NPLOC4-213ENST00000573519 ATP6V1G2-DDX39BF2Z307 99 aa11.1□□□□□ -0.63
NPLOC4-213ENST00000573519 SSX4O60224 188 aa11.1□□□□□ -0.63
NPLOC4-213ENST00000573519 SERPINI2O75830 405 aa11.1□□□□□ -0.63
NPLOC4-213ENST00000573519 COX4I1P13073 169 aa11.1□□□□□ -0.63
NPLOC4-213ENST00000573519 DRD4P21917 467 aa11.1□□□□□ -0.63
NPLOC4-213ENST00000573519 PMS2P3Q13401 168 aa11.1□□□□□ -0.63
NPLOC4-213ENST00000573519 VMACQ2NL98 169 aa11.1□□□□□ -0.63
NPLOC4-213ENST00000573519 ENTPD8Q5MY95 495 aa11.1□□□□□ -0.63
NPLOC4-213ENST00000573519 INTS11Q5TA45 600 aaKnown RBP11.1□□□□□ -0.63
NPLOC4-213ENST00000573519 CALHM3Q86XJ0 350 aa11.1□□□□□ -0.63
NPLOC4-213ENST00000573519 TREML1Q86YW5 311 aa11.1□□□□□ -0.63
NPLOC4-213ENST00000573519 RBM45Q8IUH3 476 aaKnown RBP11.1□□□□□ -0.63
NPLOC4-213ENST00000573519 PCYOX1LQ8NBM8 494 aa11.1□□□□□ -0.63
NPLOC4-213ENST00000573519 MAPK1IP1LQ8NDC0 245 aa11.1□□□□□ -0.63
NPLOC4-213ENST00000573519 OR4D11Q8NGI4 311 aa11.1□□□□□ -0.63
NPLOC4-213ENST00000573519 OR6T1Q8NGN1 323 aa11.1□□□□□ -0.63
NPLOC4-213ENST00000573519 HTRA1Q92743 480 aa11.1□□□□□ -0.63
NPLOC4-213ENST00000573519 TAMM41Q96BW9 452 aa11.1□□□□□ -0.63
NPLOC4-213ENST00000573519 MOGAT1Q96PD6 335 aa11.1□□□□□ -0.63
NPLOC4-213ENST00000573519 SH3GL1Q99961 368 aa11.1□□□□□ -0.63
NPLOC4-213ENST00000573519 LINC00470Q9BZP3 86 aa11.1□□□□□ -0.63
NPLOC4-213ENST00000573519 BARX1Q9HBU1 254 aaPredicted RBP11.1□□□□□ -0.63
NPLOC4-213ENST00000573519 GID8Q9NWU2 228 aa11.1□□□□□ -0.63
NPLOC4-213ENST00000573519 GMPR2Q9P2T1 348 aaKnown RBP11.1□□□□□ -0.63
NPLOC4-213ENST00000573519 RCE1Q9Y256 329 aa11.1□□□□□ -0.63
NPLOC4-213ENST00000573519 CORINQ9Y5Q5 1042 aa11.1□□□□□ -0.63
NPLOC4-213ENST00000573519 IGHV1-18A0A0C4DH31 117 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 LRRN3E7EW58 273 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 MS4A18H0YCH9 400 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 M0R3G1 203 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 KPNA4O00629 521 aaPredicted RBP11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 SLC22A2O15244 555 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 CHP2O43745 196 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 CCDC22O60826 627 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 ZNF432O94892 652 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 HPRP00739 348 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 BGLAPP02818 100 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 C8BP07358 591 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 HLA-DOBP13765 273 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 CD247P20963 164 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 AHCYP23526 432 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 PCSK6P29122 969 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 LSP1P33241 339 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 CAPZA2P47755 286 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 NUDT6P53370 316 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 CRYBA2P53672 197 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 ARF1P84077 181 aaKnown RBP11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 POU3F1Q03052 451 aaPredicted RBP11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 NPTX1Q15818 432 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 NRF1Q16656 503 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 CEACAM16Q2WEN9 425 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 MS4A18Q3C1V0 323 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 SWT1Q5T5J6 900 aaKnown RBP11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 C1QTNF12Q5T7M4 302 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 ZNF544Q6NX49 715 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 ANKRD16Q6P6B7 361 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 ZNF613Q6PF04 617 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 TTC33Q6PID6 262 aaPredicted RBP11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 ADPRHL1Q8NDY3 354 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 PIK3C3Q8NEB9 887 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 RP9Q8TA86 221 aaKnown RBP11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 BCL2L2Q92843 193 aaPredicted RBP11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 ZNF583Q96ND8 569 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 SLC38A2Q96QD8 506 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 OR2M2Q96R28 347 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 EMC6Q9BV81 110 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 CRLF2Q9HC73 371 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 GPR35Q9HC97 309 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 OBP2BQ9NPH6 170 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 SLC7A7Q9UM01 511 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 ROS1P08922 2347 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 C2CD3Q4AC94 2353 aa11.09□□□□□ -0.63
NPLOC4-213ENST00000573519 TRAF3IP2O43734 574 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms