RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 OR14J1Q9UGF5 321 aa11.73□□□□□ -0.53
SYNM-203ENST00000560674 WIF1Q9Y5W5 379 aa11.73□□□□□ -0.53
SYNM-203ENST00000560674 MCRIP1C9JLW8 97 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 MRPL33O75394 65 aaKnown RBP11.72□□□□□ -0.53
SYNM-203ENST00000560674 OMGP23515 440 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 OR1D4P47884 311 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 MAT1AQ00266 395 aaKnown RBP11.72□□□□□ -0.53
SYNM-203ENST00000560674 FAPQ12884 760 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 SLX4IPQ5VYV7 408 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 FAM111BQ6SJ93 734 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 CD300LGQ6UXG3 332 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 NPSR1Q6W5P4 371 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 RBMS3Q6XE24 437 aaKnown RBP11.72□□□□□ -0.53
SYNM-203ENST00000560674 DPY19L2P2Q6ZN68 376 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 VASH1Q7L8A9 365 aaPredicted RBP11.72□□□□□ -0.53
SYNM-203ENST00000560674 SLC30A7Q8NEW0 376 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 OR52N1Q8NH53 320 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 ANKRD9Q96BM1 317 aaPredicted RBP11.72□□□□□ -0.53
SYNM-203ENST00000560674 UHRF2Q96PU4 802 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 WDR83Q9BRX9 315 aaKnown RBP11.72□□□□□ -0.53
SYNM-203ENST00000560674 STEAP1Q9UHE8 339 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 HS3ST2Q9Y278 367 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 MYH1P12882 1939 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 TRAV36DV7A0A075B6V5 113 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 NSG1A0A0A6YYJ2 146 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 A6NL46 340 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 AP1G1O43747 822 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 PAPLNO95428 1278 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 SRPXP78539 464 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 C19orf47Q8N9M1 422 aaKnown RBP11.72□□□□□ -0.53
SYNM-203ENST00000560674 TMEM255BQ8WV15 326 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 DUSP23Q9BVJ7 150 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 SGPP1Q9BX95 441 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 DDAH2O95865 285 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 ELK1P19419 428 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 LIPAP38571 399 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 THBS3P49746 956 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 CLDN17P56750 224 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 ALKBH1Q13686 389 aaKnown RBP11.72□□□□□ -0.53
SYNM-203ENST00000560674 TMEM176BQ3YBM2 270 aaPredicted RBP11.72□□□□□ -0.53
SYNM-203ENST00000560674 ALKAL1Q6UXT8 129 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 CREB3L2Q70SY1 520 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 GDF7Q7Z4P5 450 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 SLC51BQ86UW2 128 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 MISPQ8IVT2 679 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 RHBDD1Q8TEB9 315 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 MZB1Q8WU39 189 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 AMBRA1Q9C0C7 1298 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.72□□□□□ -0.53
SYNM-203ENST00000560674 PPP1R14DQ9NXH3 145 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 SLC23A2Q9UGH3 650 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 LRIT2A6NDA9 550 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 CYB5BO43169 146 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 CNR1P21554 472 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 BLVRBP30043 206 aaPredicted RBP11.72□□□□□ -0.53
SYNM-203ENST00000560674 S100A11P31949 105 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 PIGAP37287 484 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 ADPRMQ3LIE5 342 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 TMEFF1Q8IYR6 380 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 SLC22A24Q8N4F4 322 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 PHYHIPQ92561 330 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 TM4SF18Q96CE8 201 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 SLCO5A1Q9H2Y9 848 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 GHRLQ9UBU3 117 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 TRAPPC2LQ9UL33 140 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 A3GALT2U3KPV4 340 aa11.72□□□□□ -0.53
SYNM-203ENST00000560674 SCGB1D1O95968 90 aa11.71□□□□□ -0.53
SYNM-203ENST00000560674 CLEC2LP0C7M8 214 aa11.71□□□□□ -0.53
SYNM-203ENST00000560674 BMP1P13497 986 aa11.71□□□□□ -0.53
SYNM-203ENST00000560674 HSD17B7P56937 341 aa11.71□□□□□ -0.53
SYNM-203ENST00000560674 DEFA6Q01524 100 aa11.71□□□□□ -0.53
SYNM-203ENST00000560674 BDH1Q02338 343 aa11.71□□□□□ -0.53
SYNM-203ENST00000560674 IKZF1Q13422 519 aa11.71□□□□□ -0.53
SYNM-203ENST00000560674 KDM4DQ6B0I6 523 aa11.71□□□□□ -0.53
SYNM-203ENST00000560674 RABEPKQ7Z6M1 372 aa11.71□□□□□ -0.53
SYNM-203ENST00000560674 PPP1R3BQ86XI6 285 aa11.71□□□□□ -0.53
SYNM-203ENST00000560674 ISL2Q96A47 359 aa11.71□□□□□ -0.53
SYNM-203ENST00000560674 AMDHD1Q96NU7 426 aa11.71□□□□□ -0.53
SYNM-203ENST00000560674 SELENOIQ9C0D9 397 aa11.71□□□□□ -0.53
SYNM-203ENST00000560674 BOKQ9UMX3 212 aaPredicted RBP11.71□□□□□ -0.53
SYNM-203ENST00000560674 MYH13Q9UKX3 1938 aa11.71□□□□□ -0.53
SYNM-203ENST00000560674 A0A1B0GWA3 101 aa11.71□□□□□ -0.53
SYNM-203ENST00000560674 NAGAP17050 411 aa11.71□□□□□ -0.53
SYNM-203ENST00000560674 HBG1P69891 147 aa11.71□□□□□ -0.53
SYNM-203ENST00000560674 HBG2P69892 147 aa11.71□□□□□ -0.53
SYNM-203ENST00000560674 LPCAT3Q6P1A2 487 aa11.71□□□□□ -0.53
SYNM-203ENST00000560674 S100A7AQ86SG5 101 aa11.71□□□□□ -0.53
SYNM-203ENST00000560674 FUNDC1Q8IVP5 155 aa11.71□□□□□ -0.53
SYNM-203ENST00000560674 LINC01599Q8WXQ3 324 aa11.71□□□□□ -0.53
SYNM-203ENST00000560674 GLIPR2Q9H4G4 154 aa11.71□□□□□ -0.53
SYNM-203ENST00000560674 SCAF4O95104 1147 aaKnown RBP11.71□□□□□ -0.53
SYNM-203ENST00000560674 PTGER4P35408 488 aa11.71□□□□□ -0.53
SYNM-203ENST00000560674 GABRA2P47869 451 aa11.71□□□□□ -0.53
SYNM-203ENST00000560674 CCR6P51684 374 aa11.71□□□□□ -0.53
SYNM-203ENST00000560674 ATPAF1Q5TC12 328 aaPredicted RBP11.71□□□□□ -0.53
SYNM-203ENST00000560674 Q6ZTK2 550 aa11.71□□□□□ -0.53
SYNM-203ENST00000560674 BCDIN3DQ7Z5W3 292 aaKnown RBP11.71□□□□□ -0.53
SYNM-203ENST00000560674 CNEP1R1Q8N9A8 125 aa11.71□□□□□ -0.53
SYNM-203ENST00000560674 PLEKHM1Q9Y4G2 1056 aa11.71□□□□□ -0.53
SYNM-203ENST00000560674 ATP1B1P05026 303 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms