RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 KREMEN2Q8NCW0 462 aa16.11■□□□□ 0.17
RAB40C-205ENST00000539661 CCDC107Q8WV48 283 aa16.11■□□□□ 0.17
RAB40C-205ENST00000539661 LGR4Q9BXB1 951 aa16.11■□□□□ 0.17
RAB40C-205ENST00000539661 PIGMQ9H3S5 423 aa16.11■□□□□ 0.17
RAB40C-205ENST00000539661 POLE3Q9NRF9 147 aa16.11■□□□□ 0.17
RAB40C-205ENST00000539661 HCFC1R1Q9NWW0 138 aa16.11■□□□□ 0.17
RAB40C-205ENST00000539661 ZNF254O75437 659 aa16.1■□□□□ 0.17
RAB40C-205ENST00000539661 RORAP35398 523 aa16.1■□□□□ 0.17
RAB40C-205ENST00000539661 ELAVL3Q14576 367 aaKnown RBP16.1■□□□□ 0.17
RAB40C-205ENST00000539661 ZNF345Q14585 488 aa16.1■□□□□ 0.17
RAB40C-205ENST00000539661 HNRNPA1L2Q32P51 320 aaKnown RBP16.1■□□□□ 0.17
RAB40C-205ENST00000539661 ZNF684Q5T5D7 378 aa16.1■□□□□ 0.17
RAB40C-205ENST00000539661 ZCCHC12Q6PEW1 402 aa16.1■□□□□ 0.17
RAB40C-205ENST00000539661 COX18Q8N8Q8 333 aa16.1■□□□□ 0.17
RAB40C-205ENST00000539661 CDRT4Q8N9R6 151 aa16.1■□□□□ 0.17
RAB40C-205ENST00000539661 OR51L1Q8NGJ5 315 aa16.1■□□□□ 0.17
RAB40C-205ENST00000539661 GRHL3Q8TE85 626 aa16.1■□□□□ 0.17
RAB40C-205ENST00000539661 HSPA12BQ96MM6 686 aa16.1■□□□□ 0.17
RAB40C-205ENST00000539661 PMS2P2O95744 297 aa16.1■□□□□ 0.17
RAB40C-205ENST00000539661 PCCBP05166 539 aa16.1■□□□□ 0.17
RAB40C-205ENST00000539661 CMPK1P30085 196 aa16.1■□□□□ 0.17
RAB40C-205ENST00000539661 CSF2RBP32927 897 aa16.1■□□□□ 0.17
RAB40C-205ENST00000539661 STARP49675 285 aa16.1■□□□□ 0.17
RAB40C-205ENST00000539661 RPE65Q16518 533 aa16.1■□□□□ 0.17
RAB40C-205ENST00000539661 FHL5Q5TD97 284 aa16.1■□□□□ 0.17
RAB40C-205ENST00000539661 USP53Q70EK8 1073 aa16.1■□□□□ 0.17
RAB40C-205ENST00000539661 ZNF546Q86UE3 836 aa16.1■□□□□ 0.17
RAB40C-205ENST00000539661 LRRTM1Q86UE6 522 aa16.1■□□□□ 0.17
RAB40C-205ENST00000539661 KCNRGQ8N5I3 272 aa16.1■□□□□ 0.17
RAB40C-205ENST00000539661 SCPEP1Q9HB40 452 aa16.1■□□□□ 0.17
RAB40C-205ENST00000539661 ACTR10Q9NZ32 417 aa16.1■□□□□ 0.17
RAB40C-205ENST00000539661 UPB1Q9UBR1 384 aa16.1■□□□□ 0.17
RAB40C-205ENST00000539661 ENTPD2Q9Y5L3 495 aa16.1■□□□□ 0.17
RAB40C-205ENST00000539661 IER3IP1Q9Y5U9 82 aa16.1■□□□□ 0.17
RAB40C-205ENST00000539661 TRAV14DV4A0A0A6YYC5 116 aa16.09■□□□□ 0.17
RAB40C-205ENST00000539661 A0A1B0GWA3 101 aa16.09■□□□□ 0.17
RAB40C-205ENST00000539661 SYNDIG1LA6NDD5 238 aa16.09■□□□□ 0.17
RAB40C-205ENST00000539661 CD8AP01732 235 aa16.09■□□□□ 0.17
RAB40C-205ENST00000539661 TACSTD2P09758 323 aa16.09■□□□□ 0.17
RAB40C-205ENST00000539661 SCRN3Q0VDG4 424 aa16.09■□□□□ 0.17
RAB40C-205ENST00000539661 ZNF425Q6IV72 752 aa16.09■□□□□ 0.17
RAB40C-205ENST00000539661 ZNF227Q86WZ6 799 aa16.09■□□□□ 0.17
RAB40C-205ENST00000539661 LSRQ86X29 649 aaPredicted RBP16.09■□□□□ 0.17
RAB40C-205ENST00000539661 FLRT3Q9NZU0 649 aa16.09■□□□□ 0.17
RAB40C-205ENST00000539661 SLC27A6Q9Y2P4 619 aa16.09■□□□□ 0.17
RAB40C-205ENST00000539661 TRBV5-5A0A0J9YX44 114 aa16.09■□□□□ 0.17
RAB40C-205ENST00000539661 MOSPD3O75425 235 aa16.09■□□□□ 0.17
RAB40C-205ENST00000539661 ATG12O94817 140 aa16.09■□□□□ 0.17
RAB40C-205ENST00000539661 OR2F2O95006 317 aa16.09■□□□□ 0.17
RAB40C-205ENST00000539661 GP1BAP07359 652 aa16.09■□□□□ 0.17
RAB40C-205ENST00000539661 SPI1P17947 270 aa16.09■□□□□ 0.17
RAB40C-205ENST00000539661 ADRA2CP18825 462 aa16.09■□□□□ 0.17
RAB40C-205ENST00000539661 PRMT2P55345 433 aa16.09■□□□□ 0.17
RAB40C-205ENST00000539661 OR2F1Q13607 317 aa16.09■□□□□ 0.17
RAB40C-205ENST00000539661 ISXQ2M1V0 245 aa16.09■□□□□ 0.17
RAB40C-205ENST00000539661 C4orf46Q504U0 113 aa16.09■□□□□ 0.17
RAB40C-205ENST00000539661 ANKRD16Q6P6B7 361 aa16.09■□□□□ 0.17
RAB40C-205ENST00000539661 ANKRD33Q7Z3H0 272 aa16.09■□□□□ 0.17
RAB40C-205ENST00000539661 NPEPL1Q8NDH3 523 aa16.09■□□□□ 0.17
RAB40C-205ENST00000539661 RNF166Q96A37 237 aaPredicted RBP16.09■□□□□ 0.17
RAB40C-205ENST00000539661 RAB7BQ96AH8 199 aa16.09■□□□□ 0.17
RAB40C-205ENST00000539661 NMNAT2Q9BZQ4 307 aa16.09■□□□□ 0.17
RAB40C-205ENST00000539661 TRIM2Q9C040 744 aa16.09■□□□□ 0.17
RAB40C-205ENST00000539661 SEMA4CQ9C0C4 833 aa16.09■□□□□ 0.17
RAB40C-205ENST00000539661 ZBP1Q9H171 429 aa16.09■□□□□ 0.17
RAB40C-205ENST00000539661 SLC39A1Q9NY26 324 aa16.09■□□□□ 0.17
RAB40C-205ENST00000539661 A0A087WV62 115 aa16.08■□□□□ 0.17
RAB40C-205ENST00000539661 RAB19A4D1S5 217 aa16.08■□□□□ 0.17
RAB40C-205ENST00000539661 RASGRP1O95267 797 aa16.08■□□□□ 0.17
RAB40C-205ENST00000539661 TMIGD3P0DMS9 266 aaPredicted RBP16.08■□□□□ 0.17
RAB40C-205ENST00000539661 CPMP14384 443 aa16.08■□□□□ 0.17
RAB40C-205ENST00000539661 AK4P27144 223 aaPredicted RBP16.08■□□□□ 0.17
RAB40C-205ENST00000539661 UBE2MP61081 183 aaKnown RBP16.08■□□□□ 0.17
RAB40C-205ENST00000539661 PLAURQ03405 335 aa16.08■□□□□ 0.17
RAB40C-205ENST00000539661 FNDC3BQ53EP0 1204 aaKnown RBP16.08■□□□□ 0.17
RAB40C-205ENST00000539661 DPY19L2P2Q6ZN68 376 aa16.08■□□□□ 0.17
RAB40C-205ENST00000539661 OR52E1Q8NGJ3 308 aa16.08■□□□□ 0.17
RAB40C-205ENST00000539661 EXO5Q9H790 373 aa16.08■□□□□ 0.17
RAB40C-205ENST00000539661 SYNPO2LQ9H987 977 aa16.08■□□□□ 0.17
RAB40C-205ENST00000539661 FBXO34Q9NWN3 711 aa16.08■□□□□ 0.17
RAB40C-205ENST00000539661 STEAP1Q9UHE8 339 aa16.08■□□□□ 0.17
RAB40C-205ENST00000539661 NPIPA5A0A0B4J1W7 369 aa16.08■□□□□ 0.16
RAB40C-205ENST00000539661 KANTRA0A1W2PQU2 76 aa16.08■□□□□ 0.16
RAB40C-205ENST00000539661 GGT3PA6NGU5 568 aa16.08■□□□□ 0.16
RAB40C-205ENST00000539661 NPIPA7E9PJI5 369 aa16.08■□□□□ 0.16
RAB40C-205ENST00000539661 BRINP1O60477 761 aa16.08■□□□□ 0.16
RAB40C-205ENST00000539661 ZNF432O94892 652 aa16.08■□□□□ 0.16
RAB40C-205ENST00000539661 NGFRP08138 427 aa16.08■□□□□ 0.16
RAB40C-205ENST00000539661 NPIPA8P0DM63 369 aa16.08■□□□□ 0.16
RAB40C-205ENST00000539661 CSRP1P21291 193 aaKnown RBP16.08■□□□□ 0.16
RAB40C-205ENST00000539661 SRSF4Q08170 494 aaKnown RBP16.08■□□□□ 0.16
RAB40C-205ENST00000539661 DHCR24Q15392 516 aa16.08■□□□□ 0.16
RAB40C-205ENST00000539661 TRMT12Q53H54 448 aaKnown RBP16.08■□□□□ 0.16
RAB40C-205ENST00000539661 TMPRSS12Q86WS5 348 aa16.08■□□□□ 0.16
RAB40C-205ENST00000539661 OR51S1Q8NGJ8 323 aa16.08■□□□□ 0.16
RAB40C-205ENST00000539661 MYOZ1Q9NP98 299 aaPredicted RBP16.08■□□□□ 0.16
RAB40C-205ENST00000539661 MLXQ9UH92 298 aa16.08■□□□□ 0.16
RAB40C-205ENST00000539661 GPN3Q9UHW5 284 aaPredicted RBP16.08■□□□□ 0.16
RAB40C-205ENST00000539661 IDSB3KWA1 339 aa16.07■□□□□ 0.16
RAB40C-205ENST00000539661 ARPC3O15145 178 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms