RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 ARFGEF3Q5TH69 2177 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 A0A1W2PRB8 838 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 TLDC2A0PJX2 215 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 LRRC53A6NM62 1247 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 TRIM49D1C9J1S8 452 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 E7EVH7 732 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 RNASEK-C17orf49H0YIS7 233 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 FOXE1O00358 373 aaPredicted RBP3.22□□□□□ -1.89
YBX3-205ENST00000536107 CYTIPO60759 359 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 KRT33AO76009 404 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 WDR47O94967 919 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 VAPBO95292 243 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 ANGPTL1O95841 491 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 RBMY1A1P0DJD3 496 aaKnown RBP3.22□□□□□ -1.89
YBX3-205ENST00000536107 PPIAL4GP0DN37 164 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 PCNAP12004 261 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 PORP16435 677 aaPredicted RBP3.22□□□□□ -1.89
YBX3-205ENST00000536107 UQCRC2P22695 453 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 CDKN2BP42772 138 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 CRYBB2P43320 205 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 IER3P46695 156 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 EVX1P49640 407 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 SELENOVP59797 346 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 EIF3EP60228 445 aaKnown RBP3.22□□□□□ -1.89
YBX3-205ENST00000536107 POU3F1Q03052 451 aaPredicted RBP3.22□□□□□ -1.89
YBX3-205ENST00000536107 ACVR1Q04771 509 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 SLC3A1Q07837 685 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 NPRL3Q12980 569 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 RAB39AQ14964 217 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 TSTQ16762 297 aaKnown RBP3.22□□□□□ -1.89
YBX3-205ENST00000536107 HIST2H2ACQ16777 129 aaPredicted RBP3.22□□□□□ -1.89
YBX3-205ENST00000536107 PCGF3Q3KNV8 242 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 GRAMD1BQ3KR37 738 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 ADPRMQ3LIE5 342 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 MMEL1Q495T6 779 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 TMEM35AQ53FP2 167 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 KHDRBS2Q5VWX1 349 aaKnown RBP3.22□□□□□ -1.89
YBX3-205ENST00000536107 HIST2H2AA3Q6FI13 130 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 OR4C11Q6IEV9 310 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 OR52E8Q6IFG1 317 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 LRRC8EQ6NSJ5 796 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 Q6ZWC4 215 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 RAPH1Q70E73 1250 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 NR2C2APQ86WQ0 139 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 SBSPONQ8IVN8 264 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 VSTM4Q8IW00 320 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 SLC44A2Q8IWA5 706 aaPredicted RBP3.22□□□□□ -1.89
YBX3-205ENST00000536107 RPP25LQ8N5L8 163 aaKnown RBP3.22□□□□□ -1.89
YBX3-205ENST00000536107 RNF10Q8N5U6 811 aaKnown RBP3.22□□□□□ -1.89
YBX3-205ENST00000536107 PAPD5Q8NDF8 572 aaKnown RBP3.22□□□□□ -1.89
YBX3-205ENST00000536107 OR4K14Q8NGD5 310 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 C8orf46Q8TAG6 207 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 ZFP90Q8TF47 636 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 EEF1AKMT1Q8WVE0 214 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 FBXL8Q96CD0 374 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 CCDC126Q96EE4 140 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 SH3YL1Q96HL8 342 aaPredicted RBP3.22□□□□□ -1.89
YBX3-205ENST00000536107 C3orf30Q96M34 536 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 PRR25Q96S07 402 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 NPAS1Q99742 590 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 EGFL8Q99944 293 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 CENPKQ9BS16 269 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 PCGF1Q9BSM1 259 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 TRIM15Q9C019 465 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 MYLK2Q9H1R3 596 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 ZNF385DQ9H6B1 395 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 CRLF2Q9HC73 371 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 ACOXLQ9NUZ1 547 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 MED17Q9NVC6 651 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 EXD2Q9NVH0 621 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 FLRT3Q9NZU0 649 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 MALT1Q9UDY8 824 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.22□□□□□ -1.89
YBX3-205ENST00000536107 TRMT6Q9UJA5 497 aaKnown RBP3.22□□□□□ -1.89
YBX3-205ENST00000536107 VPREB3Q9UKI3 123 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 RIMKLBQ9ULI2 386 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 DHRS7Q9Y394 339 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 LSM4Q9Y4Z0 139 aaKnown RBP3.22□□□□□ -1.89
YBX3-205ENST00000536107 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.22□□□□□ -1.89
YBX3-205ENST00000536107 CACNG2Q9Y698 323 aa3.22□□□□□ -1.89
YBX3-205ENST00000536107 A0A096LPK6 155 aa3.21□□□□□ -1.9
YBX3-205ENST00000536107 IGHV2OR16-5A0A0B4J2B6 119 aa3.21□□□□□ -1.9
YBX3-205ENST00000536107 H0YHG0 523 aa3.21□□□□□ -1.9
YBX3-205ENST00000536107 NR5A2O00482 541 aa3.21□□□□□ -1.9
YBX3-205ENST00000536107 ZNF195O14628 629 aa3.21□□□□□ -1.9
YBX3-205ENST00000536107 ACOT8O14734 319 aa3.21□□□□□ -1.9
YBX3-205ENST00000536107 PGRMC2O15173 223 aa3.21□□□□□ -1.9
YBX3-205ENST00000536107 SPOPO43791 374 aa3.21□□□□□ -1.9
YBX3-205ENST00000536107 FADS1O60427 444 aa3.21□□□□□ -1.9
YBX3-205ENST00000536107 RAMP3O60896 148 aa3.21□□□□□ -1.9
YBX3-205ENST00000536107 NME6O75414 186 aaPredicted RBP3.21□□□□□ -1.9
YBX3-205ENST00000536107 METTL18O95568 372 aa3.21□□□□□ -1.9
YBX3-205ENST00000536107 NUDT14O95848 222 aa3.21□□□□□ -1.9
YBX3-205ENST00000536107 TBX6O95947 436 aaPredicted RBP3.21□□□□□ -1.9
YBX3-205ENST00000536107 CHEK2O96017 543 aa3.21□□□□□ -1.9
YBX3-205ENST00000536107 CHRM4P08173 479 aa3.21□□□□□ -1.9
YBX3-205ENST00000536107 FAM58BPP0C7Q3 252 aa3.21□□□□□ -1.9
YBX3-205ENST00000536107 UROSP10746 265 aa3.21□□□□□ -1.9
YBX3-205ENST00000536107 CPMP14384 443 aa3.21□□□□□ -1.9
YBX3-205ENST00000536107 PAX7P23759 505 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms