RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 SDHAP31040 664 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 RCVRNP35243 200 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 ARL3P36405 182 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 P2RY4P51582 365 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 GNGT1P63211 74 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 HSF1Q00613 529 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 RBPJQ06330 500 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 IL24Q13007 206 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 FLOT2Q14254 428 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 RGNQ15493 299 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 KLHL26Q53HC5 615 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 TEX30Q5JUR7 227 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 FAM69AQ5T7M9 428 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 TTC33Q6PID6 262 aaPredicted RBP5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 Q6ZPB1 254 aaPredicted RBP5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 TRILQ7L0X0 811 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 PIGWQ7Z7B1 504 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 LYSMD2Q8IV50 215 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 TUSC5Q8IXB3 177 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 MSRB3Q8IXL7 192 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 TIGD4Q8IY51 512 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 FADS6Q8N9I5 356 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 OR13C2Q8NGS9 318 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 THRSPQ92748 146 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 ROPN1LQ96C74 230 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 ZG16BQ96DA0 208 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 LRRC46Q96FV0 321 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 AURKBQ96GD4 344 aaPredicted RBP5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 THUMPD3Q9BV44 507 aaKnown RBP5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 KRTAP9-2Q9BYQ4 174 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 TBL1XR1Q9BZK7 514 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 NMUR2Q9GZQ4 415 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 ZNF350Q9GZX5 532 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 OR51B6Q9H340 312 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 LDAHQ9H6V9 325 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 HHATLQ9HCP6 504 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 NRIP3Q9NQ35 241 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 C19orf12Q9NSK7 152 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 TAS2R10Q9NYW0 307 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 MED11Q9P086 117 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 VAPAQ9P0L0 249 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 B4GALT7Q9UBV7 327 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 KCNE5Q9UJ90 142 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 LEF1Q9UJU2 399 aaPredicted RBP5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 MKLN1Q9UL63 735 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 LIPT1Q9Y234 373 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 OSGIN2Q9Y236 505 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 SHANK1Q9Y566 2161 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 NINQ8N4C6 2090 aa5.67□□□□□ -1.5
ATPAF1-209ENST00000529214 IGLV3-32A0A0A0MS00 114 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 TRGV5A0A0B4J1U4 118 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 NPIPA5A0A0B4J1W7 369 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 hCG_1809904A0A1W2PP81 198 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 A0A1W2PPE2 198 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 A0A1W2PR64 198 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 A4D1N5 150 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 OR14I1A6ND48 311 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 MFSD2BA6NFX1 497 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 ADARB2-AS1A8MUL3 147 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 LINC00587B1AMM8 73 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 NPIPA7E9PJI5 369 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 CCRL2O00421 344 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 SLC22A2O15244 555 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 ZNHIT1O43257 154 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 ZIC3O60481 467 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 CDC40O60508 579 aaKnown RBP eCLIP5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 SLC19A2O60779 497 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 UGT2B17O75795 530 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 ACTL6BO94805 426 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 CCNB2O95067 398 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 KRT8P05787 483 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 RNF224P0DH78 156 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 NPIPA8P0DM63 369 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 ETFAP13804 333 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 GPX2P18283 190 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 SRD5A2P31213 254 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 DCTP40126 519 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 CD79BP40259 229 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 CRATP43155 626 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 KIR3DL2P43630 455 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 KHKP50053 298 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 DSCR4P56555 118 aaPredicted RBP5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 SRSF1Q07955 248 aaKnown RBP eCLIP5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 FUT5Q11128 374 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 STX5Q13190 355 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 GPR68Q15743 365 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 MAPK11Q15759 364 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 ZNF141Q15928 474 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 SSX2Q16385 188 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 SYPL1Q16563 259 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 GXYLT1Q4G148 440 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 FLYWCH1Q4VC44 716 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 RUNDC3AQ59EK9 446 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 LCN1P1Q5VSP4 162 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 STEAP3Q658P3 488 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 TYW3Q6IPR3 259 aaKnown RBP5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 LRRC74BQ6ZQY2 392 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 OLIG3Q7RTU3 272 aa5.66□□□□□ -1.5
ATPAF1-209ENST00000529214 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms