RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 VKORC1Q9BQB6 163 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 UCK2Q9BZX2 261 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 ENKD1Q9H0I2 346 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 GABARAPL1Q9H0R8 117 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 OR52D1Q9H346 318 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 RNF122Q9H9V4 155 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 RNPEPL1Q9HAU8 725 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 KLHL9Q9P2J3 617 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 B3GAT1Q9P2W7 334 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 STX18Q9P2W9 335 aaKnown RBP12.21□□□□□ -0.45
CD44-224ENST00000526669 ING1Q9UK53 422 aaPredicted RBP12.21□□□□□ -0.45
CD44-224ENST00000526669 SIGLEC7Q9Y286 467 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 B3GALT5Q9Y2C3 310 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 HIF3AQ9Y2N7 669 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 A0A0G2JNJ9 132 aa12.2□□□□□ -0.46
CD44-224ENST00000526669 A0A1W2PNV4 684 aa12.2□□□□□ -0.46
CD44-224ENST00000526669 HTR3EA5X5Y0 456 aa12.2□□□□□ -0.46
CD44-224ENST00000526669 MCIDASD6RGH6 385 aa12.2□□□□□ -0.46
CD44-224ENST00000526669 EI24O14681 340 aa12.2□□□□□ -0.46
CD44-224ENST00000526669 MGRN1O60291 552 aa12.2□□□□□ -0.46
CD44-224ENST00000526669 PTP4A3O75365 173 aa12.2□□□□□ -0.46
CD44-224ENST00000526669 ATP6V1G2O95670 118 aa12.2□□□□□ -0.46
CD44-224ENST00000526669 TP53P04637 393 aaPredicted RBP12.2□□□□□ -0.46
CD44-224ENST00000526669 ZNF43P17038 809 aa12.2□□□□□ -0.46
CD44-224ENST00000526669 PEX2P28328 305 aa12.2□□□□□ -0.46
CD44-224ENST00000526669 AGTR1P30556 359 aa12.2□□□□□ -0.46
CD44-224ENST00000526669 CLDN17P56750 224 aa12.2□□□□□ -0.46
CD44-224ENST00000526669 CTXN1P60606 82 aa12.2□□□□□ -0.46
CD44-224ENST00000526669 RPS4XP62701 263 aaKnown RBP12.2□□□□□ -0.46
CD44-224ENST00000526669 C1DQ13901 141 aaKnown RBP12.2□□□□□ -0.46
CD44-224ENST00000526669 SLC17A1Q14916 467 aa12.2□□□□□ -0.46
CD44-224ENST00000526669 RNPS1Q15287 305 aaKnown RBP12.2□□□□□ -0.46
CD44-224ENST00000526669 ALG10Q5BKT4 473 aa12.2□□□□□ -0.46
CD44-224ENST00000526669 TMEM211Q6ICI0 200 aa12.2□□□□□ -0.46
CD44-224ENST00000526669 FAHD1Q6P587 224 aa12.2□□□□□ -0.46
CD44-224ENST00000526669 VWA1Q6PCB0 445 aa12.2□□□□□ -0.46
CD44-224ENST00000526669 ZNF620Q6ZNG0 422 aa12.2□□□□□ -0.46
CD44-224ENST00000526669 NUFIP2Q7Z417 695 aaKnown RBP12.2□□□□□ -0.46
CD44-224ENST00000526669 CCDC71Q8IV32 467 aaPredicted RBP12.2□□□□□ -0.46
CD44-224ENST00000526669 CBR4Q8N4T8 237 aa12.2□□□□□ -0.46
CD44-224ENST00000526669 OR8D4Q8NGM9 314 aa12.2□□□□□ -0.46
CD44-224ENST00000526669 TXNDC15Q96J42 360 aa12.2□□□□□ -0.46
CD44-224ENST00000526669 ZNF385AQ96PM9 386 aaKnown RBP12.2□□□□□ -0.46
CD44-224ENST00000526669 PLA2G12AQ9BZM1 189 aa12.2□□□□□ -0.46
CD44-224ENST00000526669 C12orf49Q9H741 205 aa12.2□□□□□ -0.46
CD44-224ENST00000526669 ZNF556Q9HAH1 456 aa12.2□□□□□ -0.46
CD44-224ENST00000526669 INIPQ9NRY2 104 aa12.2□□□□□ -0.46
CD44-224ENST00000526669 TBC1D23Q9NUY8 699 aa12.2□□□□□ -0.46
CD44-224ENST00000526669 MED29Q9NX70 200 aa12.2□□□□□ -0.46
CD44-224ENST00000526669 Q9UFV3 132 aa12.2□□□□□ -0.46
CD44-224ENST00000526669 FLVCR1Q9Y5Y0 555 aa12.2□□□□□ -0.46
CD44-224ENST00000526669 FLNCQ14315 2725 aa12.2□□□□□ -0.46
CD44-224ENST00000526669 HEATR1Q9H583 2144 aaKnown RBP12.19□□□□□ -0.46
CD44-224ENST00000526669 TRAF3IP2O43734 574 aaPredicted RBP12.19□□□□□ -0.46
CD44-224ENST00000526669 NDUFB2O95178 105 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 RCBTB2O95199 551 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 PPP1R3DO95685 299 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 TSPAN19P0C672 248 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 PLA2G2AP14555 144 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 IGFBP5P24593 272 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 EDNRAP25101 427 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 POU1F1P28069 291 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 CEACAM8P31997 349 aaPredicted RBP12.19□□□□□ -0.46
CD44-224ENST00000526669 TIMP3P35625 211 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 RPL4P36578 427 aaKnown RBP12.19□□□□□ -0.46
CD44-224ENST00000526669 ERVK-25P63136 954 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 ADORA2A-AS1P86434 159 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 ZP4Q12836 540 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 DAG1Q14118 895 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 C4orf17Q53FE4 359 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 CLEC12AQ5QGZ9 265 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 TMEM201Q5SNT2 666 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 RIPPLY2Q5TAB7 128 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 GTF2IRD2BQ6EKJ0 949 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 OR2A2Q6IF42 318 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 SMARCD3Q6STE5 483 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 CASP12Q6UXS9 341 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 RASSF6Q6ZTQ3 369 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 CREB3L2Q70SY1 520 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 SLC35D2Q76EJ3 337 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 GTF2IRD2Q86UP8 949 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 WDFY1Q8IWB7 410 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 LRRC75AQ8NAA5 344 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 RND1Q92730 232 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 EME1Q96AY2 570 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 CCDC120Q96HB5 630 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 GMPPAQ96IJ6 420 aaPredicted RBP12.19□□□□□ -0.46
CD44-224ENST00000526669 SLC29A1Q99808 456 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 C9orf16Q9BUW7 83 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 EMC6Q9BV81 110 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 KRT84Q9NSB2 600 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 REV1Q9UBZ9 1251 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 TMEFF2Q9UIK5 374 aaPredicted RBP12.19□□□□□ -0.46
CD44-224ENST00000526669 RNF6Q9Y252 685 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 NOSIPQ9Y314 301 aaKnown RBP12.19□□□□□ -0.46
CD44-224ENST00000526669 CDH10Q9Y6N8 788 aa12.19□□□□□ -0.46
CD44-224ENST00000526669 IGKV3D-15A0A087WSY6 115 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 A0A1B0GUH1 482 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 A0A1W2PRG6 482 aa12.18□□□□□ -0.46
CD44-224ENST00000526669 H3BN98 237 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms