RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 ZSWIM2Q8NEG5 633 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 OR10G3Q8NGC4 313 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 OR10J5Q8NHC4 309 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 TMEM106AQ96A25 262 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 FRG2BQ96QU4 278 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 SLC25A33Q9BSK2 321 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 DPH7Q9BTV6 452 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 CTDSP1Q9GZU7 261 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 SUV39H2Q9H5I1 410 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 FBXL12Q9NXK8 326 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 TRAPPC2LQ9UL33 140 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 IQGAP1P46940 1657 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 TMEM221A6NGB7 291 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 FIGNL2A6NMB9 653 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 TMEM212A6NML5 194 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 DVL2O14641 736 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 INHAP05111 366 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 IFI30P13284 250 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 HNRNPA2B1P22626 353 aaKnown RBP5.07□□□□□ -1.6
USF3-202ENST00000478658 CTU2Q2VPK5 515 aaKnown RBP5.07□□□□□ -1.6
USF3-202ENST00000478658 TRIM61Q5EBN2 209 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 WDR74Q6RFH5 385 aaPredicted RBP5.07□□□□□ -1.6
USF3-202ENST00000478658 CAMKMTQ7Z624 323 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 FJX1Q86VR8 437 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 TRMT2AQ8IZ69 625 aaKnown RBP5.07□□□□□ -1.6
USF3-202ENST00000478658 TSGA13Q96PP4 275 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 TP53RKQ96S44 253 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 RSG1Q9BU20 258 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 TMEM147Q9BVK8 224 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 WASH6PQ9NQA3 447 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 OR6C3Q9NZP0 311 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 ANKRD36CQ5JPF3 1778 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 SOWAHBA6NEL2 793 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 HTRA2O43464 458 aaPredicted RBP5.07□□□□□ -1.6
USF3-202ENST00000478658 OR2B3O76000 313 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 PTBP3O95758 552 aaKnown RBP5.07□□□□□ -1.6
USF3-202ENST00000478658 S1PR4O95977 384 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 ACSM4P0C7M7 580 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 MYOGP15173 224 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 AZGP1P25311 298 aaKnown RBP5.07□□□□□ -1.6
USF3-202ENST00000478658 FNTBP49356 437 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 CDKN2DP55273 166 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 DUSP6Q16828 381 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 GTDC1Q4AE62 458 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 C6orf201Q7Z4U5 140 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 LRRC18Q8N456 261 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 OR4A4PQ8NGN8 299 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 OR9A1PQ8NGU1 263 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 PRAP1Q96NZ9 151 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 BOCQ9BWV1 1114 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 ACPTQ9BZG2 426 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 DEFB129Q9H1M3 183 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 OR51I1Q9H343 314 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 SLC23A1Q9UHI7 598 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 ZDHHC2Q9UIJ5 367 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 LSM5Q9Y4Y9 91 aaKnown RBP5.07□□□□□ -1.6
USF3-202ENST00000478658 OR1A2Q9Y585 309 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 COL5A2P05997 1499 aaPredicted RBP5.07□□□□□ -1.6
USF3-202ENST00000478658 ANKRD61A6NGH8 418 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 GRXCR1A8MXD5 290 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 UPK3BL1B0FP48 263 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 UPK3BL2E5RIL1 263 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 K7EQS6 105 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 ARPC3O15145 178 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 GALR3O60755 368 aaPredicted RBP5.07□□□□□ -1.6
USF3-202ENST00000478658 PDGFBP01127 241 aaPredicted RBP5.07□□□□□ -1.6
USF3-202ENST00000478658 FABP4P15090 132 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 OPRK1P41145 380 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 ETV4P43268 484 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 SLC35B1P78383 322 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 LTBQ06643 244 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 TEAD2Q15562 447 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 OR5A2Q8NGI9 324 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 C2CD4CQ8TF44 421 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 TSLPQ969D9 159 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 NSUN5Q96P11 429 aaKnown RBP5.07□□□□□ -1.6
USF3-202ENST00000478658 ABHD6Q9BV23 337 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 GON7Q9BXV9 100 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 GPR87Q9BY21 358 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 PREBQ9HCU5 417 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 ASIC5Q9NY37 505 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 SPATA31A1Q5TZJ5 1347 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 HEATR5BQ9P2D3 2071 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 FAM183AA6NL82 134 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 FOXO6A8MYZ6 492 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 G3V3Q6 166 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 M0R296 226 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 BANF1O75531 89 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 CLDN1O95832 211 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 HNRNPA1P09651 372 aaKnown RBP eCLIP5.07□□□□□ -1.6
USF3-202ENST00000478658 ATP4BP51164 291 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 SKP2Q13309 424 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 UBAP2LQ14157 1087 aaKnown RBP5.07□□□□□ -1.6
USF3-202ENST00000478658 RPEL1Q2QD12 228 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 LPCAT4Q643R3 524 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 LCN8Q6JVE9 175 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 PLPP6Q8IY26 295 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 OR1L4Q8NGR5 311 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 OR2G2Q8NGZ5 317 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 OR14A16Q8NHC5 309 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms