RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 ODF3L2Q3SX64 289 aa5.86□□□□□ -1.47
LRCH3-215ENST00000476664 SLC25A52Q3SY17 297 aa5.86□□□□□ -1.47
LRCH3-215ENST00000476664 SPATS1Q496A3 300 aa5.86□□□□□ -1.47
LRCH3-215ENST00000476664 TP53I3Q53FA7 332 aa5.86□□□□□ -1.47
LRCH3-215ENST00000476664 SIRPB2Q5JXA9 342 aa5.86□□□□□ -1.47
LRCH3-215ENST00000476664 SPECC1LQ69YQ0 1117 aa5.86□□□□□ -1.47
LRCH3-215ENST00000476664 TMEM207Q6UWW9 146 aa5.86□□□□□ -1.47
LRCH3-215ENST00000476664 SNX20Q7Z614 316 aa5.86□□□□□ -1.47
LRCH3-215ENST00000476664 TSEN54Q7Z6J9 526 aaKnown RBP5.86□□□□□ -1.47
LRCH3-215ENST00000476664 KBTBD3Q8NAB2 608 aa5.86□□□□□ -1.47
LRCH3-215ENST00000476664 OR4A15Q8NGL6 344 aa5.86□□□□□ -1.47
LRCH3-215ENST00000476664 OR4A4PQ8NGN8 299 aa5.86□□□□□ -1.47
LRCH3-215ENST00000476664 OR1L3Q8NH93 324 aa5.86□□□□□ -1.47
LRCH3-215ENST00000476664 APOBEC4Q8WW27 367 aaKnown RBP5.86□□□□□ -1.47
LRCH3-215ENST00000476664 ING5Q8WYH8 240 aa5.86□□□□□ -1.47
LRCH3-215ENST00000476664 MBOAT4Q96T53 435 aa5.86□□□□□ -1.47
LRCH3-215ENST00000476664 NKX3-1Q99801 234 aaPredicted RBP5.86□□□□□ -1.47
LRCH3-215ENST00000476664 SLC29A1Q99808 456 aa5.86□□□□□ -1.47
LRCH3-215ENST00000476664 NIPSNAP3BQ9BS92 247 aa5.86□□□□□ -1.47
LRCH3-215ENST00000476664 FRMD8P1Q9BZ68 369 aaPredicted RBP5.86□□□□□ -1.47
LRCH3-215ENST00000476664 PRSS22Q9GZN4 317 aa5.86□□□□□ -1.47
LRCH3-215ENST00000476664 RBM38Q9H0Z9 239 aaKnown RBP5.86□□□□□ -1.47
LRCH3-215ENST00000476664 POPDC2Q9HBU9 364 aa5.86□□□□□ -1.47
LRCH3-215ENST00000476664 ADAP2Q9NPF8 381 aa5.86□□□□□ -1.47
LRCH3-215ENST00000476664 CLN8Q9UBY8 286 aa5.86□□□□□ -1.47
LRCH3-215ENST00000476664 MTRF1LQ9UGC7 380 aaKnown RBP5.86□□□□□ -1.47
LRCH3-215ENST00000476664 INSL5Q9Y5Q6 135 aa5.86□□□□□ -1.47
LRCH3-215ENST00000476664 ATRQ13535 2644 aa5.86□□□□□ -1.47
LRCH3-215ENST00000476664 FN1P02751 2386 aaKnown RBP5.85□□□□□ -1.47
LRCH3-215ENST00000476664 NEDD4P46934 1319 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 CCT8L1PA6NM43 557 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 A8MUA0 341 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 A8MXQ7 604 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 TNFRSF13BO14836 293 aaPredicted RBP5.85□□□□□ -1.47
LRCH3-215ENST00000476664 TM9SF1O15321 606 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 PPIHO43447 177 aaKnown RBP5.85□□□□□ -1.47
LRCH3-215ENST00000476664 EFNA2O43921 213 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 AP2A1O95782 977 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 NR3C1P04150 777 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 SERPINE2P07093 398 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 SLC2A2P11168 524 aaPredicted RBP5.85□□□□□ -1.47
LRCH3-215ENST00000476664 BCKDHBP21953 392 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 ATP5A1P25705 553 aaKnown RBP5.85□□□□□ -1.47
LRCH3-215ENST00000476664 GCAP28676 217 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 LCN1P31025 176 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 PLTPP55058 493 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 RBBP4Q09028 425 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 RIPPLY1Q0D2K3 151 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 Q0VFX4 171 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 PPP1R3AQ16821 1122 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 XKR4Q5GH76 650 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 C9orf135Q5VTT2 229 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 OR52W1Q6IF63 320 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 SLC18B1Q6NT16 456 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 CCDC137Q6PK04 289 aaKnown RBP5.85□□□□□ -1.47
LRCH3-215ENST00000476664 OLFML1Q6UWY5 402 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 ISCA2Q86U28 154 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 RBM45Q8IUH3 476 aaKnown RBP5.85□□□□□ -1.47
LRCH3-215ENST00000476664 NKAIN4Q8IVV8 208 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 OR4N5Q8IXE1 308 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 PRR26Q8N8Z3 221 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 OR51L1Q8NGJ5 315 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 OR6F1Q8NGZ6 308 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 GPR151Q8TDV0 419 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 UBE2E3Q969T4 207 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 FOXN4Q96NZ1 517 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 CLCC1Q96S66 551 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 MAPKAP1Q9BPZ7 522 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 C19orf43Q9BQ61 176 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 LRRC1Q9BTT6 524 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 PITPNM3Q9BZ71 974 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 CSNK1G1Q9HCP0 422 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 NANSQ9NR45 359 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 SIGLEC8Q9NYZ4 499 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 PHF11Q9UIL8 331 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 GMPPBQ9Y5P6 360 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 MYLKQ15746 1914 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 CEP192Q8TEP8 1941 aa5.85□□□□□ -1.47
LRCH3-215ENST00000476664 FANCIQ9NVI1 1328 aa5.84□□□□□ -1.47
LRCH3-215ENST00000476664 A0A1W2PPV9 198 aa5.84□□□□□ -1.47
LRCH3-215ENST00000476664 PLSCR5A0PG75 271 aa5.84□□□□□ -1.47
LRCH3-215ENST00000476664 OR6C65A6NJZ3 312 aa5.84□□□□□ -1.47
LRCH3-215ENST00000476664 KHDRBS3O75525 346 aaKnown RBP5.84□□□□□ -1.47
LRCH3-215ENST00000476664 SP1P08047 785 aa5.84□□□□□ -1.47
LRCH3-215ENST00000476664 UBCP0CG48 685 aaKnown RBP5.84□□□□□ -1.47
LRCH3-215ENST00000476664 MYL2P10916 166 aa5.84□□□□□ -1.47
LRCH3-215ENST00000476664 LIFP15018 202 aa5.84□□□□□ -1.47
LRCH3-215ENST00000476664 IFNA8P32881 189 aa5.84□□□□□ -1.47
LRCH3-215ENST00000476664 RPL4P36578 427 aaKnown RBP5.84□□□□□ -1.47
LRCH3-215ENST00000476664 GLUD2P49448 558 aa5.84□□□□□ -1.47
LRCH3-215ENST00000476664 HOXA1P49639 335 aaPredicted RBP5.84□□□□□ -1.47
LRCH3-215ENST00000476664 NFATC4Q14934 902 aa5.84□□□□□ -1.47
LRCH3-215ENST00000476664 FASTKD3Q14CZ7 662 aaKnown RBP5.84□□□□□ -1.47
LRCH3-215ENST00000476664 PON2Q15165 354 aa5.84□□□□□ -1.47
LRCH3-215ENST00000476664 VAMP3Q15836 100 aa5.84□□□□□ -1.47
LRCH3-215ENST00000476664 SLC5A12Q1EHB4 618 aa5.84□□□□□ -1.47
LRCH3-215ENST00000476664 LRRC74BQ6ZQY2 392 aa5.84□□□□□ -1.47
LRCH3-215ENST00000476664 C19orf35Q6ZS72 473 aa5.84□□□□□ -1.47
LRCH3-215ENST00000476664 CYS1Q717R9 158 aa5.84□□□□□ -1.47
LRCH3-215ENST00000476664 NDUFAF7Q7L592 441 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms