RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 PTNP21246 168 aa13.15□□□□□ -0.3
ATG4B-213ENST00000460211 AHCYP23526 432 aa13.15□□□□□ -0.3
ATG4B-213ENST00000460211 RBM34P42696 430 aaKnown RBP13.15□□□□□ -0.3
ATG4B-213ENST00000460211 SELENOPP49908 381 aa13.15□□□□□ -0.3
ATG4B-213ENST00000460211 MXRA7P84157 204 aa13.15□□□□□ -0.3
ATG4B-213ENST00000460211 LTBQ06643 244 aa13.15□□□□□ -0.3
ATG4B-213ENST00000460211 PUDPQ08623 228 aa13.15□□□□□ -0.3
ATG4B-213ENST00000460211 ST3GAL3Q11203 375 aa13.15□□□□□ -0.3
ATG4B-213ENST00000460211 C9orf135Q5VTT2 229 aa13.15□□□□□ -0.3
ATG4B-213ENST00000460211 HMBOX1Q6NT76 420 aa13.15□□□□□ -0.3
ATG4B-213ENST00000460211 KLHL24Q6TFL4 600 aa13.15□□□□□ -0.3
ATG4B-213ENST00000460211 ZNF704Q6ZNC4 412 aaPredicted RBP13.15□□□□□ -0.3
ATG4B-213ENST00000460211 C17orf78Q8N4C9 275 aa13.15□□□□□ -0.3
ATG4B-213ENST00000460211 OR5J2Q8NH18 312 aa13.15□□□□□ -0.3
ATG4B-213ENST00000460211 GEMIN6Q8WXD5 167 aaKnown RBP13.15□□□□□ -0.3
ATG4B-213ENST00000460211 MOGAT1Q96PD6 335 aa13.15□□□□□ -0.3
ATG4B-213ENST00000460211 ALPK1Q96QP1 1244 aa13.15□□□□□ -0.3
ATG4B-213ENST00000460211 LINC00470Q9BZP3 86 aa13.15□□□□□ -0.3
ATG4B-213ENST00000460211 FKRPQ9H9S5 495 aa13.15□□□□□ -0.3
ATG4B-213ENST00000460211 UBTD1Q9HAC8 227 aa13.15□□□□□ -0.3
ATG4B-213ENST00000460211 NANSQ9NR45 359 aa13.15□□□□□ -0.3
ATG4B-213ENST00000460211 SEC14L4Q9UDX3 406 aa13.15□□□□□ -0.3
ATG4B-213ENST00000460211 A0A1W2PPR1 153 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 ZNF726A6NNF4 738 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 MS4A18H0YCH9 400 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 PDLIM1O00151 329 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 KPNA4O00629 521 aaPredicted RBP13.14□□□□□ -0.31
ATG4B-213ENST00000460211 PLPP3O14495 311 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 LYPD3O95274 346 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 SERPINA1P01009 418 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 THY1P04216 161 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 ITGA5P08648 1049 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 ADORA3P0DMS8 318 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 UMPSP11172 480 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 PIN1Q13526 163 aaPredicted RBP13.14□□□□□ -0.31
ATG4B-213ENST00000460211 GABRA6Q16445 453 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 ACKR1Q16570 336 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 ZNF74Q16587 644 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 MS4A18Q3C1V0 323 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 IFI44LQ53G44 452 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 KLHL17Q6TDP4 642 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 C16orf89Q6UX73 402 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 WDR88Q6ZMY6 472 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 C20orf204Q6ZNR8 217 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 CBLL1Q75N03 491 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 PXKQ7Z7A4 578 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 GPR137CQ8N3F9 429 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 CCDC197Q8NCU1 140 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 PIK3C3Q8NEB9 887 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 WFDC11Q8NEX6 87 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 PIGTQ969N2 578 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 MBD6Q96DN6 1003 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 HS3ST6Q96QI5 342 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 ZNF426Q9BUY5 554 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 GMPR2Q9P2T1 348 aaKnown RBP13.14□□□□□ -0.31
ATG4B-213ENST00000460211 B3GAT1Q9P2W7 334 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 ZNF229Q9UJW7 825 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 AMDHD2Q9Y303 409 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 RNF115Q9Y4L5 304 aa13.14□□□□□ -0.31
ATG4B-213ENST00000460211 MAGED1Q9Y5V3 778 aaPredicted RBP13.14□□□□□ -0.31
ATG4B-213ENST00000460211 HTR3EA5X5Y0 456 aa13.13□□□□□ -0.31
ATG4B-213ENST00000460211 CLOCKO15516 846 aa13.13□□□□□ -0.31
ATG4B-213ENST00000460211 ATE1O95260 518 aa13.13□□□□□ -0.31
ATG4B-213ENST00000460211 WNT11O96014 354 aa13.13□□□□□ -0.31
ATG4B-213ENST00000460211 MT-ND1P03886 318 aa13.13□□□□□ -0.31
ATG4B-213ENST00000460211 FOSL1P15407 271 aa13.13□□□□□ -0.31
ATG4B-213ENST00000460211 CDH2P19022 906 aaPredicted RBP13.13□□□□□ -0.31
ATG4B-213ENST00000460211 PAX7P23759 505 aa13.13□□□□□ -0.31
ATG4B-213ENST00000460211 LOXP28300 417 aaPredicted RBP13.13□□□□□ -0.31
ATG4B-213ENST00000460211 PRPS1P60891 318 aa13.13□□□□□ -0.31
ATG4B-213ENST00000460211 POU3F1Q03052 451 aaPredicted RBP13.13□□□□□ -0.31
ATG4B-213ENST00000460211 KRT72Q14CN4 511 aa13.13□□□□□ -0.31
ATG4B-213ENST00000460211 SAMD4BQ5PRF9 694 aaKnown RBP13.13□□□□□ -0.31
ATG4B-213ENST00000460211 NCMAPQ5T1S8 102 aa13.13□□□□□ -0.31
ATG4B-213ENST00000460211 GLYATQ6IB77 296 aa13.13□□□□□ -0.31
ATG4B-213ENST00000460211 VTCN1Q7Z7D3 282 aa13.13□□□□□ -0.31
ATG4B-213ENST00000460211 TSPYL5Q86VY4 417 aaPredicted RBP13.13□□□□□ -0.31
ATG4B-213ENST00000460211 CYP4Z1Q86W10 505 aa13.13□□□□□ -0.31
ATG4B-213ENST00000460211 PGAM4Q8N0Y7 254 aa13.13□□□□□ -0.31
ATG4B-213ENST00000460211 ANKK1Q8NFD2 765 aa13.13□□□□□ -0.31
ATG4B-213ENST00000460211 OR52N5Q8NH56 324 aa13.13□□□□□ -0.31
ATG4B-213ENST00000460211 TMEM239Q8WW34 195 aa13.13□□□□□ -0.31
ATG4B-213ENST00000460211 PRRC1Q96M27 445 aa13.13□□□□□ -0.31
ATG4B-213ENST00000460211 FNDC11Q9BVV2 318 aa13.13□□□□□ -0.31
ATG4B-213ENST00000460211 AMBRA1Q9C0C7 1298 aa13.13□□□□□ -0.31
ATG4B-213ENST00000460211 B3GAT2Q9NPZ5 323 aa13.13□□□□□ -0.31
ATG4B-213ENST00000460211 ARL8BQ9NVJ2 186 aa13.13□□□□□ -0.31
ATG4B-213ENST00000460211 MED31Q9Y3C7 131 aa13.13□□□□□ -0.31
ATG4B-213ENST00000460211 ROS1P08922 2347 aa13.12□□□□□ -0.31
ATG4B-213ENST00000460211 LRRN3E7EW58 273 aa13.12□□□□□ -0.31
ATG4B-213ENST00000460211 TRAF3IP2O43734 574 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-213ENST00000460211 UPK3AO75631 287 aa13.12□□□□□ -0.31
ATG4B-213ENST00000460211 ZNF432O94892 652 aa13.12□□□□□ -0.31
ATG4B-213ENST00000460211 IGF2P01344 180 aa13.12□□□□□ -0.31
ATG4B-213ENST00000460211 PTAFRP25105 342 aa13.12□□□□□ -0.31
ATG4B-213ENST00000460211 FOXG1P55316 489 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-213ENST00000460211 SH3BGRP55822 239 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-213ENST00000460211 UBE2NP61088 152 aaKnown RBP13.12□□□□□ -0.31
ATG4B-213ENST00000460211 ROR2Q01974 943 aaKnown RBP13.12□□□□□ -0.31
ATG4B-213ENST00000460211 ZP4Q12836 540 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms