RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 CDH12P55289 794 aa18.08■□□□□ 0.48
SDC1-205ENST00000447124 NRF1Q16656 503 aa18.08■□□□□ 0.48
SDC1-205ENST00000447124 PHYHD1Q5SRE7 291 aa18.08■□□□□ 0.48
SDC1-205ENST00000447124 HMBOX1Q6NT76 420 aa18.08■□□□□ 0.48
SDC1-205ENST00000447124 ANKRD16Q6P6B7 361 aa18.08■□□□□ 0.48
SDC1-205ENST00000447124 KLHL24Q6TFL4 600 aa18.08■□□□□ 0.48
SDC1-205ENST00000447124 WDFY1Q8IWB7 410 aa18.08■□□□□ 0.48
SDC1-205ENST00000447124 C11orf65Q8NCR3 313 aa18.08■□□□□ 0.48
SDC1-205ENST00000447124 OR4D11Q8NGI4 311 aa18.08■□□□□ 0.48
SDC1-205ENST00000447124 OR6S1Q8NH40 331 aa18.08■□□□□ 0.48
SDC1-205ENST00000447124 RNF217Q8TC41 542 aa18.08■□□□□ 0.48
SDC1-205ENST00000447124 MAGEE2Q8TD90 523 aaPredicted RBP18.08■□□□□ 0.48
SDC1-205ENST00000447124 TSPEARQ8WU66 669 aa18.08■□□□□ 0.48
SDC1-205ENST00000447124 ARHGDIGQ99819 225 aa18.08■□□□□ 0.48
SDC1-205ENST00000447124 SEC61A2Q9H9S3 476 aa18.08■□□□□ 0.48
SDC1-205ENST00000447124 GPR35Q9HC97 309 aa18.08■□□□□ 0.48
SDC1-205ENST00000447124 CRNNQ9UBG3 495 aaPredicted RBP18.08■□□□□ 0.48
SDC1-205ENST00000447124 ANGPT4Q9Y264 503 aa18.08■□□□□ 0.48
SDC1-205ENST00000447124 A0A096LNT2 108 aa18.07■□□□□ 0.48
SDC1-205ENST00000447124 ARPC4-TTLL3A0A0A6YYG9 625 aa18.07■□□□□ 0.48
SDC1-205ENST00000447124 LRRN3E7EW58 273 aa18.07■□□□□ 0.48
SDC1-205ENST00000447124 OPN1SWP03999 348 aa18.07■□□□□ 0.48
SDC1-205ENST00000447124 RBBP4Q09028 425 aa18.07■□□□□ 0.48
SDC1-205ENST00000447124 C1DQ13901 141 aaKnown RBP18.07■□□□□ 0.48
SDC1-205ENST00000447124 RAB35Q15286 201 aa18.07■□□□□ 0.48
SDC1-205ENST00000447124 NPTX1Q15818 432 aa18.07■□□□□ 0.48
SDC1-205ENST00000447124 SWI5Q1ZZU3 235 aa18.07■□□□□ 0.48
SDC1-205ENST00000447124 LINC00114Q6XXX2 140 aa18.07■□□□□ 0.48
SDC1-205ENST00000447124 RBM45Q8IUH3 476 aaKnown RBP18.07■□□□□ 0.48
SDC1-205ENST00000447124 BHLHE22Q8NFJ8 381 aaPredicted RBP18.07■□□□□ 0.48
SDC1-205ENST00000447124 TXNDC15Q96J42 360 aa18.07■□□□□ 0.48
SDC1-205ENST00000447124 MOGAT1Q96PD6 335 aa18.07■□□□□ 0.48
SDC1-205ENST00000447124 SLC38A2Q96QD8 506 aa18.07■□□□□ 0.48
SDC1-205ENST00000447124 OR2M2Q96R28 347 aa18.07■□□□□ 0.48
SDC1-205ENST00000447124 MCHR1Q99705 422 aa18.07■□□□□ 0.48
SDC1-205ENST00000447124 KAT8Q9H7Z6 458 aaKnown RBP18.07■□□□□ 0.48
SDC1-205ENST00000447124 ADAM21Q9UKJ8 722 aa18.07■□□□□ 0.48
SDC1-205ENST00000447124 A0A0G2JND7 137 aa18.06■□□□□ 0.48
SDC1-205ENST00000447124 KIAA1324LA8MWY0 1029 aaPredicted RBP18.06■□□□□ 0.48
SDC1-205ENST00000447124 FBP2O00757 339 aa18.06■□□□□ 0.48
SDC1-205ENST00000447124 ANGPT2O15123 496 aa18.06■□□□□ 0.48
SDC1-205ENST00000447124 GPRIN2O60269 458 aa18.06■□□□□ 0.48
SDC1-205ENST00000447124 SLC43A1O75387 559 aa18.06■□□□□ 0.48
SDC1-205ENST00000447124 LYPD3O95274 346 aa18.06■□□□□ 0.48
SDC1-205ENST00000447124 THY1P04216 161 aa18.06■□□□□ 0.48
SDC1-205ENST00000447124 HOXB1P14653 301 aaPredicted RBP18.06■□□□□ 0.48
SDC1-205ENST00000447124 UBE2NP61088 152 aaKnown RBP18.06■□□□□ 0.48
SDC1-205ENST00000447124 PPP2R2BQ00005 443 aa18.06■□□□□ 0.48
SDC1-205ENST00000447124 NFYCQ13952 458 aa18.06■□□□□ 0.48
SDC1-205ENST00000447124 TSPYL5Q86VY4 417 aaPredicted RBP18.06■□□□□ 0.48
SDC1-205ENST00000447124 TMEM123Q8N131 208 aa18.06■□□□□ 0.48
SDC1-205ENST00000447124 ADPRHL1Q8NDY3 354 aa18.06■□□□□ 0.48
SDC1-205ENST00000447124 OR6T1Q8NGN1 323 aa18.06■□□□□ 0.48
SDC1-205ENST00000447124 RHNO1Q9BSD3 238 aa18.06■□□□□ 0.48
SDC1-205ENST00000447124 EMC6Q9BV81 110 aa18.06■□□□□ 0.48
SDC1-205ENST00000447124 SLC13A4Q9UKG4 626 aa18.06■□□□□ 0.48
SDC1-205ENST00000447124 TRIM33Q9UPN9 1127 aa18.06■□□□□ 0.48
SDC1-205ENST00000447124 ZNF503-AS2A6NEH8 195 aa18.05■□□□□ 0.48
SDC1-205ENST00000447124 H7C417 338 aa18.05■□□□□ 0.48
SDC1-205ENST00000447124 IGLV1-44P01699 117 aa18.05■□□□□ 0.48
SDC1-205ENST00000447124 CECR9P0C854 216 aa18.05■□□□□ 0.48
SDC1-205ENST00000447124 CALCRP30988 508 aa18.05■□□□□ 0.48
SDC1-205ENST00000447124 NUDT6P53370 316 aa18.05■□□□□ 0.48
SDC1-205ENST00000447124 NCALDP61601 193 aa18.05■□□□□ 0.48
SDC1-205ENST00000447124 CYP51A1Q16850 503 aa18.05■□□□□ 0.48
SDC1-205ENST00000447124 CEACAM16Q2WEN9 425 aa18.05■□□□□ 0.48
SDC1-205ENST00000447124 METTL21CQ5VZV1 264 aa18.05■□□□□ 0.48
SDC1-205ENST00000447124 WDR88Q6ZMY6 472 aa18.05■□□□□ 0.48
SDC1-205ENST00000447124 C20orf196Q8IYI0 205 aa18.05■□□□□ 0.48
SDC1-205ENST00000447124 ANKK1Q8NFD2 765 aa18.05■□□□□ 0.48
SDC1-205ENST00000447124 OR10A6Q8NH74 314 aa18.05■□□□□ 0.48
SDC1-205ENST00000447124 TMEM43Q9BTV4 400 aa18.05■□□□□ 0.48
SDC1-205ENST00000447124 EVA1AQ9H8M9 152 aa18.05■□□□□ 0.48
SDC1-205ENST00000447124 CRLF2Q9HC73 371 aa18.05■□□□□ 0.48
SDC1-205ENST00000447124 ARGLU1Q9NWB6 273 aaPredicted RBP18.05■□□□□ 0.48
SDC1-205ENST00000447124 SELENONQ9NZV5 590 aa18.05■□□□□ 0.48
SDC1-205ENST00000447124 FMO6PO60774 539 aa18.04■□□□□ 0.48
SDC1-205ENST00000447124 LY6HO94772 140 aa18.04■□□□□ 0.48
SDC1-205ENST00000447124 C8BP07358 591 aa18.04■□□□□ 0.48
SDC1-205ENST00000447124 CELA3BP08861 270 aa18.04■□□□□ 0.48
SDC1-205ENST00000447124 CD247P20963 164 aa18.04■□□□□ 0.48
SDC1-205ENST00000447124 CRYBA2P53672 197 aa18.04■□□□□ 0.48
SDC1-205ENST00000447124 IL1RL1Q01638 556 aa18.04■□□□□ 0.48
SDC1-205ENST00000447124 NAAAQ02083 359 aa18.04■□□□□ 0.48
SDC1-205ENST00000447124 MFSD13AQ14CX5 517 aa18.04■□□□□ 0.48
SDC1-205ENST00000447124 CARD17Q5XLA6 110 aa18.04■□□□□ 0.48
SDC1-205ENST00000447124 MYPOPQ86VE0 399 aaPredicted RBP18.04■□□□□ 0.48
SDC1-205ENST00000447124 RANBP3LQ86VV4 465 aaPredicted RBP18.04■□□□□ 0.48
SDC1-205ENST00000447124 UEVLDQ8IX04 471 aa18.04■□□□□ 0.48
SDC1-205ENST00000447124 GPR137CQ8N3F9 429 aa18.04■□□□□ 0.48
SDC1-205ENST00000447124 ZNF525Q8N782 197 aa18.04■□□□□ 0.48
SDC1-205ENST00000447124 NANOS1Q8WY41 292 aaKnown RBP18.04■□□□□ 0.48
SDC1-205ENST00000447124 TAMM41Q96BW9 452 aa18.04■□□□□ 0.48
SDC1-205ENST00000447124 FBXO17Q96EF6 278 aa18.04■□□□□ 0.48
SDC1-205ENST00000447124 ZNF317Q96PQ6 595 aaPredicted RBP18.04■□□□□ 0.48
SDC1-205ENST00000447124 EPYCQ99645 322 aa18.04■□□□□ 0.48
SDC1-205ENST00000447124 MED29Q9NX70 200 aa18.04■□□□□ 0.48
SDC1-205ENST00000447124 MRPL39Q9NYK5 338 aaKnown RBP18.04■□□□□ 0.48
SDC1-205ENST00000447124 CORINQ9Y5Q5 1042 aa18.04■□□□□ 0.48
SDC1-205ENST00000447124 SLC35F4A4IF30 521 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms