RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 NFKBIDQ8NI38 313 aa12.5□□□□□ -0.41
TNFRSF1A-203ENST00000437813 ZNF417Q8TAU3 575 aa12.5□□□□□ -0.41
TNFRSF1A-203ENST00000437813 SLC25A36Q96CQ1 311 aa12.5□□□□□ -0.41
TNFRSF1A-203ENST00000437813 FBXO17Q96EF6 278 aa12.5□□□□□ -0.41
TNFRSF1A-203ENST00000437813 ZNF587Q96SQ5 575 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF1A-203ENST00000437813 RAD21L1Q9H4I0 556 aa12.5□□□□□ -0.41
TNFRSF1A-203ENST00000437813 TMEM38AQ9H6F2 299 aa12.5□□□□□ -0.41
TNFRSF1A-203ENST00000437813 GPR35Q9HC97 309 aa12.5□□□□□ -0.41
TNFRSF1A-203ENST00000437813 TCF7L2Q9NQB0 619 aa12.5□□□□□ -0.41
TNFRSF1A-203ENST00000437813 PMF1-BGLAPU3KQ54 211 aa12.5□□□□□ -0.41
TNFRSF1A-203ENST00000437813 A0A096LPE4 126 aa12.49□□□□□ -0.41
TNFRSF1A-203ENST00000437813 A0A1W2PPZ6 126 aa12.49□□□□□ -0.41
TNFRSF1A-203ENST00000437813 TMEM129A0AVI4 362 aa12.49□□□□□ -0.41
TNFRSF1A-203ENST00000437813 MS4A18H0YCH9 400 aa12.49□□□□□ -0.41
TNFRSF1A-203ENST00000437813 NDUFS8O00217 210 aa12.49□□□□□ -0.41
TNFRSF1A-203ENST00000437813 OR2T1O43869 369 aa12.49□□□□□ -0.41
TNFRSF1A-203ENST00000437813 ERLIN1O75477 346 aa12.49□□□□□ -0.41
TNFRSF1A-203ENST00000437813 CRYAAP02489 173 aa12.49□□□□□ -0.41
TNFRSF1A-203ENST00000437813 BGLAPP02818 100 aa12.49□□□□□ -0.41
TNFRSF1A-203ENST00000437813 BMP4P12644 408 aa12.49□□□□□ -0.41
TNFRSF1A-203ENST00000437813 CBR1P16152 277 aa12.49□□□□□ -0.41
TNFRSF1A-203ENST00000437813 GRPRP30550 384 aa12.49□□□□□ -0.41
TNFRSF1A-203ENST00000437813 NR4A2P43354 598 aa12.49□□□□□ -0.41
TNFRSF1A-203ENST00000437813 MS4A18Q3C1V0 323 aa12.49□□□□□ -0.41
TNFRSF1A-203ENST00000437813 FAM91A1Q658Y4 838 aa12.49□□□□□ -0.41
TNFRSF1A-203ENST00000437813 REEP3Q6NUK4 255 aa12.49□□□□□ -0.41
TNFRSF1A-203ENST00000437813 DNAJA4Q8WW22 397 aaPredicted RBP12.49□□□□□ -0.41
TNFRSF1A-203ENST00000437813 SPDL1Q96EA4 605 aa12.49□□□□□ -0.41
TNFRSF1A-203ENST00000437813 CCDC28BQ9BUN5 200 aa12.49□□□□□ -0.41
TNFRSF1A-203ENST00000437813 ZNF442Q9H7R0 627 aa12.49□□□□□ -0.41
TNFRSF1A-203ENST00000437813 B3GNT2Q9NY97 397 aa12.49□□□□□ -0.41
TNFRSF1A-203ENST00000437813 CDC42EP3Q9UKI2 254 aa12.49□□□□□ -0.41
TNFRSF1A-203ENST00000437813 TRAV36DV7A0A075B6V5 113 aa12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 A0A087WUJ7 227 aa12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 IGHV2OR16-5A0A0B4J2B6 119 aa12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 A0A0B4J2E0 115 aa12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 A0A1B0GX12 115 aa12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 SLC35F4A4IF30 521 aa12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 TMEM247A6NEH6 219 aa12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 B9A039 149 aa12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 AIM2O14862 343 aa12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 KRT33AO76009 404 aa12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 OR4A8P0C604 315 aa12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 HLA-DOBP13765 273 aa12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 ZNF16P17020 682 aaPredicted RBP12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 ZNF43P17038 809 aa12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 PPOXP50336 477 aa12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 PCBP3P57721 371 aaKnown RBP12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 LSM11P83369 360 aaKnown RBP eCLIP12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 CDK6Q00534 326 aa12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 MSMPQ1L6U9 139 aa12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 CEACAM16Q2WEN9 425 aa12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 ALG10BQ5I7T1 473 aa12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 GCNT6Q5T4J0 391 aa12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 AGBL2Q5U5Z8 902 aa12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 ULK3Q6PHR2 472 aa12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 LINC00114Q6XXX2 140 aa12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 H1FNTQ75WM6 255 aaPredicted RBP12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 NET1Q7Z628 596 aaPredicted RBP12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 ANKS4BQ8N8V4 417 aa12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 OR4F15Q8NGB8 312 aa12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 FOXN4Q96NZ1 517 aa12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 DOK1Q99704 481 aa12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 CPPED1Q9BRF8 314 aaPredicted RBP12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 ZNF385DQ9H6B1 395 aa12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 NOX3Q9HBY0 568 aa12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 CRLF2Q9HC73 371 aa12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 MOV10Q9HCE1 1003 aaKnown RBP12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 ZNF224Q9NZL3 707 aa12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 TESQ9UGI8 421 aaKnown RBP12.48□□□□□ -0.41
TNFRSF1A-203ENST00000437813 IGHV4-61A0A0C4DH41 118 aa12.47□□□□□ -0.41
TNFRSF1A-203ENST00000437813 SLC43A1O75387 559 aa12.47□□□□□ -0.41
TNFRSF1A-203ENST00000437813 MFN2O95140 757 aa12.47□□□□□ -0.41
TNFRSF1A-203ENST00000437813 LYPD3O95274 346 aa12.47□□□□□ -0.41
TNFRSF1A-203ENST00000437813 IGFBP5P24593 272 aa12.47□□□□□ -0.41
TNFRSF1A-203ENST00000437813 GIFP27352 417 aa12.47□□□□□ -0.41
TNFRSF1A-203ENST00000437813 THBS2P35442 1172 aa12.47□□□□□ -0.41
TNFRSF1A-203ENST00000437813 PDLIM4P50479 330 aa12.47□□□□□ -0.41
TNFRSF1A-203ENST00000437813 ATP4BP51164 291 aa12.47□□□□□ -0.41
TNFRSF1A-203ENST00000437813 UBE2NP61088 152 aaKnown RBP12.47□□□□□ -0.41
TNFRSF1A-203ENST00000437813 SNRPD2P62316 118 aaKnown RBP12.47□□□□□ -0.41
TNFRSF1A-203ENST00000437813 CYB5R2Q6BCY4 276 aa12.47□□□□□ -0.41
TNFRSF1A-203ENST00000437813 PTOV1Q86YD1 416 aa12.47□□□□□ -0.41
TNFRSF1A-203ENST00000437813 C20orf196Q8IYI0 205 aa12.47□□□□□ -0.41
TNFRSF1A-203ENST00000437813 ARIH2OSQ8N7S6 290 aa12.47□□□□□ -0.41
TNFRSF1A-203ENST00000437813 STON2Q8WXE9 905 aa12.47□□□□□ -0.41
TNFRSF1A-203ENST00000437813 MSI2Q96DH6 328 aaKnown RBP12.47□□□□□ -0.41
TNFRSF1A-203ENST00000437813 LRR1Q96L50 414 aa12.47□□□□□ -0.41
TNFRSF1A-203ENST00000437813 MOGAT1Q96PD6 335 aa12.47□□□□□ -0.41
TNFRSF1A-203ENST00000437813 SOX7Q9BT81 388 aa12.47□□□□□ -0.41
TNFRSF1A-203ENST00000437813 CCDC167Q9P0B6 97 aa12.47□□□□□ -0.41
TNFRSF1A-203ENST00000437813 NBEAL1Q6ZS30 2694 aa12.46□□□□□ -0.41
TNFRSF1A-203ENST00000437813 LOC390937A0A1W2PQ73 354 aa12.46□□□□□ -0.41
TNFRSF1A-203ENST00000437813 RNF212BA8MTL3 300 aa12.46□□□□□ -0.41
TNFRSF1A-203ENST00000437813 ZNF99A8MXY4 864 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF1A-203ENST00000437813 POLR3GO15318 223 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF1A-203ENST00000437813 PHF1O43189 567 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF1A-203ENST00000437813 IFNA2P01563 188 aa12.46□□□□□ -0.41
TNFRSF1A-203ENST00000437813 PPIBP23284 216 aaKnown RBP12.46□□□□□ -0.41
TNFRSF1A-203ENST00000437813 THBS4P35443 961 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms