RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 CMTM5Q96DZ9 223 aa17.82■□□□□ 0.44
GTF3A-202ENST00000419181 PRSS27Q9BQR3 290 aa17.82■□□□□ 0.44
GTF3A-202ENST00000419181 SLC19A3Q9BZV2 496 aa17.82■□□□□ 0.44
GTF3A-202ENST00000419181 POLR2J2Q9GZM3 115 aaKnown RBP17.82■□□□□ 0.44
GTF3A-202ENST00000419181 POLR2J3Q9H1A7 115 aaKnown RBP17.82■□□□□ 0.44
GTF3A-202ENST00000419181 VPS13CQ709C8 3753 aa17.82■□□□□ 0.44
GTF3A-202ENST00000419181 SMPD2O60906 423 aa17.81■□□□□ 0.44
GTF3A-202ENST00000419181 HLA-DOBP13765 273 aa17.81■□□□□ 0.44
GTF3A-202ENST00000419181 CD99P14209 185 aa17.81■□□□□ 0.44
GTF3A-202ENST00000419181 PRDX6P30041 224 aa17.81■□□□□ 0.44
GTF3A-202ENST00000419181 OR1E2P47887 323 aa17.81■□□□□ 0.44
GTF3A-202ENST00000419181 GNGT1P63211 74 aa17.81■□□□□ 0.44
GTF3A-202ENST00000419181 SLC25A3Q00325 362 aa17.81■□□□□ 0.44
GTF3A-202ENST00000419181 IL1RL1Q01638 556 aa17.81■□□□□ 0.44
GTF3A-202ENST00000419181 PUDPQ08623 228 aa17.81■□□□□ 0.44
GTF3A-202ENST00000419181 PMS2P3Q13401 168 aa17.81■□□□□ 0.44
GTF3A-202ENST00000419181 ZNF74Q16587 644 aa17.81■□□□□ 0.44
GTF3A-202ENST00000419181 ZNF672Q499Z4 452 aaPredicted RBP17.81■□□□□ 0.44
GTF3A-202ENST00000419181 TMEM108Q6UXF1 575 aa17.81■□□□□ 0.44
GTF3A-202ENST00000419181 NHLRC1Q6VVB1 395 aa17.81■□□□□ 0.44
GTF3A-202ENST00000419181 DEF8Q6ZN54 512 aa17.81■□□□□ 0.44
GTF3A-202ENST00000419181 KRTAP1-3Q8IUG1 177 aa17.81■□□□□ 0.44
GTF3A-202ENST00000419181 UEVLDQ8IX04 471 aa17.81■□□□□ 0.44
GTF3A-202ENST00000419181 TMEM123Q8N131 208 aa17.81■□□□□ 0.44
GTF3A-202ENST00000419181 LRRC75A-AS1Q8N1F1 130 aa17.81■□□□□ 0.44
GTF3A-202ENST00000419181 TMUB1Q9BVT8 246 aa17.81■□□□□ 0.44
GTF3A-202ENST00000419181 ALG2Q9H553 416 aa17.81■□□□□ 0.44
GTF3A-202ENST00000419181 AMDHD2Q9Y303 409 aa17.81■□□□□ 0.44
GTF3A-202ENST00000419181 SHISA9B4DS77 424 aa17.8■□□□□ 0.44
GTF3A-202ENST00000419181 RPL36A-HNRNPH2H7BZ11 118 aa17.8■□□□□ 0.44
GTF3A-202ENST00000419181 PLPP3O14495 311 aa17.8■□□□□ 0.44
GTF3A-202ENST00000419181 ABCD4O14678 606 aa17.8■□□□□ 0.44
GTF3A-202ENST00000419181 AKAP8O43823 692 aaKnown RBP17.8■□□□□ 0.44
GTF3A-202ENST00000419181 SHOX2O60902 331 aaPredicted RBP17.8■□□□□ 0.44
GTF3A-202ENST00000419181 SLC43A1O75387 559 aa17.8■□□□□ 0.44
GTF3A-202ENST00000419181 CDH2P19022 906 aaPredicted RBP17.8■□□□□ 0.44
GTF3A-202ENST00000419181 ZNF83P51522 516 aa17.8■□□□□ 0.44
GTF3A-202ENST00000419181 SELENOWP63302 87 aa17.8■□□□□ 0.44
GTF3A-202ENST00000419181 POU3F1Q03052 451 aaPredicted RBP17.8■□□□□ 0.44
GTF3A-202ENST00000419181 KLHL17Q6TDP4 642 aa17.8■□□□□ 0.44
GTF3A-202ENST00000419181 ANKK1Q8NFD2 765 aa17.8■□□□□ 0.44
GTF3A-202ENST00000419181 OR1K1Q8NGR3 316 aa17.8■□□□□ 0.44
GTF3A-202ENST00000419181 OR5J2Q8NH18 312 aa17.8■□□□□ 0.44
GTF3A-202ENST00000419181 NEUROG1Q92886 237 aa17.8■□□□□ 0.44
GTF3A-202ENST00000419181 FBXW5Q969U6 566 aa17.8■□□□□ 0.44
GTF3A-202ENST00000419181 OR2M2Q96R28 347 aa17.8■□□□□ 0.44
GTF3A-202ENST00000419181 FKRPQ9H9S5 495 aa17.8■□□□□ 0.44
GTF3A-202ENST00000419181 ABCD2Q9UBJ2 740 aa17.8■□□□□ 0.44
GTF3A-202ENST00000419181 NOX1Q9Y5S8 564 aa17.8■□□□□ 0.44
GTF3A-202ENST00000419181 USF3Q68DE3 2245 aa17.79■□□□□ 0.44
GTF3A-202ENST00000419181 KPNA4O00629 521 aaPredicted RBP17.79■□□□□ 0.44
GTF3A-202ENST00000419181 NDUFAB1O14561 156 aa17.79■□□□□ 0.44
GTF3A-202ENST00000419181 OR5F1O95221 314 aa17.79■□□□□ 0.44
GTF3A-202ENST00000419181 CH25HO95992 272 aa17.79■□□□□ 0.44
GTF3A-202ENST00000419181 PTAFRP25105 342 aa17.79■□□□□ 0.44
GTF3A-202ENST00000419181 CD40P25942 277 aa17.79■□□□□ 0.44
GTF3A-202ENST00000419181 GSK3BP49841 420 aa17.79■□□□□ 0.44
GTF3A-202ENST00000419181 TAS2R41P59536 307 aa17.79■□□□□ 0.44
GTF3A-202ENST00000419181 NKX6-1P78426 367 aaPredicted RBP17.79■□□□□ 0.44
GTF3A-202ENST00000419181 ROR2Q01974 943 aaKnown RBP17.79■□□□□ 0.44
GTF3A-202ENST00000419181 PIN1Q13526 163 aaPredicted RBP17.79■□□□□ 0.44
GTF3A-202ENST00000419181 HIKESHIQ53FT3 197 aa17.79■□□□□ 0.44
GTF3A-202ENST00000419181 PXKQ7Z7A4 578 aa17.79■□□□□ 0.44
GTF3A-202ENST00000419181 PIK3C3Q8NEB9 887 aa17.79■□□□□ 0.44
GTF3A-202ENST00000419181 WFDC11Q8NEX6 87 aa17.79■□□□□ 0.44
GTF3A-202ENST00000419181 TPD52L3Q96J77 140 aa17.79■□□□□ 0.44
GTF3A-202ENST00000419181 MEPEQ9NQ76 525 aaPredicted RBP17.79■□□□□ 0.44
GTF3A-202ENST00000419181 RIMS3Q9UJD0 308 aa17.79■□□□□ 0.44
GTF3A-202ENST00000419181 MAGED1Q9Y5V3 778 aaPredicted RBP17.79■□□□□ 0.44
GTF3A-202ENST00000419181 CXCR6O00574 342 aa17.78■□□□□ 0.44
GTF3A-202ENST00000419181 DYNC1I1O14576 645 aa17.78■□□□□ 0.44
GTF3A-202ENST00000419181 TMCC2O75069 709 aa17.78■□□□□ 0.44
GTF3A-202ENST00000419181 DANCRP0C864 163 aa17.78■□□□□ 0.44
GTF3A-202ENST00000419181 THRBP10828 461 aa17.78■□□□□ 0.44
GTF3A-202ENST00000419181 RBM34P42696 430 aaKnown RBP17.78■□□□□ 0.44
GTF3A-202ENST00000419181 SH3BGRP55822 239 aaPredicted RBP17.78■□□□□ 0.44
GTF3A-202ENST00000419181 RIPPLY3P57055 190 aa17.78■□□□□ 0.44
GTF3A-202ENST00000419181 PRPS1P60891 318 aa17.78■□□□□ 0.44
GTF3A-202ENST00000419181 PSME3P61289 254 aa17.78■□□□□ 0.44
GTF3A-202ENST00000419181 FOXD4Q12950 439 aaPredicted RBP17.78■□□□□ 0.44
GTF3A-202ENST00000419181 TBRG1Q3YBR2 411 aa17.78■□□□□ 0.44
GTF3A-202ENST00000419181 SHEQ5VZ18 495 aa17.78■□□□□ 0.44
GTF3A-202ENST00000419181 HMBOX1Q6NT76 420 aa17.78■□□□□ 0.44
GTF3A-202ENST00000419181 PIGWQ7Z7B1 504 aa17.78■□□□□ 0.44
GTF3A-202ENST00000419181 NKAIN4Q8IVV8 208 aa17.78■□□□□ 0.44
GTF3A-202ENST00000419181 TMEM171Q8WVE6 324 aa17.78■□□□□ 0.44
GTF3A-202ENST00000419181 LZICQ8WZA0 190 aa17.78■□□□□ 0.44
GTF3A-202ENST00000419181 BCL2L2Q92843 193 aaPredicted RBP17.78■□□□□ 0.44
GTF3A-202ENST00000419181 RADILQ96JH8 1075 aa17.78■□□□□ 0.44
GTF3A-202ENST00000419181 C1QTNF6Q9BXI9 259 aa17.78■□□□□ 0.44
GTF3A-202ENST00000419181 GSX2Q9BZM3 304 aa17.78■□□□□ 0.44
GTF3A-202ENST00000419181 NELFAQ9H3P2 528 aa17.78■□□□□ 0.44
GTF3A-202ENST00000419181 OBP2BQ9NPH6 170 aa17.78■□□□□ 0.44
GTF3A-202ENST00000419181 NANSQ9NR45 359 aa17.78■□□□□ 0.44
GTF3A-202ENST00000419181 MED29Q9NX70 200 aa17.78■□□□□ 0.44
GTF3A-202ENST00000419181 ZNF229Q9UJW7 825 aa17.78■□□□□ 0.44
GTF3A-202ENST00000419181 MGAT4BQ9UQ53 548 aa17.78■□□□□ 0.44
GTF3A-202ENST00000419181 HEATR1Q9H583 2144 aaKnown RBP17.77■□□□□ 0.44
GTF3A-202ENST00000419181 M0R1B8 84 aa17.77■□□□□ 0.44
GTF3A-202ENST00000419181 WNT11O96014 354 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms