RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 MFSD13AQ14CX5 517 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 SLC25A53Q5H9E4 307 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 LINC01590Q5TEZ4 76 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 SLC6A19Q695T7 634 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 VASNQ6EMK4 673 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 TUBA3EQ6PEY2 450 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 IL20RBQ6UXL0 311 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 SSX6Q7RTT6 188 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 TIPARPQ7Z3E1 657 aaKnown RBP17.13■□□□□ 0.33
USP39-202ENST00000409025 BTLAQ7Z6A9 289 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 OR2T4Q8NH00 348 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 ASB15Q8WXK1 588 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 HDHD5Q9BXW7 423 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 CDCP1Q9H5V8 836 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 HRH3Q9Y5N1 445 aa17.13■□□□□ 0.33
USP39-202ENST00000409025 SIRT4Q9Y6E7 314 aaPredicted RBP17.13■□□□□ 0.33
USP39-202ENST00000409025 CHCHD2Q9Y6H1 151 aaPredicted RBP17.13■□□□□ 0.33
USP39-202ENST00000409025 FAM47E-STBD1D6RA91 191 aa17.12■□□□□ 0.33
USP39-202ENST00000409025 TAF4O00268 1085 aa17.12■□□□□ 0.33
USP39-202ENST00000409025 PLPP3O14495 311 aa17.12■□□□□ 0.33
USP39-202ENST00000409025 XKRYO14609 159 aa17.12■□□□□ 0.33
USP39-202ENST00000409025 MT-CO3P00414 261 aa17.12■□□□□ 0.33
USP39-202ENST00000409025 CD53P19397 219 aa17.12■□□□□ 0.33
USP39-202ENST00000409025 SSR4P51571 173 aa17.12■□□□□ 0.33
USP39-202ENST00000409025 PLPPR5Q32ZL2 321 aa17.12■□□□□ 0.33
USP39-202ENST00000409025 MARCH9Q86YJ5 346 aa17.12■□□□□ 0.33
USP39-202ENST00000409025 SYS1Q8N2H4 156 aa17.12■□□□□ 0.33
USP39-202ENST00000409025 OR2M3Q8NG83 312 aa17.12■□□□□ 0.33
USP39-202ENST00000409025 MFSD8Q8NHS3 518 aa17.12■□□□□ 0.33
USP39-202ENST00000409025 ZNF417Q8TAU3 575 aa17.12■□□□□ 0.33
USP39-202ENST00000409025 FNDC8Q8TC99 324 aa17.12■□□□□ 0.33
USP39-202ENST00000409025 SLC25A46Q96AG3 418 aa17.12■□□□□ 0.33
USP39-202ENST00000409025 TSSK2Q96PF2 358 aa17.12■□□□□ 0.33
USP39-202ENST00000409025 ZNF587Q96SQ5 575 aaPredicted RBP17.12■□□□□ 0.33
USP39-202ENST00000409025 BARHL1Q9BZE3 327 aa17.12■□□□□ 0.33
USP39-202ENST00000409025 TPK1Q9H3S4 243 aa17.12■□□□□ 0.33
USP39-202ENST00000409025 SRA1Q9HD15 236 aaKnown RBP17.12■□□□□ 0.33
USP39-202ENST00000409025 VPS13AQ96RL7 3174 aa17.12■□□□□ 0.33
USP39-202ENST00000409025 CCDC187A0A096LP49 1063 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 FAM171A2A8MVW0 826 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 FTCDNL1E5RQL4 147 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 H7C1C5 153 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 ARHGEF9O43307 516 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 TRIM3O75382 744 aaPredicted RBP17.11■□□□□ 0.33
USP39-202ENST00000409025 RGS9O75916 674 aaPredicted RBP17.11■□□□□ 0.33
USP39-202ENST00000409025 GAAP10253 952 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 GTF2E2P29084 291 aaKnown RBP17.11■□□□□ 0.33
USP39-202ENST00000409025 OTX2P32243 289 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 SDC2P34741 201 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 RPL27P61353 136 aaKnown RBP17.11■□□□□ 0.33
USP39-202ENST00000409025 RPS18P62269 152 aaKnown RBP17.11■□□□□ 0.33
USP39-202ENST00000409025 LCN6P62502 163 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 HSF2Q03933 536 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 TRAM1Q15629 374 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 PPP1R32Q7Z5V6 425 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 RPS19BP1Q86WX3 136 aaKnown RBP17.11■□□□□ 0.33
USP39-202ENST00000409025 DND1Q8IYX4 353 aaKnown RBP17.11■□□□□ 0.33
USP39-202ENST00000409025 CPAMD8Q8IZJ3 1885 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 RFLNBQ8N5W9 214 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 SNX33Q8WV41 574 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 SMURF1Q9HCE7 757 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 FARSAQ9Y285 508 aaKnown RBP17.11■□□□□ 0.33
USP39-202ENST00000409025 E9PI62 339 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 PLPP2O43688 288 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 PLGP00747 810 aaPredicted RBP17.11■□□□□ 0.33
USP39-202ENST00000409025 TFPIP10646 304 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 ICAM2P13598 275 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 ACVR1BP36896 505 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 PPP5CP53041 499 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 SPEM2Q0P670 501 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 SSPNQ14714 243 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 ACKR1Q16570 336 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 CDONQ4KMG0 1287 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 TP53I3Q53FA7 332 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 TMEM164Q5U3C3 297 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 TMEM81Q6P7N7 255 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 ARL9Q6T311 187 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 OR4K17Q8NGC6 315 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 THAP4Q8WY91 577 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 RELTQ969Z4 430 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 TTTY10Q9BZA0 68 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 SPRY4Q9C004 299 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 TXNIPQ9H3M7 391 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 PTGES2Q9H7Z7 377 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 SERINC1Q9NRX5 453 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 POLHQ9Y253 713 aa17.11■□□□□ 0.33
USP39-202ENST00000409025 CD8B2A6NJW9 211 aa17.1■□□□□ 0.33
USP39-202ENST00000409025 C9orf172C9J069 976 aa17.1■□□□□ 0.33
USP39-202ENST00000409025 IGHMP01871 453 aa17.1■□□□□ 0.33
USP39-202ENST00000409025 CLEC2LP0C7M8 214 aa17.1■□□□□ 0.33
USP39-202ENST00000409025 CD8BP10966 210 aa17.1■□□□□ 0.33
USP39-202ENST00000409025 ZNF12P17014 697 aa17.1■□□□□ 0.33
USP39-202ENST00000409025 CD40LGP29965 261 aa17.1■□□□□ 0.33
USP39-202ENST00000409025 GBX2P52951 348 aaPredicted RBP17.1■□□□□ 0.33
USP39-202ENST00000409025 MLF1P58340 268 aa17.1■□□□□ 0.33
USP39-202ENST00000409025 RPS15P62841 145 aaKnown RBP17.1■□□□□ 0.33
USP39-202ENST00000409025 ZNF45Q02386 682 aa17.1■□□□□ 0.33
USP39-202ENST00000409025 EIF3IQ13347 325 aaKnown RBP17.1■□□□□ 0.33
USP39-202ENST00000409025 OR7A5Q15622 319 aa17.1■□□□□ 0.33
USP39-202ENST00000409025 PRAMEF20Q5VT98 475 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms