RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 PLA2G3Q9NZ20 509 aa13.65□□□□□ -0.22
SCAF11-204ENST00000395454 USP24Q9UPU5 2620 aa13.65□□□□□ -0.22
SCAF11-204ENST00000395454 IGLV3-32A0A0A0MS00 114 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 MKRN2OSH3BPM6 223 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 AKAP8O43823 692 aaKnown RBP13.64□□□□□ -0.23
SCAF11-204ENST00000395454 SBK2P0C263 348 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 FBXO45P0C2W1 286 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 HIST1H1CP16403 213 aaKnown RBP13.64□□□□□ -0.23
SCAF11-204ENST00000395454 GABRA5P31644 462 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 CD79BP40259 229 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 CASRP41180 1078 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 MFAP5Q13361 173 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 GPR50Q13585 617 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 TOMM34Q15785 309 aaPredicted RBP13.64□□□□□ -0.23
SCAF11-204ENST00000395454 GRINAQ7Z429 371 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 NPEPL1Q8NDH3 523 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 OR51G2Q8NGK0 314 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 B4GALNT2Q8NHY0 566 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 TRMT61AQ96FX7 289 aaKnown RBP13.64□□□□□ -0.23
SCAF11-204ENST00000395454 UTP23Q9BRU9 249 aaKnown RBP13.64□□□□□ -0.23
SCAF11-204ENST00000395454 WDR12Q9GZL7 423 aaKnown RBP13.64□□□□□ -0.23
SCAF11-204ENST00000395454 RNF167Q9H6Y7 350 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 HMG20AQ9NP66 347 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 NANSQ9NR45 359 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 SPIN1Q9Y657 262 aaPredicted RBP13.64□□□□□ -0.23
SCAF11-204ENST00000395454 PRRC2CQ9Y520 2896 aaKnown RBP13.64□□□□□ -0.23
SCAF11-204ENST00000395454 TNRC6AQ8NDV7 1962 aaKnown RBP13.64□□□□□ -0.23
SCAF11-204ENST00000395454 C17orf51A8MQB3 221 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 LALBAP00709 142 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 MT-ATP6P00846 226 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 CD14P08571 375 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 GP1BBP13224 206 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 GALP22466 123 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 FGF9P31371 208 aaPredicted RBP13.64□□□□□ -0.23
SCAF11-204ENST00000395454 IDUAP35475 653 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 CAPZA2P47755 286 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 POLR2HP52434 150 aaKnown RBP13.64□□□□□ -0.23
SCAF11-204ENST00000395454 RPS3AP61247 264 aaKnown RBP13.64□□□□□ -0.23
SCAF11-204ENST00000395454 ACTC1P68032 377 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 ACTA1P68133 377 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 ARG2P78540 354 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 GALEQ14376 348 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 ZNF846Q147U1 533 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 QPRTQ15274 297 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 NTRK2Q16620 822 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 ST3GAL2Q16842 350 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 C5orf46Q6UWT4 87 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 LHFPL3Q86UP9 236 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 OR10G3Q8NGC4 313 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 MCFD2Q8NI22 146 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 GATAD2BQ8WXI9 593 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 ST8SIA1Q92185 356 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 UFD1Q92890 307 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 TMCO6Q96DC7 493 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 KTI12Q96EK9 354 aaPredicted RBP13.64□□□□□ -0.23
SCAF11-204ENST00000395454 SMAD5Q99717 465 aaKnown RBP13.64□□□□□ -0.23
SCAF11-204ENST00000395454 COQ7Q99807 217 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 PRORYQ9H606 182 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 RYDENQ9NUL5 291 aaKnown RBP13.64□□□□□ -0.23
SCAF11-204ENST00000395454 LRFN1Q9P244 771 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 ADAM18Q9Y3Q7 739 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 CORINQ9Y5Q5 1042 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 IER3IP1Q9Y5U9 82 aa13.64□□□□□ -0.23
SCAF11-204ENST00000395454 TRAV36DV7A0A075B6V5 113 aa13.63□□□□□ -0.23
SCAF11-204ENST00000395454 ANKUB1A6NFN9 424 aa13.63□□□□□ -0.23
SCAF11-204ENST00000395454 C12orf71A8MTZ7 269 aa13.63□□□□□ -0.23
SCAF11-204ENST00000395454 SCO2O43819 266 aa13.63□□□□□ -0.23
SCAF11-204ENST00000395454 BGLAPP02818 100 aa13.63□□□□□ -0.23
SCAF11-204ENST00000395454 CD96P40200 585 aa13.63□□□□□ -0.23
SCAF11-204ENST00000395454 HTR3AP46098 478 aa13.63□□□□□ -0.23
SCAF11-204ENST00000395454 C17orf67Q0P5P2 114 aa13.63□□□□□ -0.23
SCAF11-204ENST00000395454 ZNF791Q3KP31 576 aaPredicted RBP13.63□□□□□ -0.23
SCAF11-204ENST00000395454 EMC4Q5J8M3 183 aa13.63□□□□□ -0.23
SCAF11-204ENST00000395454 SLC35D3Q5M8T2 416 aa13.63□□□□□ -0.23
SCAF11-204ENST00000395454 TUBA3EQ6PEY2 450 aa13.63□□□□□ -0.23
SCAF11-204ENST00000395454 ZBTB46Q86UZ6 589 aa13.63□□□□□ -0.23
SCAF11-204ENST00000395454 POMGNT2Q8NAT1 580 aa13.63□□□□□ -0.23
SCAF11-204ENST00000395454 CYB561A3Q8NBI2 242 aa13.63□□□□□ -0.23
SCAF11-204ENST00000395454 OR52E2Q8NGJ4 325 aa13.63□□□□□ -0.23
SCAF11-204ENST00000395454 OR6S1Q8NH40 331 aa13.63□□□□□ -0.23
SCAF11-204ENST00000395454 MOSPD2Q8NHP6 518 aa13.63□□□□□ -0.23
SCAF11-204ENST00000395454 TAAR8Q969N4 342 aa13.63□□□□□ -0.23
SCAF11-204ENST00000395454 KATNB1Q9BVA0 655 aa13.63□□□□□ -0.23
SCAF11-204ENST00000395454 PTDSS2Q9BVG9 487 aa13.63□□□□□ -0.23
SCAF11-204ENST00000395454 OCEL1Q9H607 264 aa13.63□□□□□ -0.23
SCAF11-204ENST00000395454 PCDHGA9Q9Y5G4 932 aaKnown RBP13.63□□□□□ -0.23
SCAF11-204ENST00000395454 SMG1Q96Q15 3661 aaKnown RBP13.63□□□□□ -0.23
SCAF11-204ENST00000395454 A0A075B6Q4 140 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 B4DXG7 233 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 FZD7O75084 574 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 FAM87AP0C7U9 286 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 CLUP10909 449 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 CXCR1P25024 350 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 ATP6V1E1P36543 226 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 SLC25A1P53007 311 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.62□□□□□ -0.234e-7■■■■■ 30.7
SCAF11-204ENST00000395454 VASNQ6EMK4 673 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 SPINK14Q6IE38 97 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 TMPRSS11AQ6ZMR5 421 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 DND1Q8IYX4 353 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms