RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 OR1K1Q8NGR3 316 aa13.64□□□□□ -0.23
DDX55-202ENST00000354291 RNF217Q8TC41 542 aa13.64□□□□□ -0.23
DDX55-202ENST00000354291 RDH5Q92781 318 aa13.64□□□□□ -0.23
DDX55-202ENST00000354291 PKP2Q99959 881 aa13.64□□□□□ -0.23
DDX55-202ENST00000354291 SLC38A1Q9H2H9 487 aa13.64□□□□□ -0.23
DDX55-202ENST00000354291 TMEM181Q9P2C4 612 aa13.64□□□□□ -0.23
DDX55-202ENST00000354291 PRDM4Q9UKN5 801 aa13.64□□□□□ -0.23
DDX55-202ENST00000354291 CORINQ9Y5Q5 1042 aa13.64□□□□□ -0.23
DDX55-202ENST00000354291 A0A0G2JMP0 313 aa13.63□□□□□ -0.23
DDX55-202ENST00000354291 A0A0X1KG70 313 aa13.63□□□□□ -0.23
DDX55-202ENST00000354291 CLDN24A6NM45 220 aa13.63□□□□□ -0.23
DDX55-202ENST00000354291 POM121CA8CG34 1229 aa13.63□□□□□ -0.23
DDX55-202ENST00000354291 BCAS1O75363 584 aaPredicted RBP13.63□□□□□ -0.23
DDX55-202ENST00000354291 MPZL1O95297 269 aa13.63□□□□□ -0.23
DDX55-202ENST00000354291 GSNP06396 782 aa13.63□□□□□ -0.23
DDX55-202ENST00000354291 CELA3BP08861 270 aa13.63□□□□□ -0.23
DDX55-202ENST00000354291 NR2F1P10589 423 aa13.63□□□□□ -0.23
DDX55-202ENST00000354291 UQCRBP14927 111 aa13.63□□□□□ -0.23
DDX55-202ENST00000354291 PAX7P23759 505 aa13.63□□□□□ -0.23
DDX55-202ENST00000354291 CDKN2CP42773 168 aa13.63□□□□□ -0.23
DDX55-202ENST00000354291 IDH2P48735 452 aaKnown RBP13.63□□□□□ -0.23
DDX55-202ENST00000354291 MAP2K6P52564 334 aa13.63□□□□□ -0.23
DDX55-202ENST00000354291 TMEM33P57088 247 aa13.63□□□□□ -0.23
DDX55-202ENST00000354291 H3F3AP84243 136 aa13.63□□□□□ -0.23
DDX55-202ENST00000354291 GSTA3Q16772 222 aa13.63□□□□□ -0.23
DDX55-202ENST00000354291 SLC9B1Q4ZJI4 515 aa13.63□□□□□ -0.23
DDX55-202ENST00000354291 PDCD4Q53EL6 469 aaKnown RBP13.63□□□□□ -0.23
DDX55-202ENST00000354291 HMGN2P46Q86SG4 172 aa13.63□□□□□ -0.23
DDX55-202ENST00000354291 ADGRG3Q86Y34 549 aa13.63□□□□□ -0.23
DDX55-202ENST00000354291 OR4M2Q8NGB6 313 aa13.63□□□□□ -0.23
DDX55-202ENST00000354291 CNOT9Q92600 299 aaKnown RBP13.63□□□□□ -0.23
DDX55-202ENST00000354291 BCL2L2Q92843 193 aaPredicted RBP13.63□□□□□ -0.23
DDX55-202ENST00000354291 MAELQ96JY0 434 aaKnown RBP13.63□□□□□ -0.23
DDX55-202ENST00000354291 ZNF275Q9NSD4 429 aaPredicted RBP13.63□□□□□ -0.23
DDX55-202ENST00000354291 CRNNQ9UBG3 495 aaPredicted RBP13.63□□□□□ -0.23
DDX55-202ENST00000354291 TRAPPC4Q9Y296 219 aa13.63□□□□□ -0.23
DDX55-202ENST00000354291 CMAHPQ9Y471 501 aa13.63□□□□□ -0.23
DDX55-202ENST00000354291 FAAHO00519 579 aa13.62□□□□□ -0.23
DDX55-202ENST00000354291 PLPP2O43688 288 aa13.62□□□□□ -0.23
DDX55-202ENST00000354291 EIF1BO60739 113 aaKnown RBP13.62□□□□□ -0.23
DDX55-202ENST00000354291 ALX3O95076 343 aa13.62□□□□□ -0.23
DDX55-202ENST00000354291 PRSS23O95084 383 aa13.62□□□□□ -0.23
DDX55-202ENST00000354291 IGLV1-44P01699 117 aa13.62□□□□□ -0.23
DDX55-202ENST00000354291 C1QCP02747 245 aa13.62□□□□□ -0.23
DDX55-202ENST00000354291 DBIP07108 87 aaKnown RBP13.62□□□□□ -0.23
DDX55-202ENST00000354291 CHRM4P08173 479 aa13.62□□□□□ -0.23
DDX55-202ENST00000354291 ACHEP22303 614 aa13.62□□□□□ -0.23
DDX55-202ENST00000354291 PRTN3P24158 256 aa13.62□□□□□ -0.23
DDX55-202ENST00000354291 POLR2HP52434 150 aaKnown RBP13.62□□□□□ -0.23
DDX55-202ENST00000354291 SLC35A1P78382 337 aa13.62□□□□□ -0.23
DDX55-202ENST00000354291 ZP4Q12836 540 aa13.62□□□□□ -0.23
DDX55-202ENST00000354291 DAG1Q14118 895 aa13.62□□□□□ -0.23
DDX55-202ENST00000354291 COX20Q5RI15 118 aa13.62□□□□□ -0.23
DDX55-202ENST00000354291 MYPOPQ86VE0 399 aaPredicted RBP13.62□□□□□ -0.23
DDX55-202ENST00000354291 PEX5LQ8IYB4 626 aa13.62□□□□□ -0.23
DDX55-202ENST00000354291 ZNF440Q8IYI8 595 aa13.62□□□□□ -0.23
DDX55-202ENST00000354291 SIGLECL1Q8N7X8 197 aa13.62□□□□□ -0.23
DDX55-202ENST00000354291 ZIC4Q8N9L1 334 aa13.62□□□□□ -0.23
DDX55-202ENST00000354291 TAF15Q92804 592 aaKnown RBP eCLIP13.62□□□□□ -0.23
DDX55-202ENST00000354291 YIPF5Q969M3 257 aa13.62□□□□□ -0.23
DDX55-202ENST00000354291 TLCD1Q96CP7 247 aa13.62□□□□□ -0.23
DDX55-202ENST00000354291 DDIT4LQ96D03 193 aa13.62□□□□□ -0.23
DDX55-202ENST00000354291 BOD1Q96IK1 185 aa13.62□□□□□ -0.23
DDX55-202ENST00000354291 ZNF385AQ96PM9 386 aaKnown RBP13.62□□□□□ -0.23
DDX55-202ENST00000354291 RMND5AQ9H871 391 aa13.62□□□□□ -0.23
DDX55-202ENST00000354291 TMBIM4Q9HC24 238 aa13.62□□□□□ -0.23
DDX55-202ENST00000354291 CALML5Q9NZT1 146 aa13.62□□□□□ -0.23
DDX55-202ENST00000354291 ZIM2Q9NZV7 527 aa13.62□□□□□ -0.23
DDX55-202ENST00000354291 TMED7-TICAM2A0A0A6YYA0 188 aa13.61□□□□□ -0.23
DDX55-202ENST00000354291 CFAP73A6NFT4 308 aa13.61□□□□□ -0.23
DDX55-202ENST00000354291 ZNF587BE7ETH6 402 aa13.61□□□□□ -0.23
DDX55-202ENST00000354291 UBDO15205 165 aa13.61□□□□□ -0.23
DDX55-202ENST00000354291 ZNF208O43345 1280 aa13.61□□□□□ -0.23
DDX55-202ENST00000354291 SYNGR3O43761 229 aa13.61□□□□□ -0.23
DDX55-202ENST00000354291 ANP32DO95626 131 aa13.61□□□□□ -0.23
DDX55-202ENST00000354291 ZCCHC18P0CG32 403 aa13.61□□□□□ -0.23
DDX55-202ENST00000354291 RPS4Y1P22090 263 aaKnown RBP13.61□□□□□ -0.23
DDX55-202ENST00000354291 IL13RA1P78552 427 aa13.61□□□□□ -0.23
DDX55-202ENST00000354291 PLAURQ03405 335 aa13.61□□□□□ -0.23
DDX55-202ENST00000354291 SNTB2Q13425 540 aaKnown RBP13.61□□□□□ -0.23
DDX55-202ENST00000354291 C3orf36Q3SXR2 165 aa13.61□□□□□ -0.23
DDX55-202ENST00000354291 DCAF12L2Q5VW00 463 aa13.61□□□□□ -0.23
DDX55-202ENST00000354291 KRT80Q6KB66 452 aa13.61□□□□□ -0.23
DDX55-202ENST00000354291 MSANTD1Q6ZTZ1 278 aa13.61□□□□□ -0.23
DDX55-202ENST00000354291 PNPT1Q8TCS8 783 aaKnown RBP13.61□□□□□ -0.23
DDX55-202ENST00000354291 TMEM45BQ96B21 275 aa13.61□□□□□ -0.23
DDX55-202ENST00000354291 MS4A5Q9H3V2 200 aa13.61□□□□□ -0.23
DDX55-202ENST00000354291 SDR39U1Q9NRG7 319 aaPredicted RBP13.61□□□□□ -0.23
DDX55-202ENST00000354291 THUMPD1Q9NXG2 353 aaKnown RBP13.61□□□□□ -0.23
DDX55-202ENST00000354291 P2RX2Q9UBL9 471 aa13.61□□□□□ -0.23
DDX55-202ENST00000354291 OSGIN1Q9UJX0 560 aa13.61□□□□□ -0.23
DDX55-202ENST00000354291 TMED7Q9Y3B3 224 aa13.61□□□□□ -0.23
DDX55-202ENST00000354291 KMT2CQ8NEZ4 4911 aaKnown RBP13.6□□□□□ -0.23
DDX55-202ENST00000354291 ARPC4-TTLL3A0A0A6YYG9 625 aa13.6□□□□□ -0.23
DDX55-202ENST00000354291 IGHV2OR16-5A0A0B4J2B6 119 aa13.6□□□□□ -0.23
DDX55-202ENST00000354291 M0R233 179 aa13.6□□□□□ -0.23
DDX55-202ENST00000354291 IMPDH2P12268 514 aa13.6□□□□□ -0.23
DDX55-202ENST00000354291 TACR3P29371 465 aa13.6□□□□□ -0.23
DDX55-202ENST00000354291 CRATP43155 626 aa13.6□□□□□ -0.23
DDX55-202ENST00000354291 ALDH3B1P43353 468 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms