RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 SLC38A2Q96QD8 506 aa15.48■□□□□ 0.07
HDDC3-201ENST00000330334 ZNF587Q96SQ5 575 aaPredicted RBP15.48■□□□□ 0.07
HDDC3-201ENST00000330334 TMEM43Q9BTV4 400 aa15.48■□□□□ 0.07
HDDC3-201ENST00000330334 PRR14Q9BWN1 585 aa15.48■□□□□ 0.07
HDDC3-201ENST00000330334 HEATR1Q9H583 2144 aaKnown RBP15.48■□□□□ 0.07
HDDC3-201ENST00000330334 KAT8Q9H7Z6 458 aaKnown RBP15.48■□□□□ 0.07
HDDC3-201ENST00000330334 SEC14L4Q9UDX3 406 aa15.48■□□□□ 0.07
HDDC3-201ENST00000330334 PMF1-BGLAPU3KQ54 211 aa15.48■□□□□ 0.07
HDDC3-201ENST00000330334 ABCA1O95477 2261 aa15.47■□□□□ 0.07
HDDC3-201ENST00000330334 IGHV1-18A0A0C4DH31 117 aa15.47■□□□□ 0.07
HDDC3-201ENST00000330334 ATP6V1G2-DDX39BF2Z307 99 aa15.47■□□□□ 0.07
HDDC3-201ENST00000330334 MS4A18H0YCH9 400 aa15.47■□□□□ 0.07
HDDC3-201ENST00000330334 AKAP8O43823 692 aaKnown RBP15.47■□□□□ 0.07
HDDC3-201ENST00000330334 SSX4O60224 188 aa15.47■□□□□ 0.07
HDDC3-201ENST00000330334 IGLV1-44P01699 117 aa15.47■□□□□ 0.07
HDDC3-201ENST00000330334 AQP1P29972 269 aa15.47■□□□□ 0.07
HDDC3-201ENST00000330334 NUDT6P53370 316 aa15.47■□□□□ 0.07
HDDC3-201ENST00000330334 ROR2Q01974 943 aaKnown RBP15.47■□□□□ 0.07
HDDC3-201ENST00000330334 SWI5Q1ZZU3 235 aa15.47■□□□□ 0.07
HDDC3-201ENST00000330334 MS4A18Q3C1V0 323 aa15.47■□□□□ 0.07
HDDC3-201ENST00000330334 ZNF613Q6PF04 617 aa15.47■□□□□ 0.07
HDDC3-201ENST00000330334 LINC00114Q6XXX2 140 aa15.47■□□□□ 0.07
HDDC3-201ENST00000330334 DHDDSQ86SQ9 333 aa15.47■□□□□ 0.07
HDDC3-201ENST00000330334 RETREG3Q86VR2 466 aa15.47■□□□□ 0.07
HDDC3-201ENST00000330334 PIK3C3Q8NEB9 887 aa15.47■□□□□ 0.07
HDDC3-201ENST00000330334 LRR1Q96L50 414 aa15.47■□□□□ 0.07
HDDC3-201ENST00000330334 NELFAQ9H3P2 528 aa15.47■□□□□ 0.07
HDDC3-201ENST00000330334 MRGBPQ9NV56 204 aa15.47■□□□□ 0.07
HDDC3-201ENST00000330334 MOKQ9UQ07 419 aa15.47■□□□□ 0.07
HDDC3-201ENST00000330334 SONP18583 2426 aaKnown RBP15.46■□□□□ 0.07
HDDC3-201ENST00000330334 M0QX08 132 aa15.46■□□□□ 0.07
HDDC3-201ENST00000330334 TRAF3IP2O43734 574 aaPredicted RBP15.46■□□□□ 0.07
HDDC3-201ENST00000330334 TLX2O43763 284 aaPredicted RBP15.46■□□□□ 0.07
HDDC3-201ENST00000330334 IGKV3-15P01624 115 aa15.46■□□□□ 0.07
HDDC3-201ENST00000330334 CRYAAP02489 173 aa15.46■□□□□ 0.07
HDDC3-201ENST00000330334 DUSP7Q16829 419 aa15.46■□□□□ 0.07
HDDC3-201ENST00000330334 CYP51A1Q16850 503 aa15.46■□□□□ 0.07
HDDC3-201ENST00000330334 MST1LQ2TV78 715 aa15.46■□□□□ 0.07
HDDC3-201ENST00000330334 CLEC2AQ6UVW9 174 aa15.46■□□□□ 0.07
HDDC3-201ENST00000330334 NHLRC1Q6VVB1 395 aa15.46■□□□□ 0.07
HDDC3-201ENST00000330334 TMEM123Q8N131 208 aa15.46■□□□□ 0.07
HDDC3-201ENST00000330334 GPR137CQ8N3F9 429 aa15.46■□□□□ 0.07
HDDC3-201ENST00000330334 OR2M2Q96R28 347 aa15.46■□□□□ 0.07
HDDC3-201ENST00000330334 ARHGDIGQ99819 225 aa15.46■□□□□ 0.07
HDDC3-201ENST00000330334 WFDC6Q9BQY6 131 aa15.46■□□□□ 0.07
HDDC3-201ENST00000330334 GPR35Q9HC97 309 aa15.46■□□□□ 0.07
HDDC3-201ENST00000330334 NPHS2Q9NP85 383 aa15.46■□□□□ 0.07
HDDC3-201ENST00000330334 MRPL39Q9NYK5 338 aaKnown RBP15.46■□□□□ 0.07
HDDC3-201ENST00000330334 CRLF1O75462 422 aa15.45■□□□□ 0.06
HDDC3-201ENST00000330334 PDE5AO76074 875 aa15.45■□□□□ 0.06
HDDC3-201ENST00000330334 MT-ATP6P00846 226 aa15.45■□□□□ 0.06
HDDC3-201ENST00000330334 BGLAPP02818 100 aa15.45■□□□□ 0.06
HDDC3-201ENST00000330334 TP53P04637 393 aaPredicted RBP15.45■□□□□ 0.06
HDDC3-201ENST00000330334 CBR1P16152 277 aa15.45■□□□□ 0.06
HDDC3-201ENST00000330334 EFNA4P52798 201 aa15.45■□□□□ 0.06
HDDC3-201ENST00000330334 CDH12P55289 794 aa15.45■□□□□ 0.06
HDDC3-201ENST00000330334 ARF1P84077 181 aaKnown RBP15.45■□□□□ 0.06
HDDC3-201ENST00000330334 PXKQ7Z7A4 578 aa15.45■□□□□ 0.06
HDDC3-201ENST00000330334 PATL1Q86TB9 770 aaKnown RBP15.45■□□□□ 0.06
HDDC3-201ENST00000330334 PRIMA1Q86XR5 153 aa15.45■□□□□ 0.06
HDDC3-201ENST00000330334 UEVLDQ8IX04 471 aa15.45■□□□□ 0.06
HDDC3-201ENST00000330334 SMYD1Q8NB12 490 aa15.45■□□□□ 0.06
HDDC3-201ENST00000330334 MAPK1IP1LQ8NDC0 245 aa15.45■□□□□ 0.06
HDDC3-201ENST00000330334 THOC1Q96FV9 657 aaKnown RBP15.45■□□□□ 0.06
HDDC3-201ENST00000330334 KCNS3Q9BQ31 491 aa15.45■□□□□ 0.06
HDDC3-201ENST00000330334 ASPNQ9BXN1 380 aa15.45■□□□□ 0.06
HDDC3-201ENST00000330334 FBXO9Q9UK97 447 aaPredicted RBP15.45■□□□□ 0.06
HDDC3-201ENST00000330334 NOX1Q9Y5S8 564 aa15.45■□□□□ 0.06
HDDC3-201ENST00000330334 ANK3Q12955 4377 aaKnown RBP15.44■□□□□ 0.06
HDDC3-201ENST00000330334 IGHV4-30-2A0A087WSY4 118 aa15.44■□□□□ 0.06
HDDC3-201ENST00000330334 A0A096LNT2 108 aa15.44■□□□□ 0.06
HDDC3-201ENST00000330334 A0A096LPE4 126 aa15.44■□□□□ 0.06
HDDC3-201ENST00000330334 A0A0G2JND7 137 aa15.44■□□□□ 0.06
HDDC3-201ENST00000330334 A0A1W2PPZ6 126 aa15.44■□□□□ 0.06
HDDC3-201ENST00000330334 ZNF99A8MXY4 864 aaPredicted RBP15.44■□□□□ 0.06
HDDC3-201ENST00000330334 CD5LO43866 347 aa15.44■□□□□ 0.06
HDDC3-201ENST00000330334 F12P00748 615 aaPredicted RBP15.44■□□□□ 0.06
HDDC3-201ENST00000330334 CSF3P09919 207 aa15.44■□□□□ 0.06
HDDC3-201ENST00000330334 NQO1P15559 274 aaKnown RBP15.44■□□□□ 0.06
HDDC3-201ENST00000330334 PCGF2P35227 344 aa15.44■□□□□ 0.06
HDDC3-201ENST00000330334 SERPINF1P36955 418 aa15.44■□□□□ 0.06
HDDC3-201ENST00000330334 MTPNP58546 118 aa15.44■□□□□ 0.06
HDDC3-201ENST00000330334 NAAAQ02083 359 aa15.44■□□□□ 0.06
HDDC3-201ENST00000330334 NFYCQ13952 458 aa15.44■□□□□ 0.06
HDDC3-201ENST00000330334 SELPLGQ14242 412 aa15.44■□□□□ 0.06
HDDC3-201ENST00000330334 INTS11Q5TA45 600 aaKnown RBP15.44■□□□□ 0.06
HDDC3-201ENST00000330334 ZNF627Q7L945 461 aa15.44■□□□□ 0.06
HDDC3-201ENST00000330334 C20orf196Q8IYI0 205 aa15.44■□□□□ 0.06
HDDC3-201ENST00000330334 IL17RDQ8NFM7 739 aa15.44■□□□□ 0.06
HDDC3-201ENST00000330334 GPR32P1Q8NGA4 272 aa15.44■□□□□ 0.06
HDDC3-201ENST00000330334 OR4F15Q8NGB8 312 aa15.44■□□□□ 0.06
HDDC3-201ENST00000330334 MCHR1Q99705 422 aa15.44■□□□□ 0.06
HDDC3-201ENST00000330334 PCDHAC1Q9H158 963 aa15.44■□□□□ 0.06
HDDC3-201ENST00000330334 CRLF2Q9HC73 371 aa15.44■□□□□ 0.06
HDDC3-201ENST00000330334 CA10Q9NS85 328 aa15.44■□□□□ 0.06
HDDC3-201ENST00000330334 PLPP3O14495 311 aa15.43■□□□□ 0.06
HDDC3-201ENST00000330334 CHP2O43745 196 aa15.43■□□□□ 0.06
HDDC3-201ENST00000330334 HPRP00739 348 aa15.43■□□□□ 0.06
HDDC3-201ENST00000330334 NPPAP01160 153 aa15.43■□□□□ 0.06
HDDC3-201ENST00000330334 CECR9P0C854 216 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms