RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 FLRT3Q9NZU0 649 aa12.21□□□□□ -0.46
TNFRSF21-201ENST00000296861 MED11Q9P086 117 aa12.21□□□□□ -0.46
TNFRSF21-201ENST00000296861 COL4A6Q14031 1691 aa12.21□□□□□ -0.46
TNFRSF21-201ENST00000296861 TSPAN11A1L157 253 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 C17orf51A8MQB3 221 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 PDCD5O14737 125 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 KCNAB3O43448 404 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 CTNSO60931 367 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 APBB3O95704 486 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 FAM157BP0CG42 384 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 UGT2B7P16662 529 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 MAOAP21397 527 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 MAP3K8P41279 467 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 RPL35P42766 123 aaKnown RBP12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 RPS15AP62244 130 aaKnown RBP12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 BTG2P78543 158 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 PLA2G7Q13093 441 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 CBFBQ13951 182 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 METTL11BQ5VVY1 283 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 GPR139Q6DWJ6 353 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 OR7E24Q6IFN5 339 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 DGAT2L6Q6ZPD8 337 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 SHISA6Q6ZSJ9 500 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 ZNF765Q7L2R6 523 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 GALNTL5Q7Z4T8 443 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 PRSS42Q7Z5A4 293 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 TPRA1Q86W33 373 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 OR51A4Q8NGJ6 313 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 SORCS2Q96PQ0 1159 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 ZFYVE21Q9BQ24 234 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 MFFQ9GZY8 342 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 GRHPRQ9UBQ7 328 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 CAMK2AQ9UQM7 478 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 VPS13AQ96RL7 3174 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 FITM1A5D6W6 292 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 ADAM11O75078 769 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 EN2P19622 333 aaPredicted RBP12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 PTBP1P26599 531 aaKnown RBP eCLIP12.2□□□□□ -0.469e-25■■■■■ 46.6
TNFRSF21-201ENST00000296861 LTBQ06643 244 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 GRM7Q14831 915 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 TMEM52BQ4KMG9 183 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 TRAF4Q9BUZ4 470 aaPredicted RBP12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 COMMD9Q9P000 198 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 CES1P1Q9UKY3 287 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 RP1L1Q8IWN7 2480 aaPredicted RBP12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 EEF1E1-BLOC1S5C9J1V9 151 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 XKRYO14609 159 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 PLPP2O43688 288 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 GPR75O95800 540 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 NGFRP08138 427 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 ACHEP22303 614 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 THBS2P35442 1172 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 LBX1P52954 281 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 ITPRIPL2Q3MIP1 535 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 ARHGAP40Q5TG30 622 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 ZNF776Q68DI1 518 aaPredicted RBP12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 FAM122CQ6P4D5 195 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 TRILQ7L0X0 811 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 GLB1L2Q8IW92 636 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 AVL9Q8NBF6 648 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 OR4D10Q8NGI6 311 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 SMIM19Q96E16 107 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 MRPL48Q96GC5 212 aaKnown RBP12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 COMMD4Q9H0A8 199 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 Q9N2J8 555 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 COPZ2Q9P299 210 aa12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 CGGBP1Q9UFW8 167 aaPredicted RBP12.2□□□□□ -0.46
TNFRSF21-201ENST00000296861 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.19□□□□□ -0.46
TNFRSF21-201ENST00000296861 IFITM5A6NNB3 132 aa12.19□□□□□ -0.46
TNFRSF21-201ENST00000296861 HCRTR2O43614 444 aa12.19□□□□□ -0.46
TNFRSF21-201ENST00000296861 CDC40O60508 579 aaKnown RBP eCLIP12.19□□□□□ -0.46
TNFRSF21-201ENST00000296861 FGF19O95750 216 aa12.19□□□□□ -0.46
TNFRSF21-201ENST00000296861 AMY2AP04746 511 aa12.19□□□□□ -0.46
TNFRSF21-201ENST00000296861 CA3P07451 260 aa12.19□□□□□ -0.46
TNFRSF21-201ENST00000296861 TUSC1Q2TAM9 212 aa12.19□□□□□ -0.46
TNFRSF21-201ENST00000296861 OLFML2AQ68BL7 652 aa12.19□□□□□ -0.46
TNFRSF21-201ENST00000296861 ZNF454Q8N9F8 522 aa12.19□□□□□ -0.46
TNFRSF21-201ENST00000296861 RAB7BQ96AH8 199 aa12.19□□□□□ -0.46
TNFRSF21-201ENST00000296861 GIMAP5Q96F15 307 aa12.19□□□□□ -0.46
TNFRSF21-201ENST00000296861 COX14Q96I36 57 aa12.19□□□□□ -0.46
TNFRSF21-201ENST00000296861 SOSTQ9BQB4 213 aa12.19□□□□□ -0.46
TNFRSF21-201ENST00000296861 CFHR5Q9BXR6 569 aa12.19□□□□□ -0.46
TNFRSF21-201ENST00000296861 ABRACLQ9P1F3 81 aa12.19□□□□□ -0.46
TNFRSF21-201ENST00000296861 FBXO4Q9UKT5 387 aa12.19□□□□□ -0.46
TNFRSF21-201ENST00000296861 FRKP42685 505 aaPredicted RBP12.19□□□□□ -0.46
TNFRSF21-201ENST00000296861 SPOCK1Q08629 439 aa12.19□□□□□ -0.46
TNFRSF21-201ENST00000296861 ARHGAP11BQ3KRB8 267 aa12.19□□□□□ -0.46
TNFRSF21-201ENST00000296861 CLLU1Q5K131 121 aa12.19□□□□□ -0.46
TNFRSF21-201ENST00000296861 OR6M1Q8NGM8 313 aa12.19□□□□□ -0.46
TNFRSF21-201ENST00000296861 ASB12Q8WXK4 309 aa12.19□□□□□ -0.46
TNFRSF21-201ENST00000296861 CPNE2Q96FN4 548 aaPredicted RBP12.19□□□□□ -0.46
TNFRSF21-201ENST00000296861 ADOQ96SZ5 270 aa12.19□□□□□ -0.46
TNFRSF21-201ENST00000296861 TCEAL2Q9H3H9 227 aaPredicted RBP12.19□□□□□ -0.46
TNFRSF21-201ENST00000296861 SYNDIG1Q9H7V2 258 aa12.19□□□□□ -0.46
TNFRSF21-201ENST00000296861 OR2S2Q9NQN1 319 aa12.19□□□□□ -0.46
TNFRSF21-201ENST00000296861 NTMQ9P121 344 aa12.19□□□□□ -0.46
TNFRSF21-201ENST00000296861 SLC22A13Q9Y226 551 aa12.19□□□□□ -0.46
TNFRSF21-201ENST00000296861 DTX4Q9Y2E6 619 aa12.19□□□□□ -0.46
TNFRSF21-201ENST00000296861 C2orf72A6NCS6 295 aa12.19□□□□□ -0.46
TNFRSF21-201ENST00000296861 ZNF28P17035 718 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms