RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 SLC22A31A6NKX4 558 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 OR6C76A6NM76 312 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 CLDN25C9JDP6 229 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 TO15178 435 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 EFNA2O43921 213 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 SNX4O95219 450 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 CCL3P10147 92 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 SPI1P17947 270 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 ACP1P24666 158 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 ADH7P40394 386 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 OC90Q02509 493 aaPredicted RBP3.11□□□□□ -1.91
LIG4-205ENST00000614526 C17orf67Q0P5P2 114 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 MLLT11Q13015 90 aaPredicted RBP3.11□□□□□ -1.91
LIG4-205ENST00000614526 HNRNPA0Q13151 305 aaKnown RBP3.11□□□□□ -1.91
LIG4-205ENST00000614526 DNASE1L3Q13609 305 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 TGIF1Q15583 401 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 MEP1BQ16820 701 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 ISXQ2M1V0 245 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 SLC25A30Q5SVS4 291 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 C1orf140Q5VVS0 124 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 TMEM205Q6UW68 189 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 DPY19L2P2Q6ZN68 376 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 SLC35D2Q76EJ3 337 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 GID4Q8IVV7 300 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 OR6Q1Q8NGQ2 317 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 CT55Q8WUE5 264 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 C5orf34Q96MH7 638 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 TSPAN32Q96QS1 320 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 ARHGAP9Q9BRR9 750 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 ZNF649Q9BS31 505 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 BARHL1Q9BZE3 327 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 SEMA4CQ9C0C4 833 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 TSPAN10Q9H1Z9 355 aaPredicted RBP3.11□□□□□ -1.91
LIG4-205ENST00000614526 WDR76Q9H967 626 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 ADGRL4Q9HBW9 690 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 ABCB9Q9NP78 766 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 MED17Q9NVC6 651 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 MED29Q9NX70 200 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 TAS2R5Q9NYW4 299 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 CLEC4AQ9UMR7 237 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 GTF2A1LQ9UNN4 478 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 N6AMT1Q9Y5N5 214 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 FRYQ5TBA9 3013 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 EML6Q6ZMW3 1958 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 IGHV1-45A0A0A0MS14 117 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 SHISA3A0PJX4 238 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 A6NL46 340 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 C9orf172C9J069 976 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 H0YC42 278 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 SLC30A4O14863 429 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 CASKO14936 926 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 TBX1O43435 398 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 EIF4E2O60573 245 aaKnown RBP3.11□□□□□ -1.91
LIG4-205ENST00000614526 MPZL1O95297 269 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 AHSA1O95433 338 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 CD14P08571 375 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 INHBBP09529 407 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 ASAH2BP0C7U1 165 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 COX6A1P12074 109 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 PRKCAP17252 672 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 SHC1P29353 583 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 CASP3P42574 277 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 SLC6A8P48029 635 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 DNASE1L1P49184 302 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 POLR2HP52434 150 aaKnown RBP3.11□□□□□ -1.91
LIG4-205ENST00000614526 SH3BGRP55822 239 aaPredicted RBP3.11□□□□□ -1.91
LIG4-205ENST00000614526 PRPS1P60891 318 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 IFITM3Q01628 133 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 ZNF85Q03923 595 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 FMODQ06828 376 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 CHAF1BQ13112 559 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 KRR1Q13601 381 aaKnown RBP3.11□□□□□ -1.91
LIG4-205ENST00000614526 ACKR1Q16570 336 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 ZNF829Q3KNS6 432 aaPredicted RBP3.11□□□□□ -1.91
LIG4-205ENST00000614526 TIMM50Q3ZCQ8 353 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 MESTQ5EB52 335 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 ATP1A1-AS1Q5TC04 95 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 HES3Q5TGS1 186 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 CARD17Q5XLA6 110 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 RPL13AP3Q6NVV1 102 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 C6orf15Q6UXA7 325 aaPredicted RBP3.11□□□□□ -1.91
LIG4-205ENST00000614526 TMPRSS11AQ6ZMR5 421 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 LRRC69Q6ZNQ3 347 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 DPY19L4Q7Z388 723 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 RPS19BP1Q86WX3 136 aaKnown RBP3.11□□□□□ -1.91
LIG4-205ENST00000614526 WDFY1Q8IWB7 410 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 OR6V1Q8N148 313 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 UBE2J2Q8N2K1 259 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 DEFB124Q8NES8 71 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 KBTBD8Q8NFY9 601 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 OR4K17Q8NGC6 315 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 OR2Y1Q8NGV0 311 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 OR6N2Q8NGY6 317 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 THEM6Q8WUY1 208 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 ASB15Q8WXK1 588 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 HSD17B8Q92506 261 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 TXNDC15Q96J42 360 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 CEP19Q96LK0 163 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 OR5B2Q96R09 309 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 TIMP4Q99727 224 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms