RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 TIMM50Q3ZCQ8 353 aa12.46□□□□□ -0.41
TPM1-215ENST00000558868 GLYR1Q49A26 553 aaPredicted RBP12.46□□□□□ -0.41
TPM1-215ENST00000558868 DCAF10Q5QP82 559 aa12.46□□□□□ -0.41
TPM1-215ENST00000558868 ABHD17BQ5VST6 288 aa12.46□□□□□ -0.41
TPM1-215ENST00000558868 PRAMEF20Q5VT98 475 aa12.46□□□□□ -0.41
TPM1-215ENST00000558868 C3orf33Q6P1S2 294 aa12.46□□□□□ -0.41
TPM1-215ENST00000558868 TMPRSS7Q7RTY8 843 aa12.46□□□□□ -0.41
TPM1-215ENST00000558868 DTX1Q86Y01 620 aa12.46□□□□□ -0.41
TPM1-215ENST00000558868 SIRT6Q8N6T7 355 aa12.46□□□□□ -0.41
TPM1-215ENST00000558868 CLEC1AQ8NC01 280 aa12.46□□□□□ -0.41
TPM1-215ENST00000558868 ZNF248Q8NDW4 579 aa12.46□□□□□ -0.41
TPM1-215ENST00000558868 BBS1Q8NFJ9 593 aa12.46□□□□□ -0.41
TPM1-215ENST00000558868 OR4K13Q8NH42 304 aa12.46□□□□□ -0.41
TPM1-215ENST00000558868 MYCBPQ99417 103 aaPredicted RBP12.46□□□□□ -0.41
TPM1-215ENST00000558868 TEAD3Q99594 435 aa12.46□□□□□ -0.41
TPM1-215ENST00000558868 OR51V1Q9H2C8 321 aa12.46□□□□□ -0.41
TPM1-215ENST00000558868 MED20Q9H944 212 aa12.46□□□□□ -0.41
TPM1-215ENST00000558868 INIPQ9NRY2 104 aa12.46□□□□□ -0.41
TPM1-215ENST00000558868 PCDHGB7Q9Y5F8 929 aa12.46□□□□□ -0.41
TPM1-215ENST00000558868 CCDC182A6NF36 153 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 CYSRT1A8MQ03 144 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 M0R082 166 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 CCRL2O00421 344 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 CBR3O75828 277 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 RENP00797 406 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 SCG5P05408 212 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 HSMCR30P0CW71 290 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 LIPCP11150 499 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 LIFP15018 202 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 SLC2A5P22732 501 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 ETV1P50549 477 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 SLC16A1P53985 500 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 WNT4P56705 351 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 ACTC1P68032 377 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 ACTA1P68133 377 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 ZP4Q12836 540 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 MLLT11Q13015 90 aaPredicted RBP12.45□□□□□ -0.42
TPM1-215ENST00000558868 SELENBP1Q13228 472 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 PON3Q15166 354 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 C1QL3Q5VWW1 255 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 TIGD3Q6B0B8 471 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 TMPRSS11AQ6ZMR5 421 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 FAM122BQ7Z309 247 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 GTPBP8Q8N3Z3 284 aaPredicted RBP12.45□□□□□ -0.42
TPM1-215ENST00000558868 KLHL36Q8N4N3 616 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 POMGNT2Q8NAT1 580 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 NPEPL1Q8NDH3 523 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 SDR9C7Q8NEX9 313 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 MRPL48Q96GC5 212 aaKnown RBP12.45□□□□□ -0.42
TPM1-215ENST00000558868 SNX18Q96RF0 628 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 OR11A1Q9GZK7 315 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 NAA50Q9GZZ1 169 aaKnown RBP12.45□□□□□ -0.42
TPM1-215ENST00000558868 TIMMDC1Q9NPL8 285 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 KLHL1Q9NR64 748 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 TAS2R16Q9NYV7 291 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 STMN3Q9NZ72 180 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 IL17BQ9UHF5 180 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 CLEC2DQ9UHP7 191 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 FBXL2Q9UKC9 423 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 MOKQ9UQ07 419 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 LSM2Q9Y333 95 aaKnown RBP12.45□□□□□ -0.42
TPM1-215ENST00000558868 ADAM18Q9Y3Q7 739 aa12.45□□□□□ -0.42
TPM1-215ENST00000558868 MRPS18BQ9Y676 258 aaKnown RBP12.45□□□□□ -0.42
TPM1-215ENST00000558868 TEX13CA0A0J9YWL9 993 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 A0A1W2PRG6 482 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 B4DXG7 233 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 FTCDNL1E5RQL4 147 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 PLPP3O14495 311 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 XKRYO14609 159 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 RNF13O43567 381 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 ATE1O95260 518 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 IGHMP01871 453 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 ZNF17P17021 662 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 DPP4P27487 766 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 TGFBR2P37173 567 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 LIPAP38571 399 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 RGS6P49758 472 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 RRADP55042 308 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 OC90Q02509 493 aaPredicted RBP12.44□□□□□ -0.42
TPM1-215ENST00000558868 KRR1Q13601 381 aaKnown RBP12.44□□□□□ -0.42
TPM1-215ENST00000558868 GXYLT1Q4G148 440 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 B3GNTL1Q67FW5 361 aaPredicted RBP12.44□□□□□ -0.42
TPM1-215ENST00000558868 SLC6A19Q695T7 634 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 LEG1Q6P5S2 330 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 SLC16A12Q6ZSM3 486 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 H1FNTQ75WM6 255 aaPredicted RBP12.44□□□□□ -0.42
TPM1-215ENST00000558868 ADCK1Q86TW2 530 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 BEST3Q8N1M1 668 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 ACBD7Q8N6N7 88 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 CYB561A3Q8NBI2 242 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 LSM14AQ8ND56 463 aaKnown RBP12.44□□□□□ -0.42
TPM1-215ENST00000558868 OR4F15Q8NGB8 312 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 OR51G2Q8NGK0 314 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 OR52N1Q8NH53 320 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 POC1BQ8TC44 478 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 PSMF1Q92530 271 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 Q96M85 177 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 OR5M11Q96RB7 305 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 NMNAT2Q9BZQ4 307 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 ASCL3Q9NQ33 180 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms