RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 OR1E2P47887 323 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 CSNK1A1P48729 337 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 SRYQ05066 204 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 EGR3Q06889 387 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 PLA2G7Q13093 441 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 ACSM3Q53FZ2 586 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 ENTPD8Q5MY95 495 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 LHX8Q68G74 356 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 SLC22A25Q6T423 547 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 Q6ZNX1 250 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 NETO2Q8NC67 525 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 OR8K3Q8NH51 312 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 KCNG3Q8TAE7 436 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 CASTOR1Q8WTX7 329 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 CORO2AQ92828 525 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 GCDHQ92947 438 aaPredicted RBP7.26□□□□□ -1.25
VPS13D-211ENST00000543710 SLC39A13Q96H72 371 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 ZNF582Q96NG8 517 aaPredicted RBP7.26□□□□□ -1.25
VPS13D-211ENST00000543710 ASB16Q96NS5 453 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 GNRHR2Q96P88 292 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 CNTNAP3Q9BZ76 1288 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 PATZ1Q9HBE1 687 aaKnown RBP7.26□□□□□ -1.25
VPS13D-211ENST00000543710 ASF1BQ9NVP2 202 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 RBFOX1Q9NWB1 397 aaKnown RBP7.26□□□□□ -1.25
VPS13D-211ENST00000543710 GFOD1Q9NXC2 390 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 SLCO3A1Q9UIG8 710 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.26□□□□□ -1.25
VPS13D-211ENST00000543710 LOC100289279A0A1B0GTE1 492 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 NPIPB15A6NHN6 443 aaPredicted RBP7.25□□□□□ -1.25
VPS13D-211ENST00000543710 SULT1C4O75897 302 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 OR2F2O95006 317 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 CH25HO95992 272 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 LAMP1P11279 417 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 GDF5P43026 501 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 ADARB1P78563 741 aaKnown RBP7.25□□□□□ -1.25
VPS13D-211ENST00000543710 BAMBIQ13145 260 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 OR2F1Q13607 317 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 ZNF528Q3MIS6 628 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 CLLU1OSQ5K130 101 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 PXDC1Q5TGL8 231 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 ADGRE4PQ86SQ3 457 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 ENTHD1Q8IYW4 607 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 SLC25A43Q8WUT9 341 aaPredicted RBP7.25□□□□□ -1.25
VPS13D-211ENST00000543710 MICU1Q9BPX6 476 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 MARCH4Q9P2E8 410 aaPredicted RBP7.25□□□□□ -1.25
VPS13D-211ENST00000543710 RHCGQ9UBD6 479 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 KPTNQ9Y664 436 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 METTL12A8MUP2 240 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 ABHD16AO95870 558 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 PYCR1P32322 319 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 GPR4P46093 362 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 STT3AP46977 705 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 RAB11AP62491 216 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 Q499Y3 187 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 ZMAT1Q5H9K5 638 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 KDM4DQ6B0I6 523 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 SSX8Q7RTT4 187 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 GPRIN1Q7Z2K8 1008 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 NAGSQ8N159 534 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 BPIFA2Q96DR5 249 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 SLC41A2Q96JW4 573 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 PITX2Q99697 317 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 INPP5KQ9BT40 448 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 CHRDL1Q9BU40 450 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 PIGMQ9H3S5 423 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 ZNF71Q9NQZ8 489 aaPredicted RBP7.25□□□□□ -1.25
VPS13D-211ENST00000543710 C14orf119Q9NWQ9 140 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 CACNA1SQ13698 1873 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 TVP23AA6NH52 213 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 TBX18O95935 607 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 POU2F2P09086 479 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 BDKRB2P30411 391 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 PIGAP37287 484 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 SGSHP51688 502 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 AFMIDQ63HM1 303 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 SERPINA12Q8IW75 414 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 SLC22A24Q8N4F4 322 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 STT3BQ8TCJ2 826 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 HPSE2Q8WWQ2 592 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 ESAMQ96AP7 390 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 OR6C1Q96RD1 312 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 F2RL3Q96RI0 385 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 WDR77Q9BQA1 342 aaPredicted RBP7.25□□□□□ -1.25
VPS13D-211ENST00000543710 CDCA4Q9BXL8 241 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 BEX2Q9BXY8 128 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 CTPS2Q9NRF8 586 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 DECR2Q9NUI1 292 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 QSER1Q2KHR3 1735 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.25□□□□□ -1.25
VPS13D-211ENST00000543710 SNRPGP15A8MWD9 76 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 LALBAP00709 142 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 SERPINA5P05154 406 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 FUT1P19526 365 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 TGM1P22735 817 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 CX3CR1P49238 355 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 SSR4P51571 173 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 ZP2Q05996 745 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 LAPTM4AQ15012 233 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 ZNF674Q2M3X9 581 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms