RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 LSRQ86X29 649 aaPredicted RBP17.26■□□□□ 0.35
DDX55-207ENST00000540763 OR9K2Q8NGE7 335 aa17.26■□□□□ 0.35
DDX55-207ENST00000540763 OR5J2Q8NH18 312 aa17.26■□□□□ 0.35
DDX55-207ENST00000540763 RHCGQ9UBD6 479 aa17.26■□□□□ 0.35
DDX55-207ENST00000540763 NOSIPQ9Y314 301 aaKnown RBP17.26■□□□□ 0.35
DDX55-207ENST00000540763 FREM1Q5H8C1 2179 aa17.25■□□□□ 0.35
DDX55-207ENST00000540763 KPNA4O00629 521 aaPredicted RBP17.25■□□□□ 0.35
DDX55-207ENST00000540763 ASAH2BP0C7U1 165 aa17.25■□□□□ 0.35
DDX55-207ENST00000540763 IGFBP2P18065 325 aa17.25■□□□□ 0.35
DDX55-207ENST00000540763 PTNP21246 168 aa17.25■□□□□ 0.35
DDX55-207ENST00000540763 SORDQ00796 357 aa17.25■□□□□ 0.35
DDX55-207ENST00000540763 TFAP2EQ6VUC0 442 aa17.25■□□□□ 0.35
DDX55-207ENST00000540763 BEND4Q6ZU67 534 aa17.25■□□□□ 0.35
DDX55-207ENST00000540763 SLC46A3Q7Z3Q1 461 aa17.25■□□□□ 0.35
DDX55-207ENST00000540763 NUFIP2Q7Z417 695 aaKnown RBP17.25■□□□□ 0.35
DDX55-207ENST00000540763 C10orf53Q8N6V4 93 aa17.25■□□□□ 0.35
DDX55-207ENST00000540763 PFN4Q8NHR9 129 aa17.25■□□□□ 0.35
DDX55-207ENST00000540763 SLC7A13Q8TCU3 470 aa17.25■□□□□ 0.35
DDX55-207ENST00000540763 SGTBQ96EQ0 304 aa17.25■□□□□ 0.35
DDX55-207ENST00000540763 OXGR1Q96P68 337 aa17.25■□□□□ 0.35
DDX55-207ENST00000540763 SEPHS2Q99611 448 aa17.25■□□□□ 0.35
DDX55-207ENST00000540763 RBM24Q9BX46 236 aaKnown RBP17.25■□□□□ 0.35
DDX55-207ENST00000540763 NPDC1Q9NQX5 325 aaPredicted RBP17.25■□□□□ 0.35
DDX55-207ENST00000540763 PARPBPQ9NWS1 579 aa17.25■□□□□ 0.35
DDX55-207ENST00000540763 ELOVL5Q9NYP7 299 aa17.25■□□□□ 0.35
DDX55-207ENST00000540763 B3GAT1Q9P2W7 334 aa17.25■□□□□ 0.35
DDX55-207ENST00000540763 A0A087WUU8 490 aa17.24■□□□□ 0.35
DDX55-207ENST00000540763 OR7A10O76100 309 aa17.24■□□□□ 0.35
DDX55-207ENST00000540763 CH25HO95992 272 aa17.24■□□□□ 0.35
DDX55-207ENST00000540763 RAP2AP10114 183 aa17.24■□□□□ 0.35
DDX55-207ENST00000540763 OR3A2P47893 321 aa17.24■□□□□ 0.35
DDX55-207ENST00000540763 PUDPQ08623 228 aa17.24■□□□□ 0.35
DDX55-207ENST00000540763 ZP4Q12836 540 aa17.24■□□□□ 0.35
DDX55-207ENST00000540763 ZNF730Q6ZMV8 503 aa17.24■□□□□ 0.35
DDX55-207ENST00000540763 MBOAT2Q6ZWT7 520 aa17.24■□□□□ 0.35
DDX55-207ENST00000540763 YTHDF3Q7Z739 585 aaKnown RBP17.24■□□□□ 0.35
DDX55-207ENST00000540763 LUZP2Q86TE4 346 aa17.24■□□□□ 0.35
DDX55-207ENST00000540763 GPAT4Q86UL3 456 aa17.24■□□□□ 0.35
DDX55-207ENST00000540763 KIF18BQ86Y91 864 aa17.24■□□□□ 0.35
DDX55-207ENST00000540763 FUZQ9BT04 418 aa17.24■□□□□ 0.35
DDX55-207ENST00000540763 ENKD1Q9H0I2 346 aa17.24■□□□□ 0.35
DDX55-207ENST00000540763 OPN3Q9H1Y3 402 aaPredicted RBP17.24■□□□□ 0.35
DDX55-207ENST00000540763 SLC24A3Q9HC58 644 aa17.24■□□□□ 0.35
DDX55-207ENST00000540763 TMEM5Q9Y2B1 443 aa17.24■□□□□ 0.35
DDX55-207ENST00000540763 TCRBV3S1A0A5B6 114 aa17.23■□□□□ 0.35
DDX55-207ENST00000540763 DHRS12A0PJE2 317 aa17.23■□□□□ 0.35
DDX55-207ENST00000540763 PLPP3O14495 311 aa17.23■□□□□ 0.35
DDX55-207ENST00000540763 KRT36O76013 467 aa17.23■□□□□ 0.35
DDX55-207ENST00000540763 GADD45GO95257 159 aa17.23■□□□□ 0.35
DDX55-207ENST00000540763 TSPAN19P0C672 248 aa17.23■□□□□ 0.35
DDX55-207ENST00000540763 NQO1P15559 274 aaKnown RBP17.23■□□□□ 0.35
DDX55-207ENST00000540763 ZNF43P17038 809 aa17.23■□□□□ 0.35
DDX55-207ENST00000540763 SPIBQ01892 262 aa17.23■□□□□ 0.35
DDX55-207ENST00000540763 PRKCDQ05655 676 aa17.23■□□□□ 0.35
DDX55-207ENST00000540763 PMS2P3Q13401 168 aa17.23■□□□□ 0.35
DDX55-207ENST00000540763 GK3PQ14409 553 aa17.23■□□□□ 0.35
DDX55-207ENST00000540763 ANKDD1AQ495B1 522 aa17.23■□□□□ 0.35
DDX55-207ENST00000540763 ZNF474Q6S9Z5 364 aaPredicted RBP17.23■□□□□ 0.35
DDX55-207ENST00000540763 CREB3L2Q70SY1 520 aa17.23■□□□□ 0.35
DDX55-207ENST00000540763 RRM2BQ7LG56 351 aa17.23■□□□□ 0.35
DDX55-207ENST00000540763 ADGRG5Q8IZF4 528 aa17.23■□□□□ 0.35
DDX55-207ENST00000540763 ZNF610Q8N9Z0 462 aa17.23■□□□□ 0.35
DDX55-207ENST00000540763 BPIFA2Q96DR5 249 aa17.23■□□□□ 0.35
DDX55-207ENST00000540763 C12orf49Q9H741 205 aa17.23■□□□□ 0.35
DDX55-207ENST00000540763 KRCC1Q9NPI7 259 aaPredicted RBP17.23■□□□□ 0.35
DDX55-207ENST00000540763 C20orf141Q9NUB4 165 aa17.23■□□□□ 0.35
DDX55-207ENST00000540763 GALNT8Q9NY28 637 aa17.23■□□□□ 0.35
DDX55-207ENST00000540763 SEC14L4Q9UDX3 406 aa17.23■□□□□ 0.35
DDX55-207ENST00000540763 RCE1Q9Y256 329 aa17.23■□□□□ 0.35
DDX55-207ENST00000540763 NOX1Q9Y5S8 564 aa17.23■□□□□ 0.35
DDX55-207ENST00000540763 LRRN3E7EW58 273 aa17.22■□□□□ 0.35
DDX55-207ENST00000540763 MS4A18H0YCH9 400 aa17.22■□□□□ 0.35
DDX55-207ENST00000540763 AKAP8O43823 692 aaKnown RBP17.22■□□□□ 0.35
DDX55-207ENST00000540763 MRPL33O75394 65 aaKnown RBP17.22■□□□□ 0.35
DDX55-207ENST00000540763 DIRAS1O95057 198 aa17.22■□□□□ 0.35
DDX55-207ENST00000540763 HIST1H2ABP04908 130 aa17.22■□□□□ 0.35
DDX55-207ENST00000540763 IFI30P13284 250 aa17.22■□□□□ 0.35
DDX55-207ENST00000540763 FUT4P22083 530 aa17.22■□□□□ 0.35
DDX55-207ENST00000540763 CBLP22681 906 aa17.22■□□□□ 0.35
DDX55-207ENST00000540763 GRNP28799 593 aaKnown RBP17.22■□□□□ 0.35
DDX55-207ENST00000540763 RRM2P31350 389 aa17.22■□□□□ 0.35
DDX55-207ENST00000540763 CD79BP40259 229 aa17.22■□□□□ 0.35
DDX55-207ENST00000540763 SLC9A3P48764 834 aa17.22■□□□□ 0.35
DDX55-207ENST00000540763 GABPB1Q06547 395 aaPredicted RBP17.22■□□□□ 0.35
DDX55-207ENST00000540763 MS4A18Q3C1V0 323 aa17.22■□□□□ 0.35
DDX55-207ENST00000540763 FGD3Q5JSP0 725 aa17.22■□□□□ 0.35
DDX55-207ENST00000540763 PODNL1Q6PEZ8 512 aa17.22■□□□□ 0.35
DDX55-207ENST00000540763 HIST3H2AQ7L7L0 130 aa17.22■□□□□ 0.35
DDX55-207ENST00000540763 NANOGNBQ7Z5D8 188 aa17.22■□□□□ 0.35
DDX55-207ENST00000540763 PXKQ7Z7A4 578 aa17.22■□□□□ 0.35
DDX55-207ENST00000540763 NRMQ8IXM6 262 aa17.22■□□□□ 0.35
DDX55-207ENST00000540763 CDK20Q8IZL9 346 aa17.22■□□□□ 0.35
DDX55-207ENST00000540763 ZIC4Q8N9L1 334 aa17.22■□□□□ 0.35
DDX55-207ENST00000540763 HIST1H2ACQ93077 130 aa17.22■□□□□ 0.35
DDX55-207ENST00000540763 APH1AQ96BI3 265 aa17.22■□□□□ 0.35
DDX55-207ENST00000540763 SPOCK3Q9BQ16 436 aa17.22■□□□□ 0.35
DDX55-207ENST00000540763 TESMINQ9Y4I5 508 aa17.22■□□□□ 0.35
DDX55-207ENST00000540763 OR6C65A6NJZ3 312 aa17.21■□□□□ 0.35
DDX55-207ENST00000540763 C19orf84I3L1E1 186 aa17.21■□□□□ 0.35
DDX55-207ENST00000540763 TRAF3IP2O43734 574 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms