RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 GHDCQ8N2G8 530 aa16.3■□□□□ 0.2
GNE-204ENST00000539208 LSM14AQ8ND56 463 aaKnown RBP16.3■□□□□ 0.2
GNE-204ENST00000539208 HAVCR2Q8TDQ0 301 aa16.3■□□□□ 0.2
GNE-204ENST00000539208 RNF31Q96EP0 1072 aa16.3■□□□□ 0.2
GNE-204ENST00000539208 RTN4RQ9BZR6 473 aa16.3■□□□□ 0.2
GNE-204ENST00000539208 RPRD1BQ9NQG5 326 aaKnown RBP16.3■□□□□ 0.2
GNE-204ENST00000539208 COPS7AQ9UBW8 275 aa16.3■□□□□ 0.2
GNE-204ENST00000539208 N6AMT1Q9Y5N5 214 aa16.3■□□□□ 0.2
GNE-204ENST00000539208 FAM240BA0A1B0GVZ2 78 aa16.3■□□□□ 0.2
GNE-204ENST00000539208 CDC40O60508 579 aaKnown RBP eCLIP16.3■□□□□ 0.2
GNE-204ENST00000539208 FZD7O75084 574 aa16.3■□□□□ 0.2
GNE-204ENST00000539208 EPXP11678 715 aa16.3■□□□□ 0.2
GNE-204ENST00000539208 RPL18Q07020 188 aaKnown RBP16.3■□□□□ 0.2
GNE-204ENST00000539208 CCDC85BQ15834 202 aaPredicted RBP16.3■□□□□ 0.2
GNE-204ENST00000539208 TBRG1Q3YBR2 411 aa16.3■□□□□ 0.2
GNE-204ENST00000539208 GPR139Q6DWJ6 353 aa16.3■□□□□ 0.2
GNE-204ENST00000539208 PYHIN1Q6K0P9 492 aa16.3■□□□□ 0.2
GNE-204ENST00000539208 ZNF441Q8N8Z8 693 aa16.3■□□□□ 0.2
GNE-204ENST00000539208 TAAR8Q969N4 342 aa16.3■□□□□ 0.2
GNE-204ENST00000539208 ZNF501Q96CX3 271 aaPredicted RBP16.3■□□□□ 0.2
GNE-204ENST00000539208 SNX18Q96RF0 628 aa16.3■□□□□ 0.2
GNE-204ENST00000539208 DPYSL5Q9BPU6 564 aa16.3■□□□□ 0.2
GNE-204ENST00000539208 MARVELD1Q9BSK0 173 aa16.3■□□□□ 0.2
GNE-204ENST00000539208 THAP7Q9BT49 309 aaPredicted RBP16.3■□□□□ 0.2
GNE-204ENST00000539208 WACQ9BTA9 647 aa16.3■□□□□ 0.2
GNE-204ENST00000539208 DUSP15Q9H1R2 295 aaPredicted RBP16.3■□□□□ 0.2
GNE-204ENST00000539208 GRHPRQ9UBQ7 328 aa16.3■□□□□ 0.2
GNE-204ENST00000539208 ZNF879B4DU55 563 aa16.29■□□□□ 0.2
GNE-204ENST00000539208 HCRTR2O43614 444 aa16.29■□□□□ 0.2
GNE-204ENST00000539208 CPNE3O75131 537 aaKnown RBP16.29■□□□□ 0.2
GNE-204ENST00000539208 HIST1H2ABP04908 130 aa16.29■□□□□ 0.2
GNE-204ENST00000539208 PSKH1P11801 424 aa16.29■□□□□ 0.2
GNE-204ENST00000539208 NR0B1P51843 470 aaKnown RBP16.29■□□□□ 0.2
GNE-204ENST00000539208 NKX2-5P52952 324 aaPredicted RBP16.29■□□□□ 0.2
GNE-204ENST00000539208 CLDN20P56880 219 aa16.29■□□□□ 0.2
GNE-204ENST00000539208 WDR45BQ5MNZ6 344 aa16.29■□□□□ 0.2
GNE-204ENST00000539208 ARHGAP40Q5TG30 622 aa16.29■□□□□ 0.2
GNE-204ENST00000539208 HIST3H2AQ7L7L0 130 aa16.29■□□□□ 0.2
GNE-204ENST00000539208 SLC29A4Q7RTT9 530 aa16.29■□□□□ 0.2
GNE-204ENST00000539208 NANOGNBQ7Z5D8 188 aa16.29■□□□□ 0.2
GNE-204ENST00000539208 Q8N9G6 341 aaPredicted RBP16.29■□□□□ 0.2
GNE-204ENST00000539208 PLPP5Q8NEB5 264 aa16.29■□□□□ 0.2
GNE-204ENST00000539208 HIST1H2ACQ93077 130 aa16.29■□□□□ 0.2
GNE-204ENST00000539208 TRIM63Q969Q1 353 aa16.29■□□□□ 0.2
GNE-204ENST00000539208 RFT1Q96AA3 541 aa16.29■□□□□ 0.2
GNE-204ENST00000539208 CLDN23Q96B33 292 aa16.29■□□□□ 0.2
GNE-204ENST00000539208 CMTM3Q96MX0 182 aa16.29■□□□□ 0.2
GNE-204ENST00000539208 KLHDC3Q9BQ90 382 aa16.29■□□□□ 0.2
GNE-204ENST00000539208 OR2B2Q9GZK3 357 aa16.29■□□□□ 0.2
GNE-204ENST00000539208 VN1R1Q9GZP7 353 aa16.29■□□□□ 0.2
GNE-204ENST00000539208 PRO3102Q9H379 93 aa16.29■□□□□ 0.2
GNE-204ENST00000539208 CCDC86Q9H6F5 360 aaKnown RBP16.29■□□□□ 0.2
GNE-204ENST00000539208 NDUFB5O43674 189 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 TMEM127O75204 238 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 TRIM3O75382 744 aaPredicted RBP16.28■□□□□ 0.2
GNE-204ENST00000539208 PAHP00439 452 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 TACSTD2P09758 323 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 CXCR1P25024 350 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 PLCXD2Q0VAA5 305 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 MRPL28Q13084 256 aaKnown RBP16.28■□□□□ 0.2
GNE-204ENST00000539208 MARCH3Q86UD3 253 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 RNF166Q96A37 237 aaPredicted RBP16.28■□□□□ 0.2
GNE-204ENST00000539208 NRSN2Q9GZP1 204 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 ZNF768Q9H5H4 540 aaKnown RBP16.28■□□□□ 0.2
GNE-204ENST00000539208 ZNF281Q9Y2X9 895 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 TP53BP1Q12888 1972 aaPredicted RBP16.28■□□□□ 0.2
GNE-204ENST00000539208 A0A1B0GTQ1 180 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 A8MU76 341 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 SLC43A1O75387 559 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 BGLAPP02818 100 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 F13BP05160 661 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 ATF1P18846 271 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 PGCP20142 388 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 ZFP69Q49AA0 526 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 HSD17B12Q53GQ0 312 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 YIF1BQ5BJH7 314 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 ZNF57Q68EA5 555 aaPredicted RBP16.28■□□□□ 0.2
GNE-204ENST00000539208 LYPD4Q6UWN0 246 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 TIGD4Q8IY51 512 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 SIX5Q8N196 739 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 OR2T4Q8NH00 348 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 OMA1Q96E52 524 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 TSPAN32Q96QS1 320 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 OR14A2Q96R54 314 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 MNTQ99583 582 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 PDCD1LG2Q9BQ51 273 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 HDHD2Q9H0R4 259 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 FGF21Q9NSA1 209 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 NLKQ9UBE8 527 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 MKL2Q9ULH7 1088 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 SPAG17Q6Q759 2223 aa16.28■□□□□ 0.2
GNE-204ENST00000539208 TRAV36DV7A0A075B6V5 113 aa16.27■□□□□ 0.2
GNE-204ENST00000539208 CDC14CA4D256 554 aa16.27■□□□□ 0.2
GNE-204ENST00000539208 TOX3O15405 576 aaPredicted RBP16.27■□□□□ 0.2
GNE-204ENST00000539208 AHCYP23526 432 aa16.27■□□□□ 0.2
GNE-204ENST00000539208 ABCD3P28288 659 aa16.27■□□□□ 0.2
GNE-204ENST00000539208 PSMB10P40306 273 aa16.27■□□□□ 0.2
GNE-204ENST00000539208 TATDN3Q17R31 274 aa16.27■□□□□ 0.2
GNE-204ENST00000539208 MESTQ5EB52 335 aa16.27■□□□□ 0.2
GNE-204ENST00000539208 ZNF511Q8NB15 262 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms