RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 GOLGA6L1Q8N7Z2 621 aa9.53□□□□□ -0.88
RNF4-212ENST00000509258 OR10H5Q8NGA6 315 aa9.53□□□□□ -0.88
RNF4-212ENST00000509258 BBS10Q8TAM1 723 aa9.53□□□□□ -0.88
RNF4-212ENST00000509258 CKAP2Q8WWK9 683 aa9.53□□□□□ -0.88
RNF4-212ENST00000509258 ALKBH3Q96Q83 286 aaPredicted RBP9.53□□□□□ -0.88
RNF4-212ENST00000509258 TNFRSF13CQ96RJ3 184 aa9.53□□□□□ -0.88
RNF4-212ENST00000509258 KCNS3Q9BQ31 491 aa9.53□□□□□ -0.88
RNF4-212ENST00000509258 TMEM160Q9NX00 188 aa9.53□□□□□ -0.88
RNF4-212ENST00000509258 LPAR3Q9UBY5 353 aa9.53□□□□□ -0.88
RNF4-212ENST00000509258 DCTN4Q9UJW0 460 aa9.53□□□□□ -0.88
RNF4-212ENST00000509258 FKBP7Q9Y680 259 aa9.53□□□□□ -0.88
RNF4-212ENST00000509258 GMEB1Q9Y692 573 aa9.53□□□□□ -0.88
RNF4-212ENST00000509258 SVEP1Q4LDE5 3571 aa9.52□□□□□ -0.89
RNF4-212ENST00000509258 A0A1B0GWA3 101 aa9.52□□□□□ -0.89
RNF4-212ENST00000509258 ZNF503-AS2A6NEH8 195 aa9.52□□□□□ -0.89
RNF4-212ENST00000509258 ELOA3DA6NLF2 546 aaPredicted RBP9.52□□□□□ -0.89
RNF4-212ENST00000509258 H7C417 338 aa9.52□□□□□ -0.89
RNF4-212ENST00000509258 GPRIN2O60269 458 aa9.52□□□□□ -0.89
RNF4-212ENST00000509258 HPRP00739 348 aa9.52□□□□□ -0.89
RNF4-212ENST00000509258 F12P00748 615 aaPredicted RBP9.52□□□□□ -0.89
RNF4-212ENST00000509258 H2AFXP16104 143 aaPredicted RBP9.52□□□□□ -0.89
RNF4-212ENST00000509258 GPX2P18283 190 aa9.52□□□□□ -0.89
RNF4-212ENST00000509258 CDH2P19022 906 aaPredicted RBP9.52□□□□□ -0.89
RNF4-212ENST00000509258 NCF2P19878 526 aaPredicted RBP9.52□□□□□ -0.89
RNF4-212ENST00000509258 CBLP22681 906 aa9.52□□□□□ -0.89
RNF4-212ENST00000509258 ATP4BP51164 291 aa9.52□□□□□ -0.89
RNF4-212ENST00000509258 PRPS1P60891 318 aa9.52□□□□□ -0.89
RNF4-212ENST00000509258 STX1BP61266 288 aa9.52□□□□□ -0.89
RNF4-212ENST00000509258 CDK6Q00534 326 aa9.52□□□□□ -0.89
RNF4-212ENST00000509258 ZSWIM7Q19AV6 140 aa9.52□□□□□ -0.89
RNF4-212ENST00000509258 ELOA3BQ3SY89 546 aa9.52□□□□□ -0.89
RNF4-212ENST00000509258 PHYHD1Q5SRE7 291 aa9.52□□□□□ -0.89
RNF4-212ENST00000509258 PRAMEF8Q5VWM4 474 aa9.52□□□□□ -0.89
RNF4-212ENST00000509258 PRAMEF7Q5VXH5 474 aa9.52□□□□□ -0.89
RNF4-212ENST00000509258 C6orf89Q6UWU4 347 aa9.52□□□□□ -0.89
RNF4-212ENST00000509258 AAED1Q7RTV5 226 aa9.52□□□□□ -0.89
RNF4-212ENST00000509258 POMGNT2Q8NAT1 580 aa9.52□□□□□ -0.89
RNF4-212ENST00000509258 ELOA3Q8NG57 546 aa9.52□□□□□ -0.89
RNF4-212ENST00000509258 GPR32P1Q8NGA4 272 aa9.52□□□□□ -0.89
RNF4-212ENST00000509258 OR4D11Q8NGI4 311 aa9.52□□□□□ -0.89
RNF4-212ENST00000509258 FAM168AQ92567 244 aa9.52□□□□□ -0.89
RNF4-212ENST00000509258 PROX1Q92786 737 aa9.52□□□□□ -0.89
RNF4-212ENST00000509258 TAAR8Q969N4 342 aa9.52□□□□□ -0.89
RNF4-212ENST00000509258 SLC25A36Q96CQ1 311 aa9.52□□□□□ -0.89
RNF4-212ENST00000509258 ZNF837Q96EG3 531 aaPredicted RBP9.52□□□□□ -0.89
RNF4-212ENST00000509258 TAPBPLQ9BX59 468 aa9.52□□□□□ -0.89
RNF4-212ENST00000509258 PIF1Q9H611 641 aa9.52□□□□□ -0.89
RNF4-212ENST00000509258 MOV10Q9HCE1 1003 aaKnown RBP9.52□□□□□ -0.89
RNF4-212ENST00000509258 OBP2BQ9NPH6 170 aa9.52□□□□□ -0.89
RNF4-212ENST00000509258 ATP23Q9Y6H3 246 aa9.52□□□□□ -0.89
RNF4-212ENST00000509258 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.51□□□□□ -0.892e-7■■■■■ 29.5
RNF4-212ENST00000509258 TMEM247A6NEH6 219 aa9.51□□□□□ -0.89
RNF4-212ENST00000509258 OR6C65A6NJZ3 312 aa9.51□□□□□ -0.89
RNF4-212ENST00000509258 LRRN3E7EW58 273 aa9.51□□□□□ -0.89
RNF4-212ENST00000509258 ATP6V1G2-DDX39BF2Z307 99 aa9.51□□□□□ -0.89
RNF4-212ENST00000509258 M0R3H8 397 aa9.51□□□□□ -0.89
RNF4-212ENST00000509258 KRT33AO76009 404 aa9.51□□□□□ -0.89
RNF4-212ENST00000509258 LY6HO94772 140 aa9.51□□□□□ -0.89
RNF4-212ENST00000509258 ZNF432O94892 652 aa9.51□□□□□ -0.89
RNF4-212ENST00000509258 LYPD3O95274 346 aa9.51□□□□□ -0.89
RNF4-212ENST00000509258 ETS2P15036 469 aa9.51□□□□□ -0.89
RNF4-212ENST00000509258 MPGP29372 298 aa9.51□□□□□ -0.89
RNF4-212ENST00000509258 PRKAR1BP31321 381 aa9.51□□□□□ -0.89
RNF4-212ENST00000509258 APOBEC3AP31941 199 aaPredicted RBP9.51□□□□□ -0.89
RNF4-212ENST00000509258 CRYBA2P53672 197 aa9.51□□□□□ -0.89
RNF4-212ENST00000509258 MTPNP58546 118 aa9.51□□□□□ -0.89
RNF4-212ENST00000509258 COPZ1P61923 177 aa9.51□□□□□ -0.89
RNF4-212ENST00000509258 SCARB2Q14108 478 aa9.51□□□□□ -0.89
RNF4-212ENST00000509258 SQLEQ14534 574 aa9.51□□□□□ -0.89
RNF4-212ENST00000509258 NPTX1Q15818 432 aa9.51□□□□□ -0.89
RNF4-212ENST00000509258 RUNDC3AQ59EK9 446 aa9.51□□□□□ -0.89
RNF4-212ENST00000509258 DHRS4L2Q6PKH6 230 aa9.51□□□□□ -0.89
RNF4-212ENST00000509258 NHLRC1Q6VVB1 395 aa9.51□□□□□ -0.89
RNF4-212ENST00000509258 WDR88Q6ZMY6 472 aa9.51□□□□□ -0.89
RNF4-212ENST00000509258 ZNF525Q8N782 197 aa9.51□□□□□ -0.89
RNF4-212ENST00000509258 SMYD1Q8NB12 490 aa9.51□□□□□ -0.89
RNF4-212ENST00000509258 MFSD8Q8NHS3 518 aa9.51□□□□□ -0.89
RNF4-212ENST00000509258 STK35Q8TDR2 534 aa9.51□□□□□ -0.89
RNF4-212ENST00000509258 KCNK17Q96T54 332 aa9.51□□□□□ -0.89
RNF4-212ENST00000509258 SF3B5Q9BWJ5 86 aaKnown RBP9.51□□□□□ -0.89
RNF4-212ENST00000509258 BEX2Q9BXY8 128 aa9.51□□□□□ -0.89
RNF4-212ENST00000509258 ARMC7Q9H6L4 198 aa9.51□□□□□ -0.89
RNF4-212ENST00000509258 INTS9Q9NV88 658 aaKnown RBP9.51□□□□□ -0.89
RNF4-212ENST00000509258 FBXO9Q9UK97 447 aaPredicted RBP9.51□□□□□ -0.89
RNF4-212ENST00000509258 ZNF232Q9UNY5 417 aa9.51□□□□□ -0.89
RNF4-212ENST00000509258 IFT52Q9Y366 437 aa9.51□□□□□ -0.89
RNF4-212ENST00000509258 A0A096LPE4 126 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 IGHV1-18A0A0C4DH31 117 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 A0A1W2PPZ6 126 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 VSTM5A8MXK1 200 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 M0R082 166 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 FBP2O00757 339 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 TRAF3IP2O43734 574 aaPredicted RBP9.5□□□□□ -0.89
RNF4-212ENST00000509258 VAMP5O95183 116 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 AHSA1O95433 338 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 OPN1SWP03999 348 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 THY1P04216 161 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 CELA3BP08861 270 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 HLA-DOBP13765 273 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 GRPRP30550 384 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms