RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 CENPHQ9H3R5 247 aa3.14□□□□□ -1.91
UBE2D3-226ENST00000508635 EXO5Q9H790 373 aa3.14□□□□□ -1.91
UBE2D3-226ENST00000508635 LRTM1Q9HBL6 345 aa3.14□□□□□ -1.91
UBE2D3-226ENST00000508635 ACKR4Q9NPB9 350 aa3.14□□□□□ -1.91
UBE2D3-226ENST00000508635 SLC35C2Q9NQQ7 365 aa3.14□□□□□ -1.91
UBE2D3-226ENST00000508635 ARGLU1Q9NWB6 273 aaPredicted RBP3.14□□□□□ -1.91
UBE2D3-226ENST00000508635 C1orf109Q9NX04 203 aa3.14□□□□□ -1.91
UBE2D3-226ENST00000508635 QPCTLQ9NXS2 382 aa3.14□□□□□ -1.91
UBE2D3-226ENST00000508635 CISD1Q9NZ45 108 aaKnown RBP3.14□□□□□ -1.91
UBE2D3-226ENST00000508635 MAT2BQ9NZL9 334 aa3.14□□□□□ -1.91
UBE2D3-226ENST00000508635 SPRR3Q9UBC9 169 aa3.14□□□□□ -1.91
UBE2D3-226ENST00000508635 B4GALT7Q9UBV7 327 aa3.14□□□□□ -1.91
UBE2D3-226ENST00000508635 SLC13A4Q9UKG4 626 aa3.14□□□□□ -1.91
UBE2D3-226ENST00000508635 ACAD8Q9UKU7 415 aa3.14□□□□□ -1.91
UBE2D3-226ENST00000508635 BOKQ9UMX3 212 aaPredicted RBP3.14□□□□□ -1.91
UBE2D3-226ENST00000508635 CARD8Q9Y2G2 431 aa3.14□□□□□ -1.91
UBE2D3-226ENST00000508635 DLGAP4Q9Y2H0 992 aa3.14□□□□□ -1.91
UBE2D3-226ENST00000508635 TMED5Q9Y3A6 229 aa3.14□□□□□ -1.91
UBE2D3-226ENST00000508635 FAM96BQ9Y3D0 163 aa3.14□□□□□ -1.91
UBE2D3-226ENST00000508635 PAM16Q9Y3D7 125 aa3.14□□□□□ -1.91
UBE2D3-226ENST00000508635 A3GALT2U3KPV4 340 aa3.14□□□□□ -1.91
UBE2D3-226ENST00000508635 ITPR2Q14571 2701 aa3.14□□□□□ -1.91
UBE2D3-226ENST00000508635 ICE1Q9Y2F5 2266 aa3.14□□□□□ -1.91
UBE2D3-226ENST00000508635 EXPH5Q8NEV8 1989 aa3.14□□□□□ -1.91
UBE2D3-226ENST00000508635 MAP1AP78559 2803 aaPredicted RBP3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 MED12Q93074 2177 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 C15orf38-AP3S2A0A0A6YYH1 394 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 FRG2CA6NGY1 282 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 MYO1GB0I1T2 1018 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 SLCO1B7G3V0H7 640 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 PLOD2O00469 737 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 ANKRD28O15084 1053 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 TO15178 435 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 HDAC3O15379 428 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 PCDH7O60245 1069 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 PLOD3O60568 738 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 UGT2B11O75310 529 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 SEC22BO75396 215 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 CRCPO75575 148 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 LYPLA1O75608 230 aaPredicted RBP3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 TRAPPC6AO75865 159 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 BCAS2O75934 225 aaPredicted RBP3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 TGDSO95455 350 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 EPPINO95925 133 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 CH25HO95992 272 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 HEXAP06865 529 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 IL3P08700 152 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 HOXD4P09016 255 aaPredicted RBP3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 IFI6P09912 130 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 CT45A8P0DMV1 189 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 CT45A9P0DMV2 189 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 PRPS2P11908 318 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 NEFHP12036 1026 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 BCKDHAP12694 445 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 GABRA1P14867 456 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 ZNF12P17014 697 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 SDC1P18827 310 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 CAPN3P20807 821 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 ELAVL4P26378 380 aaKnown RBP3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 GDF1P27539 372 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 PTPN6P29350 595 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 TIA1P31483 386 aaKnown RBP eCLIP3.13□□□□□ -1.913e-7■□□□□ 10
UBE2D3-226ENST00000508635 MPIP34949 423 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 PTGDSP41222 190 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 MAP3K8P41279 467 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 PPICP45877 212 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 ZFP36L2P47974 494 aaKnown RBP3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 TRPC1P48995 793 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 TMED10P49755 219 aaKnown RBP3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 EMDP50402 254 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 CDK9P50750 372 aaKnown RBP3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 CLDN8P56748 225 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 DSCR9P59020 149 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 DCAF7P61962 342 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 RPP38P78345 283 aaKnown RBP3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 TLE4Q04727 773 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 EGR4Q05215 589 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 ZNF763Q0D2J5 394 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 C2orf80Q0P641 193 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 SNTA1Q13424 505 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 PDE7AQ13946 482 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 HEPACAMQ14CZ8 416 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 EXOSC7Q15024 291 aaKnown RBP3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 LTB4RQ15722 352 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 NNATQ16517 81 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 CT45A2Q5DJT8 189 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 NHSL2Q5HYW2 709 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 C1orf185Q5T7R7 199 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 WLSQ5T9L3 541 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 RIPPLY2Q5TAB7 128 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 C6orf163Q5TEZ5 329 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 HHATQ5VTY9 493 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 TMEM198Q66K66 360 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 TIGD3Q6B0B8 471 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 SLC30A6Q6NXT4 461 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 EPGNQ6UW88 154 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 B3GNT6Q6ZMB0 384 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 MEX3BQ6ZN04 569 aaKnown RBP3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 IKBIPQ70UQ0 350 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 H1FNTQ75WM6 255 aaPredicted RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms