RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 TPD52L1Q16890 204 aaPredicted RBP3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 TMEM44Q2T9K0 475 aa3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 ANKRD55Q3KP44 614 aa3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 ZNF311Q5JNZ3 666 aa3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 SEL1L2Q5TEA6 688 aa3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 SLX4IPQ5VYV7 408 aa3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 FAM219BQ5XKK7 198 aa3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 NCR3LG1Q68D85 454 aa3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 NIPAL3Q6P499 406 aa3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 LRRC8BQ6P9F7 803 aa3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 BLOC1S2Q6QNY1 142 aa3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 REG3GQ6UW15 175 aa3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 ATRAIDQ6UW56 229 aa3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 ZNF841Q6ZN19 808 aa3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 Q6ZTC4 211 aa3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 BHLHA9Q7RTU4 235 aa3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 NET1Q7Z628 596 aaPredicted RBP3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 CBWD2Q8IUF1 395 aa3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 FADS6Q8N9I5 356 aa3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 WDSUB1Q8N9V3 476 aa3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 DNAAF3Q8N9W5 541 aa3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 SPPL2BQ8TCT7 592 aa3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 CA5BP1Q8WTZ4 195 aa3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 DLX4Q92988 240 aaPredicted RBP3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 DHTKD1Q96HY7 919 aaPredicted RBP3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 C4orf36Q96KX1 117 aa3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 TRIM51Q9BSJ1 452 aa3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 CCDC28BQ9BUN5 200 aa3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 ST6GALNAC5Q9BVH7 336 aa3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 BBS2Q9BXC9 721 aa3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 JPT2Q9H910 190 aa3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 TBK1Q9UHD2 729 aa3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 LYSTQ99698 3801 aa3.89□□□□□ -1.79
SSX2IP-208ENST00000490476 SCN1AP35498 2009 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 FRAS1Q86XX4 4008 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 NPIPA5A0A0B4J1W7 369 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 A0A1B0GTH9 108 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 LRRC30A6NM36 301 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 WASHC1A8K0Z3 465 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 NPIPA5E9PKD4 350 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 PRAMEF26H0Y7S4 382 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 H7C423 109 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 GMFGO60234 142 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 SURF6O75683 361 aaKnown RBP3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 NUDT14O95848 222 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 IGHG1P01857 330 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 CISD3P0C7P0 127 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 UQCRBP14927 111 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 DRD5P21918 477 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 CASP14P31944 242 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 TDGF1P3P51864 188 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 MFAP2P55001 183 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 OSTNP61366 133 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 CD226Q15762 336 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 CNPY1Q3B7I2 92 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 C14orf177Q52M58 125 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 CEP55Q53EZ4 464 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 GFI1BQ5VTD9 330 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 SDHAF4Q5VUM1 108 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 TAF3Q5VWG9 929 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 EMBQ6PCB8 327 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 CES3Q6UWW8 571 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 Q6ZS92 163 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 CENPUQ71F23 418 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 SLC47A2Q86VL8 602 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 BBS7Q8IWZ6 715 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 TBC1D21Q8IYX1 336 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 SLC22A18ASQ8N1D0 253 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 ZNF491Q8N8L2 437 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 Q8N9G6 341 aaPredicted RBP3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 NFAM1Q8NET5 270 aaPredicted RBP3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 OR4Q3Q8NH05 313 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 C2orf15Q8WU43 125 aaKnown RBP3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 ATF6BQ99941 703 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 FAM173AQ9BQD7 235 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 MRPL13Q9BYD1 178 aaKnown RBP3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 RAB33BQ9H082 229 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 NEUROG2Q9H2A3 272 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 CALHM2Q9HA72 323 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 LPAR2Q9HBW0 351 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 RBM28Q9NW13 759 aaKnown RBP3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 MBD2Q9UBB5 411 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 SCML1Q9UN30 329 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 MOB4Q9Y3A3 225 aa3.88□□□□□ -1.79
SSX2IP-208ENST00000490476 MED12Q93074 2177 aa3.87□□□□□ -1.79
SSX2IP-208ENST00000490476 DSCAMO60469 2012 aa3.87□□□□□ -1.79
SSX2IP-208ENST00000490476 CSMD3Q7Z407 3707 aa3.87□□□□□ -1.79
SSX2IP-208ENST00000490476 SMIM28A0A1B0GU29 152 aa3.87□□□□□ -1.79
SSX2IP-208ENST00000490476 MFSD2BA6NFX1 497 aa3.87□□□□□ -1.79
SSX2IP-208ENST00000490476 IDSB3KWA1 339 aa3.87□□□□□ -1.79
SSX2IP-208ENST00000490476 NPIPA2E9PIF3 369 aa3.87□□□□□ -1.79
SSX2IP-208ENST00000490476 C11orf98E9PRG8 122 aa3.87□□□□□ -1.79
SSX2IP-208ENST00000490476 MCF2LO15068 1137 aa3.87□□□□□ -1.79
SSX2IP-208ENST00000490476 MFN2O95140 757 aa3.87□□□□□ -1.79
SSX2IP-208ENST00000490476 HOXD4P09016 255 aaPredicted RBP3.87□□□□□ -1.79
SSX2IP-208ENST00000490476 CLUP10909 449 aa3.87□□□□□ -1.79
SSX2IP-208ENST00000490476 ANXA3P12429 323 aa3.87□□□□□ -1.79
SSX2IP-208ENST00000490476 IDSP22304 550 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms