RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 ZNF229Q9UJW7 825 aa11.8□□□□□ -0.52
HDAC1-208ENST00000482310 TMEM5Q9Y2B1 443 aa11.8□□□□□ -0.52
HDAC1-208ENST00000482310 ZNF175Q9Y473 711 aa11.8□□□□□ -0.52
HDAC1-208ENST00000482310 CACNA1CQ13936 2221 aa11.8□□□□□ -0.52
HDAC1-208ENST00000482310 A0A0G2JNJ9 132 aa11.79□□□□□ -0.52
HDAC1-208ENST00000482310 A0A1B0GUH1 482 aa11.79□□□□□ -0.52
HDAC1-208ENST00000482310 MBD3L4A6NDZ8 208 aaPredicted RBP11.79□□□□□ -0.52
HDAC1-208ENST00000482310 MBD3L3A6NE82 208 aaPredicted RBP11.79□□□□□ -0.52
HDAC1-208ENST00000482310 UNC119BA6NIH7 251 aa11.79□□□□□ -0.52
HDAC1-208ENST00000482310 MBD3L5A6NJ08 208 aaPredicted RBP11.79□□□□□ -0.52
HDAC1-208ENST00000482310 RNF13O43567 381 aa11.79□□□□□ -0.52
HDAC1-208ENST00000482310 CYTIPO60759 359 aa11.79□□□□□ -0.52
HDAC1-208ENST00000482310 MT-ATP6P00846 226 aa11.79□□□□□ -0.52
HDAC1-208ENST00000482310 HOXD4P09016 255 aaPredicted RBP11.79□□□□□ -0.52
HDAC1-208ENST00000482310 AQP2P41181 271 aa11.79□□□□□ -0.52
HDAC1-208ENST00000482310 CTBP2P56545 445 aa11.79□□□□□ -0.52
HDAC1-208ENST00000482310 POU3F1Q03052 451 aaPredicted RBP11.79□□□□□ -0.52
HDAC1-208ENST00000482310 TOP3AQ13472 1001 aaPredicted RBP11.79□□□□□ -0.52
HDAC1-208ENST00000482310 MICAQ29983 383 aa11.79□□□□□ -0.52
HDAC1-208ENST00000482310 C4orf17Q53FE4 359 aa11.79□□□□□ -0.52
HDAC1-208ENST00000482310 EEF1A1P5Q5VTE0 462 aa11.79□□□□□ -0.52
HDAC1-208ENST00000482310 ABLIM2Q6H8Q1 611 aa11.79□□□□□ -0.52
HDAC1-208ENST00000482310 H1FNTQ75WM6 255 aaPredicted RBP11.79□□□□□ -0.52
HDAC1-208ENST00000482310 ZER1Q7Z7L7 766 aa11.79□□□□□ -0.52
HDAC1-208ENST00000482310 OAFQ86UD1 273 aa11.79□□□□□ -0.52
HDAC1-208ENST00000482310 TUSC5Q8IXB3 177 aa11.79□□□□□ -0.52
HDAC1-208ENST00000482310 C10orf67Q8IYJ2 551 aa11.79□□□□□ -0.52
HDAC1-208ENST00000482310 MOSPD2Q8NHP6 518 aa11.79□□□□□ -0.52
HDAC1-208ENST00000482310 MBD3L2Q8NHZ7 208 aaPredicted RBP11.79□□□□□ -0.52
HDAC1-208ENST00000482310 FANK1Q8TC84 345 aa11.79□□□□□ -0.52
HDAC1-208ENST00000482310 GNPDA2Q8TDQ7 276 aa11.79□□□□□ -0.52
HDAC1-208ENST00000482310 PSD2Q9BQI7 771 aa11.79□□□□□ -0.52
HDAC1-208ENST00000482310 BDH2Q9BUT1 245 aa11.79□□□□□ -0.52
HDAC1-208ENST00000482310 RNF122Q9H9V4 155 aa11.79□□□□□ -0.52
HDAC1-208ENST00000482310 MRPL39Q9NYK5 338 aaKnown RBP11.79□□□□□ -0.52
HDAC1-208ENST00000482310 Q9UFV3 132 aa11.79□□□□□ -0.52
HDAC1-208ENST00000482310 FLNCQ14315 2725 aa11.79□□□□□ -0.52
HDAC1-208ENST00000482310 PLPP3O14495 311 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 DNPH1O43598 174 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 SMNDC1O75940 238 aaKnown RBP eCLIP11.78□□□□□ -0.52
HDAC1-208ENST00000482310 SOX14O95416 240 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 GASTP01350 101 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 F13BP05160 661 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 ASAH2BP0C7U1 165 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 HLA-DOBP13765 273 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 BMP5P22003 454 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 IFNGR2P38484 337 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 P2RY4P51582 365 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 ARHGDIAP52565 204 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 H3F3AP84243 136 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 ADORA2A-AS1P86434 159 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 RPL18Q07020 188 aaKnown RBP11.78□□□□□ -0.52
HDAC1-208ENST00000482310 PUDPQ08623 228 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 C1DQ13901 141 aaKnown RBP11.78□□□□□ -0.52
HDAC1-208ENST00000482310 MELKQ14680 651 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 MFSD13AQ14CX5 517 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 TMEM201Q5SNT2 666 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 TMEM211Q6ICI0 200 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 VWA1Q6PCB0 445 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 STK32CQ86UX6 486 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 UEVLDQ8IX04 471 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 ATG16L2Q8NAA4 619 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 OR9K2Q8NGE7 335 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 OR6S1Q8NH40 331 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 OR5K1Q8NHB7 308 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 RND1Q92730 232 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 SDCCAG3Q96C92 435 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 CENPNQ96H22 339 aaPredicted RBP11.78□□□□□ -0.52
HDAC1-208ENST00000482310 TNFRSF13CQ96RJ3 184 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 FEVQ99581 238 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 NIPSNAP1Q9BPW8 284 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 KLHL9Q9P2J3 617 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 ERRFI1Q9UJM3 462 aaPredicted RBP11.78□□□□□ -0.52
HDAC1-208ENST00000482310 OAZ3Q9UMX2 235 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 CORINQ9Y5Q5 1042 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 ALPK2Q86TB3 2170 aa11.78□□□□□ -0.52
HDAC1-208ENST00000482310 HCFC1P51610 2035 aa11.77□□□□□ -0.52
HDAC1-208ENST00000482310 A0A1W2PNV4 684 aa11.77□□□□□ -0.53
HDAC1-208ENST00000482310 FAM90A27PA6NNH2 459 aa11.77□□□□□ -0.53
HDAC1-208ENST00000482310 ZNF716A6NP11 495 aa11.77□□□□□ -0.53
HDAC1-208ENST00000482310 G3V2T6 193 aa11.77□□□□□ -0.53
HDAC1-208ENST00000482310 MS4A18H0YCH9 400 aa11.77□□□□□ -0.53
HDAC1-208ENST00000482310 PDLIM1O00151 329 aa11.77□□□□□ -0.53
HDAC1-208ENST00000482310 ZG16O60844 167 aa11.77□□□□□ -0.53
HDAC1-208ENST00000482310 RCBTB2O95199 551 aa11.77□□□□□ -0.53
HDAC1-208ENST00000482310 IGFBP1P08833 259 aaPredicted RBP11.77□□□□□ -0.53
HDAC1-208ENST00000482310 ZNF43P17038 809 aa11.77□□□□□ -0.53
HDAC1-208ENST00000482310 AGTR1P30556 359 aa11.77□□□□□ -0.53
HDAC1-208ENST00000482310 TIMP3P35625 211 aa11.77□□□□□ -0.53
HDAC1-208ENST00000482310 RPL4P36578 427 aaKnown RBP11.77□□□□□ -0.53
HDAC1-208ENST00000482310 SLC9A3P48764 834 aa11.77□□□□□ -0.53
HDAC1-208ENST00000482310 HMGA2P52926 109 aa11.77□□□□□ -0.53
HDAC1-208ENST00000482310 CLDN17P56750 224 aa11.77□□□□□ -0.53
HDAC1-208ENST00000482310 RNPS1Q15287 305 aaKnown RBP11.77□□□□□ -0.53
HDAC1-208ENST00000482310 MS4A18Q3C1V0 323 aa11.77□□□□□ -0.53
HDAC1-208ENST00000482310 CARD17Q5XLA6 110 aa11.77□□□□□ -0.53
HDAC1-208ENST00000482310 GTF2IRD2BQ6EKJ0 949 aa11.77□□□□□ -0.53
HDAC1-208ENST00000482310 OR2A2Q6IF42 318 aa11.77□□□□□ -0.53
HDAC1-208ENST00000482310 SHQ1Q6PI26 577 aaKnown RBP11.77□□□□□ -0.53
HDAC1-208ENST00000482310 CASP12Q6UXS9 341 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms