RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 PDCD2Q16342 344 aaPredicted RBP13.84□□□□□ -0.19
DDX56-210ENST00000479440 SAXO2Q658L1 398 aa13.84□□□□□ -0.19
DDX56-210ENST00000479440 OR4F3Q6IEY1 312 aa13.84□□□□□ -0.19
DDX56-210ENST00000479440 MDP1Q86V88 176 aa13.84□□□□□ -0.19
DDX56-210ENST00000479440 ZNF440Q8IYI8 595 aa13.84□□□□□ -0.19
DDX56-210ENST00000479440 RIBC1Q8N443 379 aaPredicted RBP13.84□□□□□ -0.19
DDX56-210ENST00000479440 ZG16BQ96DA0 208 aa13.84□□□□□ -0.19
DDX56-210ENST00000479440 NTN4Q9HB63 628 aa13.84□□□□□ -0.19
DDX56-210ENST00000479440 DDX28Q9NUL7 540 aaKnown RBP13.84□□□□□ -0.19
DDX56-210ENST00000479440 PRDM4Q9UKN5 801 aa13.84□□□□□ -0.19
DDX56-210ENST00000479440 NOX1Q9Y5S8 564 aa13.84□□□□□ -0.19
DDX56-210ENST00000479440 AGAP5A6NIR3 686 aa13.83□□□□□ -0.2
DDX56-210ENST00000479440 A8MVM7 634 aa13.83□□□□□ -0.2
DDX56-210ENST00000479440 J3QLI3 93 aa13.83□□□□□ -0.2
DDX56-210ENST00000479440 G6PDP11413 515 aa13.83□□□□□ -0.2
DDX56-210ENST00000479440 NR4A1P22736 598 aa13.83□□□□□ -0.2
DDX56-210ENST00000479440 GTF2E2P29084 291 aaKnown RBP13.83□□□□□ -0.2
DDX56-210ENST00000479440 CHI3L1P36222 383 aaPredicted RBP13.83□□□□□ -0.2
DDX56-210ENST00000479440 CLDN8P56748 225 aa13.83□□□□□ -0.2
DDX56-210ENST00000479440 ACSM5Q6NUN0 579 aa13.83□□□□□ -0.2
DDX56-210ENST00000479440 TREML4Q6UXN2 200 aa13.83□□□□□ -0.2
DDX56-210ENST00000479440 C1orf229Q6ZS94 237 aaPredicted RBP13.83□□□□□ -0.2
DDX56-210ENST00000479440 CARM1Q86X55 608 aa13.83□□□□□ -0.2
DDX56-210ENST00000479440 EPHX4Q8IUS5 362 aa13.83□□□□□ -0.2
DDX56-210ENST00000479440 GSPT2Q8IYD1 628 aaKnown RBP13.83□□□□□ -0.2
DDX56-210ENST00000479440 GPR137CQ8N3F9 429 aa13.83□□□□□ -0.2
DDX56-210ENST00000479440 NOA1Q8NC60 698 aaKnown RBP13.83□□□□□ -0.2
DDX56-210ENST00000479440 NANPQ8TBE9 248 aa13.83□□□□□ -0.2
DDX56-210ENST00000479440 TUBGCP3Q96CW5 907 aa13.83□□□□□ -0.2
DDX56-210ENST00000479440 RAB39BQ96DA2 213 aa13.83□□□□□ -0.2
DDX56-210ENST00000479440 SYT3Q9BQG1 590 aa13.83□□□□□ -0.2
DDX56-210ENST00000479440 DPY30Q9C005 99 aa13.83□□□□□ -0.2
DDX56-210ENST00000479440 ZNF385DQ9H6B1 395 aa13.83□□□□□ -0.2
DDX56-210ENST00000479440 ZNF665Q9H7R5 613 aa13.83□□□□□ -0.2
DDX56-210ENST00000479440 ESM1Q9NQ30 184 aa13.83□□□□□ -0.2
DDX56-210ENST00000479440 NOP53Q9NZM5 478 aaKnown RBP13.83□□□□□ -0.2
DDX56-210ENST00000479440 A0A096LPI6 279 aa13.82□□□□□ -0.2
DDX56-210ENST00000479440 WNT9BO14905 357 aa13.82□□□□□ -0.2
DDX56-210ENST00000479440 AKAP8O43823 692 aaKnown RBP13.82□□□□□ -0.2
DDX56-210ENST00000479440 HKR1P10072 659 aa13.82□□□□□ -0.2
DDX56-210ENST00000479440 IL7RP16871 459 aa13.82□□□□□ -0.2
DDX56-210ENST00000479440 TCN1P20061 433 aaPredicted RBP13.82□□□□□ -0.2
DDX56-210ENST00000479440 COL8A2P25067 703 aa13.82□□□□□ -0.2
DDX56-210ENST00000479440 ALDH3B1P43353 468 aa13.82□□□□□ -0.2
DDX56-210ENST00000479440 ANXA11P50995 505 aaKnown RBP13.82□□□□□ -0.2
DDX56-210ENST00000479440 LMO4P61968 165 aa13.82□□□□□ -0.2
DDX56-210ENST00000479440 TRMT5Q32P41 509 aaKnown RBP13.82□□□□□ -0.2
DDX56-210ENST00000479440 MRPL2Q5T653 305 aaKnown RBP13.82□□□□□ -0.2
DDX56-210ENST00000479440 LSRQ86X29 649 aaPredicted RBP13.82□□□□□ -0.2
DDX56-210ENST00000479440 ZDHHC22Q8N966 263 aa13.82□□□□□ -0.2
DDX56-210ENST00000479440 VPS37AQ8NEZ2 397 aa13.82□□□□□ -0.2
DDX56-210ENST00000479440 OR8J2Q8NGG1 315 aa13.82□□□□□ -0.2
DDX56-210ENST00000479440 NEURL3Q96EH8 262 aa13.82□□□□□ -0.2
DDX56-210ENST00000479440 C3orf30Q96M34 536 aa13.82□□□□□ -0.2
DDX56-210ENST00000479440 TRNT1Q96Q11 434 aaKnown RBP13.82□□□□□ -0.2
DDX56-210ENST00000479440 TMPRSS13Q9BYE2 586 aa13.82□□□□□ -0.2
DDX56-210ENST00000479440 MARCOQ9UEW3 520 aaPredicted RBP13.82□□□□□ -0.2
DDX56-210ENST00000479440 CORINQ9Y5Q5 1042 aa13.82□□□□□ -0.2
DDX56-210ENST00000479440 ZNF503-AS2A6NEH8 195 aa13.81□□□□□ -0.2
DDX56-210ENST00000479440 ZNF99A8MXY4 864 aaPredicted RBP13.81□□□□□ -0.2
DDX56-210ENST00000479440 TMEM229AB2RXF0 380 aa13.81□□□□□ -0.2
DDX56-210ENST00000479440 ZNF432O94892 652 aa13.81□□□□□ -0.2
DDX56-210ENST00000479440 MPZL1O95297 269 aa13.81□□□□□ -0.2
DDX56-210ENST00000479440 AHSA1O95433 338 aa13.81□□□□□ -0.2
DDX56-210ENST00000479440 DBIP07108 87 aaKnown RBP13.81□□□□□ -0.2
DDX56-210ENST00000479440 TFPTP0C1Z6 253 aa13.81□□□□□ -0.2
DDX56-210ENST00000479440 ZNF43P17038 809 aa13.81□□□□□ -0.2
DDX56-210ENST00000479440 RPS4Y1P22090 263 aaKnown RBP13.81□□□□□ -0.2
DDX56-210ENST00000479440 GLRXP35754 106 aa13.81□□□□□ -0.2
DDX56-210ENST00000479440 CLDN17P56750 224 aa13.81□□□□□ -0.2
DDX56-210ENST00000479440 COPZ1P61923 177 aa13.81□□□□□ -0.2
DDX56-210ENST00000479440 TXNL4AP83876 142 aaKnown RBP13.81□□□□□ -0.2
DDX56-210ENST00000479440 GSG1Q2KHT4 349 aa13.81□□□□□ -0.2
DDX56-210ENST00000479440 CEACAM16Q2WEN9 425 aa13.81□□□□□ -0.2
DDX56-210ENST00000479440 MIDNQ504T8 468 aa13.81□□□□□ -0.2
DDX56-210ENST00000479440 GKAP1Q5VSY0 366 aaPredicted RBP13.81□□□□□ -0.2
DDX56-210ENST00000479440 ANXA8L1Q5VT79 327 aa13.81□□□□□ -0.2
DDX56-210ENST00000479440 C1orf140Q5VVS0 124 aa13.81□□□□□ -0.2
DDX56-210ENST00000479440 WBP2NLQ6ICG8 309 aa13.81□□□□□ -0.2
DDX56-210ENST00000479440 LRRC74BQ6ZQY2 392 aa13.81□□□□□ -0.2
DDX56-210ENST00000479440 ANKRD46Q86W74 232 aa13.81□□□□□ -0.2
DDX56-210ENST00000479440 CADM2Q8N3J6 435 aa13.81□□□□□ -0.2
DDX56-210ENST00000479440 MNS1Q8NEH6 495 aa13.81□□□□□ -0.2
DDX56-210ENST00000479440 MGARPQ8TDB4 240 aa13.81□□□□□ -0.2
DDX56-210ENST00000479440 ANP32BQ92688 251 aaKnown RBP13.81□□□□□ -0.2
DDX56-210ENST00000479440 YIPF5Q969M3 257 aa13.81□□□□□ -0.2
DDX56-210ENST00000479440 SLC35A5Q9BS91 424 aa13.81□□□□□ -0.2
DDX56-210ENST00000479440 SLC38A1Q9H2H9 487 aa13.81□□□□□ -0.2
DDX56-210ENST00000479440 GPR35Q9HC97 309 aa13.81□□□□□ -0.2
DDX56-210ENST00000479440 ASIC5Q9NY37 505 aa13.81□□□□□ -0.2
DDX56-210ENST00000479440 ZNF346Q9UL40 294 aaKnown RBP13.81□□□□□ -0.2
DDX56-210ENST00000479440 A0A1W2PPW3 197 aa13.8□□□□□ -0.2
DDX56-210ENST00000479440 HMGN4O00479 90 aa13.8□□□□□ -0.2
DDX56-210ENST00000479440 RP2O75695 350 aa13.8□□□□□ -0.2
DDX56-210ENST00000479440 CPSF4O95639 269 aaKnown RBP13.8□□□□□ -0.2
DDX56-210ENST00000479440 AVPP01185 164 aa13.8□□□□□ -0.2
DDX56-210ENST00000479440 KRT4P19013 534 aa13.8□□□□□ -0.2
DDX56-210ENST00000479440 GATA3P23771 443 aa13.8□□□□□ -0.2
DDX56-210ENST00000479440 FPR2P25090 351 aa13.8□□□□□ -0.2
DDX56-210ENST00000479440 SERPINB5P36952 375 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms