RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 GTF2E2P29084 291 aaKnown RBP18.06■□□□□ 0.48
CPNE1-219ENST00000440240 LGALS3BPQ08380 585 aa18.06■□□□□ 0.48
CPNE1-219ENST00000440240 GTDC1Q4AE62 458 aa18.06■□□□□ 0.48
CPNE1-219ENST00000440240 OR4F15Q8NGB8 312 aa18.06■□□□□ 0.48
CPNE1-219ENST00000440240 VPS33AQ96AX1 596 aa18.06■□□□□ 0.48
CPNE1-219ENST00000440240 VRK1Q99986 396 aaPredicted RBP18.06■□□□□ 0.48
CPNE1-219ENST00000440240 PIMREGQ9BSJ6 248 aa18.06■□□□□ 0.48
CPNE1-219ENST00000440240 SHARPINQ9H0F6 387 aa18.06■□□□□ 0.48
CPNE1-219ENST00000440240 A4GALTQ9NPC4 353 aa18.06■□□□□ 0.48
CPNE1-219ENST00000440240 NKIRAS1Q9NYS0 192 aa18.06■□□□□ 0.48
CPNE1-219ENST00000440240 RPS6KB2Q9UBS0 482 aa18.06■□□□□ 0.48
CPNE1-219ENST00000440240 RCE1Q9Y256 329 aa18.06■□□□□ 0.48
CPNE1-219ENST00000440240 PCDHB14Q9Y5E9 798 aa18.06■□□□□ 0.48
CPNE1-219ENST00000440240 YLPM1P49750 1951 aaKnown RBP18.05■□□□□ 0.48
CPNE1-219ENST00000440240 LOC390937A0A1W2PQ73 354 aa18.05■□□□□ 0.48
CPNE1-219ENST00000440240 VWC2LB2RUY7 222 aa18.05■□□□□ 0.48
CPNE1-219ENST00000440240 LMX1BO60663 402 aa18.05■□□□□ 0.48
CPNE1-219ENST00000440240 PNMTP11086 282 aa18.05■□□□□ 0.48
CPNE1-219ENST00000440240 NR4A2P43354 598 aa18.05■□□□□ 0.48
CPNE1-219ENST00000440240 RPS5P46782 204 aaKnown RBP18.05■□□□□ 0.48
CPNE1-219ENST00000440240 CLDN17P56750 224 aa18.05■□□□□ 0.48
CPNE1-219ENST00000440240 ROR2Q01974 943 aaKnown RBP18.05■□□□□ 0.48
CPNE1-219ENST00000440240 NAAAQ02083 359 aa18.05■□□□□ 0.48
CPNE1-219ENST00000440240 FADDQ13158 208 aa18.05■□□□□ 0.48
CPNE1-219ENST00000440240 C5orf46Q6UWT4 87 aa18.05■□□□□ 0.48
CPNE1-219ENST00000440240 SLC46A3Q7Z3Q1 461 aa18.05■□□□□ 0.48
CPNE1-219ENST00000440240 PHC2Q8IXK0 858 aa18.05■□□□□ 0.48
CPNE1-219ENST00000440240 KDM8Q8N371 416 aa18.05■□□□□ 0.48
CPNE1-219ENST00000440240 ZNF540Q8NDQ6 660 aa18.05■□□□□ 0.48
CPNE1-219ENST00000440240 BBS10Q8TAM1 723 aa18.05■□□□□ 0.48
CPNE1-219ENST00000440240 GTF2H4Q92759 462 aa18.05■□□□□ 0.48
CPNE1-219ENST00000440240 OXGR1Q96P68 337 aa18.05■□□□□ 0.48
CPNE1-219ENST00000440240 SORCS2Q96PQ0 1159 aa18.05■□□□□ 0.48
CPNE1-219ENST00000440240 OR52B2Q96RD2 323 aa18.05■□□□□ 0.48
CPNE1-219ENST00000440240 C12orf10Q9HB07 376 aa18.05■□□□□ 0.48
CPNE1-219ENST00000440240 A0A096LPE4 126 aa18.04■□□□□ 0.48
CPNE1-219ENST00000440240 A0A1W2PPZ6 126 aa18.04■□□□□ 0.48
CPNE1-219ENST00000440240 C5orf58C9J3I9 102 aa18.04■□□□□ 0.48
CPNE1-219ENST00000440240 RPL36A-HNRNPH2H7BZ11 118 aa18.04■□□□□ 0.48
CPNE1-219ENST00000440240 NR5A2O00482 541 aa18.04■□□□□ 0.48
CPNE1-219ENST00000440240 PHF1O43189 567 aaPredicted RBP18.04■□□□□ 0.48
CPNE1-219ENST00000440240 SLC43A1O75387 559 aa18.04■□□□□ 0.48
CPNE1-219ENST00000440240 IGLV1-44P01699 117 aa18.04■□□□□ 0.48
CPNE1-219ENST00000440240 OR4A8P0C604 315 aa18.04■□□□□ 0.48
CPNE1-219ENST00000440240 BMP2P12643 396 aa18.04■□□□□ 0.48
CPNE1-219ENST00000440240 ETS2P15036 469 aa18.04■□□□□ 0.48
CPNE1-219ENST00000440240 THBS2P35442 1172 aa18.04■□□□□ 0.48
CPNE1-219ENST00000440240 EGR4Q05215 589 aa18.04■□□□□ 0.48
CPNE1-219ENST00000440240 C1DQ13901 141 aaKnown RBP18.04■□□□□ 0.48
CPNE1-219ENST00000440240 GGTLC2Q14390 218 aa18.04■□□□□ 0.48
CPNE1-219ENST00000440240 EFNB3Q15768 340 aa18.04■□□□□ 0.48
CPNE1-219ENST00000440240 ADIPOQQ15848 244 aa18.04■□□□□ 0.48
CPNE1-219ENST00000440240 LINGO2Q7L985 606 aa18.04■□□□□ 0.48
CPNE1-219ENST00000440240 NET1Q7Z628 596 aaPredicted RBP18.04■□□□□ 0.48
CPNE1-219ENST00000440240 OR9I1Q8NGQ6 314 aa18.04■□□□□ 0.48
CPNE1-219ENST00000440240 KTI12Q96EK9 354 aaPredicted RBP18.04■□□□□ 0.48
CPNE1-219ENST00000440240 PTDSS2Q9BVG9 487 aa18.04■□□□□ 0.48
CPNE1-219ENST00000440240 PAIP1Q9H074 479 aaKnown RBP18.04■□□□□ 0.48
CPNE1-219ENST00000440240 LOC102725191A0A1B0GVB3 256 aa18.03■□□□□ 0.48
CPNE1-219ENST00000440240 ZNF432O94892 652 aa18.03■□□□□ 0.48
CPNE1-219ENST00000440240 IGKV3-15P01624 115 aa18.03■□□□□ 0.48
CPNE1-219ENST00000440240 NUDT7P0C024 238 aa18.03■□□□□ 0.48
CPNE1-219ENST00000440240 CECR9P0C854 216 aa18.03■□□□□ 0.48
CPNE1-219ENST00000440240 CBR1P16152 277 aa18.03■□□□□ 0.48
CPNE1-219ENST00000440240 HOXC5Q00444 222 aa18.03■□□□□ 0.48
CPNE1-219ENST00000440240 FAM69AQ5T7M9 428 aa18.03■□□□□ 0.48
CPNE1-219ENST00000440240 FAM166AQ6J272 317 aa18.03■□□□□ 0.48
CPNE1-219ENST00000440240 C6orf89Q6UWU4 347 aa18.03■□□□□ 0.48
CPNE1-219ENST00000440240 MAVSQ7Z434 540 aa18.03■□□□□ 0.48
CPNE1-219ENST00000440240 CCDC36Q8IYA8 594 aa18.03■□□□□ 0.48
CPNE1-219ENST00000440240 GPR137CQ8N3F9 429 aa18.03■□□□□ 0.48
CPNE1-219ENST00000440240 LSMEM1Q8N8F7 131 aa18.03■□□□□ 0.48
CPNE1-219ENST00000440240 MAL2Q969L2 176 aa18.03■□□□□ 0.48
CPNE1-219ENST00000440240 FOXN4Q96NZ1 517 aa18.03■□□□□ 0.48
CPNE1-219ENST00000440240 RAB1BQ9H0U4 201 aa18.03■□□□□ 0.48
CPNE1-219ENST00000440240 PLK3Q9H4B4 646 aa18.03■□□□□ 0.48
CPNE1-219ENST00000440240 KCNS2Q9ULS6 477 aa18.03■□□□□ 0.48
CPNE1-219ENST00000440240 AIM2O14862 343 aa18.02■□□□□ 0.48
CPNE1-219ENST00000440240 FZD7O75084 574 aa18.02■□□□□ 0.48
CPNE1-219ENST00000440240 ZNF16P17020 682 aaPredicted RBP18.02■□□□□ 0.48
CPNE1-219ENST00000440240 PRKAR1BP31321 381 aa18.02■□□□□ 0.48
CPNE1-219ENST00000440240 MAGOHP61326 146 aaKnown RBP18.02■□□□□ 0.48
CPNE1-219ENST00000440240 TUBA1BP68363 451 aa18.02■□□□□ 0.48
CPNE1-219ENST00000440240 TUBA4AP68366 448 aa18.02■□□□□ 0.48
CPNE1-219ENST00000440240 ARF1P84077 181 aaKnown RBP18.02■□□□□ 0.48
CPNE1-219ENST00000440240 CARTPTQ16568 116 aa18.02■□□□□ 0.48
CPNE1-219ENST00000440240 SLC2A7Q6PXP3 512 aa18.02■□□□□ 0.48
CPNE1-219ENST00000440240 VHLLQ6RSH7 139 aa18.02■□□□□ 0.48
CPNE1-219ENST00000440240 TUBA1AQ71U36 451 aa18.02■□□□□ 0.48
CPNE1-219ENST00000440240 H1FNTQ75WM6 255 aaPredicted RBP18.02■□□□□ 0.48
CPNE1-219ENST00000440240 GOLGA6L1Q8N7Z2 621 aa18.02■□□□□ 0.48
CPNE1-219ENST00000440240 PIK3C3Q8NEB9 887 aa18.02■□□□□ 0.48
CPNE1-219ENST00000440240 NUP37Q8NFH4 326 aa18.02■□□□□ 0.48
CPNE1-219ENST00000440240 DNAJA4Q8WW22 397 aaPredicted RBP18.02■□□□□ 0.48
CPNE1-219ENST00000440240 SLC38A4Q969I6 547 aa18.02■□□□□ 0.48
CPNE1-219ENST00000440240 NELFAQ9H3P2 528 aa18.02■□□□□ 0.48
CPNE1-219ENST00000440240 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.01■□□□□ 0.471e-8■■■□□ 15.5
CPNE1-219ENST00000440240 LOC100289279A0A1B0GTE1 492 aa18.01■□□□□ 0.47
CPNE1-219ENST00000440240 AKAP8O43823 692 aaKnown RBP18.01■□□□□ 0.47
CPNE1-219ENST00000440240 ERCC1P07992 297 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms