RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 BHLHE40O14503 412 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 RNF13O43567 381 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 WBP4O75554 376 aaKnown RBP12.3□□□□□ -0.44
VAPB-202ENST00000395802 WISP1O95388 367 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 CRYABP02511 175 aaKnown RBP12.3□□□□□ -0.44
VAPB-202ENST00000395802 CD14P08571 375 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 IGFBP1P08833 259 aaPredicted RBP12.3□□□□□ -0.44
VAPB-202ENST00000395802 CCDC159P0C7I6 412 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 ZNF3P17036 446 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 PAICSP22234 425 aaKnown RBP12.3□□□□□ -0.44
VAPB-202ENST00000395802 AQP2P41181 271 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 NR1H2P55055 460 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 OR2B6P58173 313 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 RAC3P60763 192 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 RPS3AP61247 264 aaKnown RBP12.3□□□□□ -0.44
VAPB-202ENST00000395802 FOXK2Q01167 660 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 RPL18Q07020 188 aaKnown RBP12.3□□□□□ -0.44
VAPB-202ENST00000395802 PUDPQ08623 228 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 SLC25A30Q5SVS4 291 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 GPR139Q6DWJ6 353 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 ASB18Q6ZVZ8 466 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 MEIOBQ8N635 442 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 ANKK1Q8NFD2 765 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 OR8D4Q8NGM9 314 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 ZNF417Q8TAU3 575 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 UBE2FQ969M7 185 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 ZNF587Q96SQ5 575 aaPredicted RBP12.3□□□□□ -0.44
VAPB-202ENST00000395802 FN3KQ9H479 309 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 FANCFQ9NPI8 374 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 INIPQ9NRY2 104 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 SCN3BQ9NY72 215 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 GRHPRQ9UBQ7 328 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 IL20RAQ9UHF4 553 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 KLHL21Q9UJP4 597 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 RNF6Q9Y252 685 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 TRGV5A0A0B4J1U4 118 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 MED19A0JLT2 244 aaPredicted RBP12.3□□□□□ -0.44
VAPB-202ENST00000395802 PLPP3O14495 311 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 SURF4O15260 269 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 IMPDH2P12268 514 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 GABRB1P18505 474 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 CARD18P57730 90 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 FXYD6P3P58550 94 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 GABARAPL2P60520 117 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 FOXK1P85037 733 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 FHL1Q13642 323 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 TMEM225Q6GV28 225 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 ACSM5Q6NUN0 579 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 HDDC2Q7Z4H3 204 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 PXKQ7Z7A4 578 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 IQCF1Q8N6M8 205 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 KDF1Q8NAX2 398 aaPredicted RBP12.3□□□□□ -0.44
VAPB-202ENST00000395802 NEIL3Q8TAT5 605 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 RFKQ969G6 155 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 ABTB1Q969K4 478 aaPredicted RBP12.3□□□□□ -0.44
VAPB-202ENST00000395802 ERMAPQ96PL5 475 aaPredicted RBP12.3□□□□□ -0.44
VAPB-202ENST00000395802 CMC2Q9NRP2 79 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 RASSF1Q9NS23 344 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 TAS2R5Q9NYW4 299 aa12.3□□□□□ -0.44
VAPB-202ENST00000395802 IGF2RP11717 2491 aa12.29□□□□□ -0.44
VAPB-202ENST00000395802 A0A1W2PNR3 127 aa12.29□□□□□ -0.44
VAPB-202ENST00000395802 A0A1W2PNV4 684 aa12.29□□□□□ -0.44
VAPB-202ENST00000395802 NPIPB13A6NJU9 1138 aa12.29□□□□□ -0.44
VAPB-202ENST00000395802 NPIPB4C9JG80 1138 aa12.29□□□□□ -0.44
VAPB-202ENST00000395802 TAF4O00268 1085 aa12.29□□□□□ -0.44
VAPB-202ENST00000395802 EIF1AYO14602 144 aaKnown RBP12.29□□□□□ -0.44
VAPB-202ENST00000395802 TLX2O43763 284 aaPredicted RBP12.29□□□□□ -0.44
VAPB-202ENST00000395802 SFTPCP11686 197 aa12.29□□□□□ -0.44
VAPB-202ENST00000395802 FMO3P31513 532 aa12.29□□□□□ -0.44
VAPB-202ENST00000395802 CD97P48960 835 aa12.29□□□□□ -0.44
VAPB-202ENST00000395802 CTXN1P60606 82 aa12.29□□□□□ -0.44
VAPB-202ENST00000395802 ZNF239Q16600 458 aaKnown RBP12.29□□□□□ -0.44
VAPB-202ENST00000395802 FOXB2Q5VYV0 432 aa12.29□□□□□ -0.44
VAPB-202ENST00000395802 FAM205BPQ63HN1 556 aa12.29□□□□□ -0.44
VAPB-202ENST00000395802 HBMQ6B0K9 141 aa12.29□□□□□ -0.44
VAPB-202ENST00000395802 THSD4Q6ZMP0 1018 aa12.29□□□□□ -0.44
VAPB-202ENST00000395802 CHMP1BQ7LBR1 199 aa12.29□□□□□ -0.44
VAPB-202ENST00000395802 SATL1Q86VE3 508 aa12.29□□□□□ -0.44
VAPB-202ENST00000395802 FAM26EQ8N5C1 309 aa12.29□□□□□ -0.44
VAPB-202ENST00000395802 TCEANCQ8N8B7 351 aa12.29□□□□□ -0.44
VAPB-202ENST00000395802 OR4Q3Q8NH05 313 aa12.29□□□□□ -0.44
VAPB-202ENST00000395802 OR2V1Q8NHB1 315 aa12.29□□□□□ -0.44
VAPB-202ENST00000395802 C9orf43Q8TAL5 461 aaPredicted RBP12.29□□□□□ -0.44
VAPB-202ENST00000395802 TMEM163Q8TC26 289 aa12.29□□□□□ -0.44
VAPB-202ENST00000395802 CPNE4Q96A23 557 aaPredicted RBP12.29□□□□□ -0.44
VAPB-202ENST00000395802 KATNB1Q9BVA0 655 aa12.29□□□□□ -0.44
VAPB-202ENST00000395802 PAK1IP1Q9NWT1 392 aaPredicted RBP12.29□□□□□ -0.44
VAPB-202ENST00000395802 ZNF226Q9NYT6 803 aa12.29□□□□□ -0.44
VAPB-202ENST00000395802 H2AFY2Q9P0M6 372 aaPredicted RBP12.29□□□□□ -0.44
VAPB-202ENST00000395802 RASD1Q9Y272 281 aa12.29□□□□□ -0.44
VAPB-202ENST00000395802 TPRKBQ9Y3C4 175 aa12.29□□□□□ -0.44
VAPB-202ENST00000395802 NOX1Q9Y5S8 564 aa12.29□□□□□ -0.44
VAPB-202ENST00000395802 LOC102725191A0A1B0GVB3 256 aa12.28□□□□□ -0.44
VAPB-202ENST00000395802 MCIDASD6RGH6 385 aa12.28□□□□□ -0.44
VAPB-202ENST00000395802 XKRYO14609 159 aa12.28□□□□□ -0.44
VAPB-202ENST00000395802 XPNPEP2O43895 674 aa12.28□□□□□ -0.44
VAPB-202ENST00000395802 PPP1R3DO95685 299 aa12.28□□□□□ -0.44
VAPB-202ENST00000395802 HTR1AP08908 422 aa12.28□□□□□ -0.44
VAPB-202ENST00000395802 SDHAP31040 664 aa12.28□□□□□ -0.44
VAPB-202ENST00000395802 DAP3P51398 398 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms