RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 LINC01565O15544 149 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 PRAMEF4O60810 478 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 TK1P04183 234 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 HTR2BP41595 481 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 GK2Q14410 553 aaPredicted RBP16■□□□□ 0.15
SHANK1-201ENST00000293441 OR52W1Q6IF63 320 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 ABHD17CQ6PCB6 329 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 LSMEM2Q8N112 164 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 ZNF687Q8N1G0 1237 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 SDHAF2Q9NX18 166 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 MCRIP1C9JLW8 97 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 STK17BO94768 372 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 HOXB5P09067 269 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 CLDN6P56747 220 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 RPL22L1Q6P5R6 122 aaKnown RBP16■□□□□ 0.15
SHANK1-201ENST00000293441 ZNF836Q6ZNA1 936 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 OLIG3Q7RTU3 272 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 PATE1Q8WXA2 126 aa16■□□□□ 0.15
SHANK1-201ENST00000293441 ACOD1A6NK06 481 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 IGHV3-9P01782 118 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 MLLT11Q13015 90 aaPredicted RBP15.99■□□□□ 0.15
SHANK1-201ENST00000293441 OR4N2Q8NGD1 307 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 ZFAND2BQ8WV99 257 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 SERTAD4Q9NUC0 356 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 SERPINA7P05543 415 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 NRG4Q8WWG1 115 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 ZBTB8AQ96BR9 441 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 ELMOD3Q96FG2 381 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 STEAP1Q9UHE8 339 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 MOKQ9UQ07 419 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 EIF1BO60739 113 aaKnown RBP15.99■□□□□ 0.15
SHANK1-201ENST00000293441 MAKP20794 623 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 PRKACBP22694 351 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 EIF1P41567 113 aaKnown RBP15.99■□□□□ 0.15
SHANK1-201ENST00000293441 MFAP5Q13361 173 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 SMN1Q16637 294 aaKnown RBP15.99■□□□□ 0.15
SHANK1-201ENST00000293441 GOT1L1Q8NHS2 421 aaPredicted RBP15.99■□□□□ 0.15
SHANK1-201ENST00000293441 A4GALTQ9NPC4 353 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 GIPRP48546 466 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 ZNF91Q05481 1191 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 PYCR3Q53H96 274 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 AADACL3Q5VUY0 350 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 ZNF813Q6ZN06 617 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 OR4M1Q8NGD0 313 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 SLC23A2Q9UGH3 650 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 BOLA2-SMG1P6H3BVE0 249 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 SOCS6O14544 535 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 WNT11O96014 354 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 PRICKLE2Q7Z3G6 844 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 POM121BA6NF01 834 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 TMEM212A6NML5 194 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 PIP5K1CO60331 668 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 GLB1L2Q8IW92 636 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 OR13C9Q8NGT0 318 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 FNDC8Q8TC99 324 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 STK35Q8TDR2 534 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 PRR14Q9BWN1 585 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 WDR76Q9H967 626 aa15.99■□□□□ 0.15
SHANK1-201ENST00000293441 GM2AP17900 193 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 DAPP51397 102 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 TAS2R19P59542 299 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 DEDD2Q8WXF8 326 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 P2RY10O00398 339 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 PRICKLE3O43900 615 aaPredicted RBP15.98■□□□□ 0.15
SHANK1-201ENST00000293441 GIFP27352 417 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 MRPS10P82664 201 aaKnown RBP15.98■□□□□ 0.15
SHANK1-201ENST00000293441 COMMD7Q86VX2 200 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 ADAMTS14Q8WXS8 1223 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 DEFB127Q9H1M4 99 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 OR6C6A6NF89 314 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 AGPAT2O15120 278 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 IFNA10P01566 189 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 NKAIN1Q4KMZ8 207 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 CCDC28AQ8IWP9 274 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 FRMD1Q8N878 549 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 ZFP90Q8TF47 636 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 NEURL3Q96EH8 262 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 WWTR1Q9GZV5 400 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 GNG12Q9UBI6 72 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 EVPLQ92817 2033 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 MDFIC2A0A1B0GVS7 189 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 GAPDHSO14556 408 aaPredicted RBP15.98■□□□□ 0.15
SHANK1-201ENST00000293441 GPR85P60893 370 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 TBC1D28Q2M2D7 210 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 METAP1DQ6UB28 335 aaPredicted RBP15.98■□□□□ 0.15
SHANK1-201ENST00000293441 GDF7Q7Z4P5 450 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 OCSTAMPQ9BR26 566 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 HRASLSQ9HDD0 168 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 TNFRSF10CO14798 259 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 DPM1O60762 260 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 NXPH2O95156 264 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 SLC9A3R2Q15599 337 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 PM20D2Q8IYS1 436 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 CHTF18Q8WVB6 975 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 MUL1Q969V5 352 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 SLC19A3Q9BZV2 496 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 SELENOIQ9C0D9 397 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 ARRDC1-AS1Q9H2J1 176 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 NOX3Q9HBY0 568 aa15.98■□□□□ 0.15
SHANK1-201ENST00000293441 NRG2O14511 850 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms