RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Zfp869Q9DC47 529 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr1025-ps1A0A140T8K3 312 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Zfp994J3QM38 661 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Slc47a2Q3V050 573 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 D11Wsu47eQ6PIX9 558 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Rims3Q80U57 307 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr821Q8VG45 310 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Cts7Q91ZF2 331 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Mrpl37Q921S7 423 aaKnown RBP14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Clcf1Q9QZM3 225 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Fam136b-psA0A140T8T1 138 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr1112A2ATA0 318 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Scgb1b30A2BH64 92 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Vmn2r56E9Q4U5 779 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Vmn1r58G3X9U3 310 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Gstm3P19639 218 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr885Q7TRE0 309 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Klhl13Q80TF4 654 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Slc35c1Q8BLX4 363 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 B130006D01RikQ8BRH6 153 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Slc16a14Q8K1C7 512 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Gpn1Q8VCE2 372 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Mrps28Q9CY16 186 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Efcab11Q9D0E5 162 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Ak4Q9WUR9 223 aaKnown RBP14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Ighv16-1A0A0A6YW39 117 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Gm13539A0A1B0GSM6 183 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 A0A1L1STL9 112 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Atpif1O35143 106 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 P58686 83 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 KcnrgQ2TUM3 264 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Ccdc36Q6PDM4 574 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr406Q7TRX0 323 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 MdficQ8BX65 247 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Vmn1r81Q8R286 306 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Slco1a6Q99J94 670 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Mrpl54Q9CPW3 135 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Fhl5Q9WTX7 284 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Srpk3Q9Z0G2 565 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Cnr2P47936 347 aa14.46□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Zdhhc2P59267 366 aa14.46□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Ufd1P70362 307 aa14.46□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Gm527Q4KL13 310 aa14.46□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Tspan12Q8BKT6 305 aa14.46□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Sp110Q8BVK9 445 aa14.46□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Mrps23Q8VE22 177 aaKnown RBP14.46□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Lap3Q9CPY7 519 aa14.46□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Myo5aQ99104 1853 aaKnown RBP14.46□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Gm4131A0A140LJ24 318 aa14.46□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr550E9Q544 316 aa14.46□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 IghmP01872 454 aa14.46□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Acp2P24638 423 aa14.46□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Slco4c1Q8BGD4 722 aa14.46□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Zim1Q8C393 579 aa14.46□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Emid1Q91VF5 444 aa14.46□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Abcg5Q99PE8 652 aa14.46□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 DynapQ9D7M5 161 aa14.46□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Tnfrsf22Q9ER62 198 aa14.46□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Tmeff2Q9QYM9 374 aa14.46□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Gm8765B7ZWJ3 1017 aa14.46□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 ActbP60710 375 aa14.46□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Rps25P62852 125 aaKnown RBP14.46□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Actg1P63260 375 aaKnown RBP14.46□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Q3TTL0 348 aa14.46□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Gm906Q3V0M1 1017 aa14.46□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 B430306N03RikQ6QX36 289 aa14.46□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Znf689Q8BKK5 500 aa14.46□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Orai1Q8BWG9 304 aa14.46□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Kiaa0513Q8R0A7 407 aa14.46□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Pgbd5D3YZI9 523 aa14.46□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 SvaE9PX96 165 aa14.46□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Olfr610E9Q598 315 aa14.46□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 H2-Q10P01898 325 aa14.46□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 CckbrP56481 453 aa14.46□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 C130050O18RikQ497Y9 356 aa14.46□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 ShhQ62226 437 aa14.46□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Rad51ap1Q8C551 337 aa14.46□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Rab38Q8QZZ8 211 aa14.46□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Utp4Q8R2N2 686 aaKnown RBP14.46□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Slc37a4A0A1L1SUI3 450 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Frg2f1Q6P3A2 227 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Hsh2dQ6VYH9 334 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Tmem150bQ8R218 238 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Gabarapl1Q8R3R8 117 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Irf2bp1Q8R3Y8 584 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Stpg4Q9DAG5 247 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Cmtm2aQ9DAR1 169 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Ca7Q9ERQ8 264 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 PolmQ9JIW4 496 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Zfp873A0A1B0GT64 667 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 DdostO54734 441 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Tcte3P11985 191 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Krba1Q6NXZ1 1043 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Znf516Q7TSH3 1157 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Fbxw14Q8C2Y5 466 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 ClpsQ9CQC2 113 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Lamtor5Q9D1L9 91 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Zfp81B8JJZ7 531 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Olfr294F7CWV4 335 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Gm4141K9J7H2 306 aa14.45□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 52.4 ms