RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 URB1O60287 2271 aaKnown RBP12.65□□□□□ -0.38
SCARB2-227ENST00000640957 CFAP54Q96N23 3096 aa12.65□□□□□ -0.38
SCARB2-227ENST00000640957 SCN5AQ14524 2016 aa12.65□□□□□ -0.39
SCARB2-227ENST00000640957 F5H0A9 414 aaPredicted RBP12.64□□□□□ -0.39
SCARB2-227ENST00000640957 CD3DP04234 171 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 ADH1AP07327 375 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 NTSP30990 170 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 VEGFBP49765 207 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 KHKP50053 298 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 MESP2Q0VG99 397 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 FAM69AQ5T7M9 428 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 H3F3CQ6NXT2 135 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 RHOUQ7L0Q8 258 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 DPPA4Q7L190 304 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 OR2W3Q7Z3T1 314 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 ADAMTS15Q8TE58 950 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 S100A16Q96FQ6 103 aaKnown RBP12.64□□□□□ -0.39
SCARB2-227ENST00000640957 LMF1Q96S06 567 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 ACSS1Q9NUB1 689 aaPredicted RBP12.64□□□□□ -0.39
SCARB2-227ENST00000640957 SLC23A2Q9UGH3 650 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 ICKQ9UPZ9 632 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 BRWD1Q9NSI6 2320 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 A0A1W2PR48 441 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 GMFGO60234 142 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 WDPCPO95876 746 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 HMGN1P05114 100 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 CTSLP07711 333 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 FPR3P25089 353 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 CSF2RBP32927 897 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 DYRK1AQ13627 763 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 PLEKHN1Q494U1 663 aaPredicted RBP12.64□□□□□ -0.39
SCARB2-227ENST00000640957 EXOSC6Q5RKV6 272 aaKnown RBP12.64□□□□□ -0.39
SCARB2-227ENST00000640957 ZNF836Q6ZNA1 936 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 RD3Q7Z3Z2 195 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 NUDT13Q86X67 352 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 GLB1L2Q8IW92 636 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 OR6V1Q8N148 313 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 BEST3Q8N1M1 668 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 RXFP4Q8TDU9 374 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 CASTOR1Q8WTX7 329 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 SFT2D1Q8WV19 159 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 PNPLA2Q96AD5 504 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 PARP12Q9H0J9 701 aaKnown RBP12.64□□□□□ -0.39
SCARB2-227ENST00000640957 ADAP2Q9NPF8 381 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 SPHK2Q9NRA0 654 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 C2orf42Q9NWW7 574 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 IL36AQ9UHA7 158 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 ZNF337Q9Y3M9 751 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 WDFY3Q8IZQ1 3526 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 TRAV18A0A075B6X5 111 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 TBC1D3BA6NDS4 549 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 APOC1P02654 83 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 PCCBP05166 539 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 TIMP2P16035 220 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 STAT5AP42229 794 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 PTGFRP43088 359 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 GMFBP60983 142 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 PDZK1IP1Q13113 114 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 SQSTM1Q13501 440 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 FAM111BQ6SJ93 734 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 TPRA1Q86W33 373 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 OR10R2Q8NGX6 335 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 OR10AC1Q8NH08 325 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 ZPLD1Q8TCW7 415 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 TRMT2BQ96GJ1 504 aaKnown RBP12.64□□□□□ -0.39
SCARB2-227ENST00000640957 MS4A8Q9BY19 250 aa12.64□□□□□ -0.39
SCARB2-227ENST00000640957 MRPS23Q9Y3D9 190 aaKnown RBP12.64□□□□□ -0.39
SCARB2-227ENST00000640957 FAM86C2PA6NEL3 165 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 ZNF860A6NHJ4 632 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 PRKNO60260 465 aaPredicted RBP12.63□□□□□ -0.39
SCARB2-227ENST00000640957 NT5EP21589 574 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 EPHA4P54764 986 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 UBE2NLQ5JXB2 153 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 HENMT1Q5T8I9 393 aaKnown RBP12.63□□□□□ -0.39
SCARB2-227ENST00000640957 TMEM215Q68D42 235 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 DMKNQ6E0U4 476 aaPredicted RBP12.63□□□□□ -0.39
SCARB2-227ENST00000640957 SLC39A5Q6ZMH5 540 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 Q6ZNB5 142 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 HTR3DQ70Z44 454 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 PXKQ7Z7A4 578 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 ZNF547Q8IVP9 402 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 SFTPA1Q8IWL2 248 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 ZNF511Q8NB15 262 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 NUBPLQ8TB37 319 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 TFGQ92734 400 aaPredicted RBP12.63□□□□□ -0.39
SCARB2-227ENST00000640957 NKD1Q969G9 470 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 SLC35A4Q96G79 324 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 VRK1Q99986 396 aaPredicted RBP12.63□□□□□ -0.39
SCARB2-227ENST00000640957 IFITM5A6NNB3 132 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 RIIAD1A6NNX1 92 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 J3QRE1 110 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 GREM1O60565 184 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 ZNF254O75437 659 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 SC5DO75845 299 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 LAG3P18627 525 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 ARFIP1P53367 373 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 NRG3P56975 720 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 TAS2R20P59543 309 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 SIRPAP78324 504 aa12.63□□□□□ -0.39
SCARB2-227ENST00000640957 IKZF1Q13422 519 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms