RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 SLC34A1Q06495 639 aa17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 C4orf17Q53FE4 359 aa17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 EMC4Q5J8M3 183 aa17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 FAHD1Q6P587 224 aa17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 CLEC18BQ6UXF7 455 aa17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 ADGRE4PQ86SQ3 457 aa17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 STK32CQ86UX6 486 aa17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 SCAIQ8N9R8 606 aa17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 CLEC18CQ8NCF0 446 aa17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 OR5M9Q8NGP3 310 aa17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 GNPDA2Q8TDQ7 276 aa17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 SDCCAG3Q96C92 435 aa17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 SLC25A36Q96CQ1 311 aa17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 GPA33Q99795 319 aa17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 TUBA1CQ9BQE3 449 aa17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 PNPLA3Q9NST1 481 aa17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 ERRFI1Q9UJM3 462 aaPredicted RBP17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 TINAGQ9UJW2 476 aa17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 USP9XQ93008 2570 aaPredicted RBP17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 A0A1B0GUH1 482 aa17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 CDC42EP2O14613 210 aa17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 CASQ2O14958 399 aaPredicted RBP17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 GRPRP30550 384 aa17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 SLC9A3P48764 834 aa17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 NUP107P57740 925 aa17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 TSPAN31Q12999 210 aa17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 SGCBQ16585 318 aa17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 ZNF239Q16600 458 aaKnown RBP17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 PAQR6Q6TCH4 344 aa17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 CHMP1BQ7LBR1 199 aa17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 FJX1Q86VR8 437 aa17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 MEX3DQ86XN8 651 aaKnown RBP17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 DOLPP1Q86YN1 238 aa17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 LRRC17Q8N6Y2 441 aa17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 ZHX1-C8orf76Q96EF9 292 aa17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 ZNF845Q96IR2 970 aaPredicted RBP17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 CIB1Q99828 191 aa17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 MRPL39Q9NYK5 338 aaKnown RBP17.75■□□□□ 0.43
PDLIM2-221ENST00000622702 WDR1O75083 606 aa17.74■□□□□ 0.43
PDLIM2-221ENST00000622702 SAGP10523 405 aaPredicted RBP17.74■□□□□ 0.43
PDLIM2-221ENST00000622702 GABRA1P14867 456 aa17.74■□□□□ 0.43
PDLIM2-221ENST00000622702 GTF2E2P29084 291 aaKnown RBP17.74■□□□□ 0.43
PDLIM2-221ENST00000622702 PTGER4P35408 488 aa17.74■□□□□ 0.43
PDLIM2-221ENST00000622702 SF3B4Q15427 424 aaKnown RBP eCLIP17.74■□□□□ 0.43
PDLIM2-221ENST00000622702 TRIP10Q15642 601 aa17.74■□□□□ 0.43
PDLIM2-221ENST00000622702 ANKDD1AQ495B1 522 aa17.74■□□□□ 0.43
PDLIM2-221ENST00000622702 OTUD3Q5T2D3 398 aaPredicted RBP17.74■□□□□ 0.43
PDLIM2-221ENST00000622702 CD300LDQ6UXZ3 194 aa17.74■□□□□ 0.43
PDLIM2-221ENST00000622702 CD163Q86VB7 1156 aa17.74■□□□□ 0.43
PDLIM2-221ENST00000622702 ADPRHL1Q8NDY3 354 aa17.74■□□□□ 0.43
PDLIM2-221ENST00000622702 DNAJC9Q8WXX5 260 aa17.74■□□□□ 0.43
PDLIM2-221ENST00000622702 UCN2Q96RP3 112 aa17.74■□□□□ 0.43
PDLIM2-221ENST00000622702 C9orf16Q9BUW7 83 aa17.74■□□□□ 0.43
PDLIM2-221ENST00000622702 ASPNQ9BXN1 380 aa17.74■□□□□ 0.43
PDLIM2-221ENST00000622702 B3GALT5Q9Y2C3 310 aa17.74■□□□□ 0.43
PDLIM2-221ENST00000622702 ZNF175Q9Y473 711 aa17.74■□□□□ 0.43
PDLIM2-221ENST00000622702 LRRK2Q5S007 2527 aa17.73■□□□□ 0.43
PDLIM2-221ENST00000622702 FIGNL2A6NMB9 653 aa17.73■□□□□ 0.43
PDLIM2-221ENST00000622702 CLCA1A8K7I4 914 aa17.73■□□□□ 0.43
PDLIM2-221ENST00000622702 M0R082 166 aa17.73■□□□□ 0.43
PDLIM2-221ENST00000622702 PDLIM1O00151 329 aa17.73■□□□□ 0.43
PDLIM2-221ENST00000622702 CCL21O00585 134 aa17.73■□□□□ 0.43
PDLIM2-221ENST00000622702 HOXD4P09016 255 aaPredicted RBP17.73■□□□□ 0.43
PDLIM2-221ENST00000622702 TSPAN19P0C672 248 aa17.73■□□□□ 0.43
PDLIM2-221ENST00000622702 ENPP1P22413 925 aa17.73■□□□□ 0.43
PDLIM2-221ENST00000622702 RPS4XP62701 263 aaKnown RBP17.73■□□□□ 0.43
PDLIM2-221ENST00000622702 PPP2R2BQ00005 443 aa17.73■□□□□ 0.43
PDLIM2-221ENST00000622702 COX10Q12887 443 aa17.73■□□□□ 0.43
PDLIM2-221ENST00000622702 H1FNTQ75WM6 255 aaPredicted RBP17.73■□□□□ 0.43
PDLIM2-221ENST00000622702 ATG16L2Q8NAA4 619 aa17.73■□□□□ 0.43
PDLIM2-221ENST00000622702 OR5J2Q8NH18 312 aa17.73■□□□□ 0.43
PDLIM2-221ENST00000622702 ZNF417Q8TAU3 575 aa17.73■□□□□ 0.43
PDLIM2-221ENST00000622702 EME1Q96AY2 570 aa17.73■□□□□ 0.43
PDLIM2-221ENST00000622702 ZNF587Q96SQ5 575 aaPredicted RBP17.73■□□□□ 0.43
PDLIM2-221ENST00000622702 NIPSNAP1Q9BPW8 284 aa17.73■□□□□ 0.43
PDLIM2-221ENST00000622702 NAA11Q9BSU3 229 aaPredicted RBP17.73■□□□□ 0.43
PDLIM2-221ENST00000622702 CHST11Q9NPF2 352 aa17.73■□□□□ 0.43
PDLIM2-221ENST00000622702 MCTS1Q9ULC4 181 aaKnown RBP17.73■□□□□ 0.43
PDLIM2-221ENST00000622702 AQP7P3A6NL99 342 aa17.72■□□□□ 0.43
PDLIM2-221ENST00000622702 SMAD9O15198 467 aaKnown RBP17.72■□□□□ 0.43
PDLIM2-221ENST00000622702 AKR7A3O95154 331 aa17.72■□□□□ 0.43
PDLIM2-221ENST00000622702 SYNGR4O95473 234 aa17.72■□□□□ 0.43
PDLIM2-221ENST00000622702 HIST1H2ABP04908 130 aa17.72■□□□□ 0.43
PDLIM2-221ENST00000622702 POU2F1P14859 743 aa17.72■□□□□ 0.43
PDLIM2-221ENST00000622702 GSTM3P21266 225 aa17.72■□□□□ 0.43
PDLIM2-221ENST00000622702 DAPP51397 102 aa17.72■□□□□ 0.43
PDLIM2-221ENST00000622702 P2RY4P51582 365 aa17.72■□□□□ 0.43
PDLIM2-221ENST00000622702 FHL1Q13642 323 aa17.72■□□□□ 0.43
PDLIM2-221ENST00000622702 PON3Q15166 354 aa17.72■□□□□ 0.43
PDLIM2-221ENST00000622702 ACSF3Q4G176 576 aaPredicted RBP17.72■□□□□ 0.43
PDLIM2-221ENST00000622702 ZNF585AQ6P3V2 769 aa17.72■□□□□ 0.43
PDLIM2-221ENST00000622702 C3P1Q6ZMU1 363 aa17.72■□□□□ 0.43
PDLIM2-221ENST00000622702 HIST3H2AQ7L7L0 130 aa17.72■□□□□ 0.43
PDLIM2-221ENST00000622702 NANOGNBQ7Z5D8 188 aa17.72■□□□□ 0.43
PDLIM2-221ENST00000622702 OAFQ86UD1 273 aa17.72■□□□□ 0.43
PDLIM2-221ENST00000622702 TMEM99Q8N816 258 aa17.72■□□□□ 0.43
PDLIM2-221ENST00000622702 OR13C2Q8NGS9 318 aa17.72■□□□□ 0.43
PDLIM2-221ENST00000622702 HIST1H2ACQ93077 130 aa17.72■□□□□ 0.43
PDLIM2-221ENST00000622702 GTPBP3Q969Y2 492 aaKnown RBP17.72■□□□□ 0.43
PDLIM2-221ENST00000622702 RBM4BQ9BQ04 359 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms