RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 ZFP28Q8NHY6 868 aa4.92□□□□□ -1.62
DNMT1-220ENST00000589351 FAM76AQ8TAV0 307 aa4.92□□□□□ -1.62
DNMT1-220ENST00000589351 SLC9A6Q92581 669 aa4.92□□□□□ -1.62
DNMT1-220ENST00000589351 PROX1Q92786 737 aa4.92□□□□□ -1.62
DNMT1-220ENST00000589351 ELP4Q96EB1 424 aa4.92□□□□□ -1.62
DNMT1-220ENST00000589351 KLHL15Q96M94 604 aa4.92□□□□□ -1.62
DNMT1-220ENST00000589351 ZNF382Q96SR6 550 aa4.92□□□□□ -1.62
DNMT1-220ENST00000589351 HBEGFQ99075 208 aa4.92□□□□□ -1.62
DNMT1-220ENST00000589351 VRK1Q99986 396 aaPredicted RBP4.92□□□□□ -1.62
DNMT1-220ENST00000589351 TRAF4Q9BUZ4 470 aaPredicted RBP4.92□□□□□ -1.62
DNMT1-220ENST00000589351 C1orf43Q9BWL3 253 aa4.92□□□□□ -1.62
DNMT1-220ENST00000589351 POTEKPQ9BYX7 375 aa4.92□□□□□ -1.62
DNMT1-220ENST00000589351 HOXD1Q9GZZ0 328 aa4.92□□□□□ -1.62
DNMT1-220ENST00000589351 UBQLN4Q9NRR5 601 aa4.92□□□□□ -1.62
DNMT1-220ENST00000589351 TBC1D23Q9NUY8 699 aa4.92□□□□□ -1.62
DNMT1-220ENST00000589351 KLHL9Q9P2J3 617 aa4.92□□□□□ -1.62
DNMT1-220ENST00000589351 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.92□□□□□ -1.62
DNMT1-220ENST00000589351 LYVE1Q9Y5Y7 322 aa4.92□□□□□ -1.62
DNMT1-220ENST00000589351 COL6A5A8TX70 2615 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 A0A0J9YW62 118 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 A0A1W2PQD3 144 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 A0A1W2PRB8 838 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 CIB4A0PJX0 185 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 A8MT66 165 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 POC1B-GALNT4F8VUJ3 575 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 M0QX08 132 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 KIF2AO00139 706 aaPredicted RBP4.91□□□□□ -1.62
DNMT1-220ENST00000589351 PPP6CO00743 305 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 LMX1BO60663 402 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 CRCPO75575 148 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 GCM2O75603 506 aaPredicted RBP4.91□□□□□ -1.62
DNMT1-220ENST00000589351 NKX2-2O95096 273 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 OXSR1O95747 527 aaPredicted RBP4.91□□□□□ -1.62
DNMT1-220ENST00000589351 OPN1LWP04000 364 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 GSTA1P08263 222 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 SNRPAP09012 282 aaKnown RBP4.91□□□□□ -1.62
DNMT1-220ENST00000589351 ALOX5P09917 674 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 GAAP10253 952 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 SRD5A1P18405 259 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 GGT1P19440 569 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 ATP6V1C1P21283 382 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 PTAFRP25105 342 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 ELK4P28324 431 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 SFTPDP35247 375 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 GZMKP49863 264 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 FABP6P51161 128 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 PRKAG1P54619 331 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 CDH11P55287 796 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 RAE1P78406 368 aaKnown RBP4.91□□□□□ -1.62
DNMT1-220ENST00000589351 VLDLRP98155 873 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 SQLEQ14534 574 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 STK11Q15831 433 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 ZNF239Q16600 458 aaKnown RBP4.91□□□□□ -1.62
DNMT1-220ENST00000589351 TMEM249Q2WGJ8 235 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 PGGHGQ32M88 737 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 ARL13AQ5H913 290 aaPredicted RBP4.91□□□□□ -1.62
DNMT1-220ENST00000589351 TIMM23BQ5SRD1 257 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 ZNF678Q5SXM1 525 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 DNM1P46Q6ZS02 220 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 Q6ZT83 130 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 RPS27LQ71UM5 84 aaKnown RBP4.91□□□□□ -1.62
DNMT1-220ENST00000589351 MTERF4Q7Z6M4 381 aaKnown RBP4.91□□□□□ -1.62
DNMT1-220ENST00000589351 DTX2Q86UW9 622 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 TDRPQ86YL5 185 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 TUSC5Q8IXB3 177 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 ZNF100Q8IYN0 542 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 GABRG1Q8N1C3 465 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 OR2L13Q8N349 312 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 DRAXINQ8NBI3 349 aaPredicted RBP4.91□□□□□ -1.62
DNMT1-220ENST00000589351 KBTBD8Q8NFY9 601 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 CCDC126Q96EE4 140 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 CHMP6Q96FZ7 201 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 SH3YL1Q96HL8 342 aaPredicted RBP4.91□□□□□ -1.62
DNMT1-220ENST00000589351 METTL2AQ96IZ6 378 aaKnown RBP4.91□□□□□ -1.62
DNMT1-220ENST00000589351 ADGRG7Q96K78 797 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 CLPTM1LQ96KA5 538 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 RNF145Q96MT1 663 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 FAM210AQ96ND0 272 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 AMDHD1Q96NU7 426 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 DHRS9Q9BPW9 319 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 ACPTQ9BZG2 426 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 TRIM2Q9C040 744 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 GLIPR2Q9H4G4 154 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 NCOR1P1Q9H4R4 102 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 TMEM185BQ9H7F4 350 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 MYNNQ9NPC7 610 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 EQTNQ9NQ60 294 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 RRAGDQ9NQL2 400 aaPredicted RBP4.91□□□□□ -1.62
DNMT1-220ENST00000589351 SERINC1Q9NRX5 453 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 CBLN4Q9NTU7 201 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 MED17Q9NVC6 651 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 NDUFAF4Q9P032 175 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 KLHL13Q9P2N7 655 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 PRSS50Q9UI38 385 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 KCNS2Q9ULS6 477 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 B3GALT5Q9Y2C3 310 aa4.91□□□□□ -1.62
DNMT1-220ENST00000589351 IGHV4-30-2A0A087WSY4 118 aa4.9□□□□□ -1.63
DNMT1-220ENST00000589351 GXYLT2A0PJZ3 443 aa4.9□□□□□ -1.63
DNMT1-220ENST00000589351 DPRXA6NFQ7 191 aa4.9□□□□□ -1.63
DNMT1-220ENST00000589351 C17orf51A8MQB3 221 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms