RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 SLCO1B3Q9NPD5 702 aa12.31□□□□□ -0.44
HDAC5-203ENST00000586339 RASD1Q9Y272 281 aa12.31□□□□□ -0.44
HDAC5-203ENST00000586339 USH1CQ9Y6N9 552 aa12.31□□□□□ -0.44
HDAC5-203ENST00000586339 ZNF587BE7ETH6 402 aa12.3□□□□□ -0.44
HDAC5-203ENST00000586339 UBDO15205 165 aa12.3□□□□□ -0.44
HDAC5-203ENST00000586339 FZD7O75084 574 aa12.3□□□□□ -0.44
HDAC5-203ENST00000586339 BMP2P12643 396 aa12.3□□□□□ -0.44
HDAC5-203ENST00000586339 NCF2P19878 526 aaPredicted RBP12.3□□□□□ -0.44
HDAC5-203ENST00000586339 PTNP21246 168 aa12.3□□□□□ -0.44
HDAC5-203ENST00000586339 APOBEC3AP31941 199 aaPredicted RBP12.3□□□□□ -0.44
HDAC5-203ENST00000586339 MRPL19P49406 292 aaKnown RBP12.3□□□□□ -0.44
HDAC5-203ENST00000586339 POLR2JP52435 117 aaKnown RBP12.3□□□□□ -0.44
HDAC5-203ENST00000586339 LOXL1Q08397 574 aaPredicted RBP12.3□□□□□ -0.44
HDAC5-203ENST00000586339 C6orf10Q5SRN2 563 aa12.3□□□□□ -0.44
HDAC5-203ENST00000586339 TMEM225Q6GV28 225 aa12.3□□□□□ -0.44
HDAC5-203ENST00000586339 HIPK1Q86Z02 1210 aa12.3□□□□□ -0.44
HDAC5-203ENST00000586339 MIER2Q8N344 545 aa12.3□□□□□ -0.44
HDAC5-203ENST00000586339 CLIP4Q8N3C7 705 aa12.3□□□□□ -0.44
HDAC5-203ENST00000586339 OR9I1Q8NGQ6 314 aa12.3□□□□□ -0.44
HDAC5-203ENST00000586339 MFSD8Q8NHS3 518 aa12.3□□□□□ -0.44
HDAC5-203ENST00000586339 SPATA3Q8NHX4 192 aa12.3□□□□□ -0.44
HDAC5-203ENST00000586339 BBS10Q8TAM1 723 aa12.3□□□□□ -0.44
HDAC5-203ENST00000586339 VPS33AQ96AX1 596 aa12.3□□□□□ -0.44
HDAC5-203ENST00000586339 C3orf49Q96BT1 292 aa12.3□□□□□ -0.44
HDAC5-203ENST00000586339 BCL2L10Q9HD36 194 aa12.3□□□□□ -0.44
HDAC5-203ENST00000586339 A4GALTQ9NPC4 353 aa12.3□□□□□ -0.44
HDAC5-203ENST00000586339 ADPRHL2Q9NX46 363 aa12.3□□□□□ -0.44
HDAC5-203ENST00000586339 ATP23Q9Y6H3 246 aa12.3□□□□□ -0.44
HDAC5-203ENST00000586339 PMF1-BGLAPU3KQ54 211 aa12.3□□□□□ -0.44
HDAC5-203ENST00000586339 SASH3O75995 380 aa12.29□□□□□ -0.44
HDAC5-203ENST00000586339 KRT33AO76009 404 aa12.29□□□□□ -0.44
HDAC5-203ENST00000586339 AHSA1O95433 338 aa12.29□□□□□ -0.44
HDAC5-203ENST00000586339 PRG2P13727 222 aa12.29□□□□□ -0.44
HDAC5-203ENST00000586339 EFNA4P52798 201 aa12.29□□□□□ -0.44
HDAC5-203ENST00000586339 SH3BGRP55822 239 aaPredicted RBP12.29□□□□□ -0.44
HDAC5-203ENST00000586339 VLDLRP98155 873 aa12.29□□□□□ -0.44
HDAC5-203ENST00000586339 BNIP2Q12982 314 aa12.29□□□□□ -0.44
HDAC5-203ENST00000586339 RGNQ15493 299 aa12.29□□□□□ -0.44
HDAC5-203ENST00000586339 C3orf36Q3SXR2 165 aa12.29□□□□□ -0.44
HDAC5-203ENST00000586339 GTDC1Q4AE62 458 aa12.29□□□□□ -0.44
HDAC5-203ENST00000586339 RPS26P11Q5JNZ5 115 aaPredicted RBP12.29□□□□□ -0.44
HDAC5-203ENST00000586339 EPGNQ6UW88 154 aa12.29□□□□□ -0.44
HDAC5-203ENST00000586339 C5orf46Q6UWT4 87 aa12.29□□□□□ -0.44
HDAC5-203ENST00000586339 C6orf89Q6UWU4 347 aa12.29□□□□□ -0.44
HDAC5-203ENST00000586339 CREB3L2Q70SY1 520 aa12.29□□□□□ -0.44
HDAC5-203ENST00000586339 SERPINA11Q86U17 422 aa12.29□□□□□ -0.44
HDAC5-203ENST00000586339 LSRQ86X29 649 aaPredicted RBP12.29□□□□□ -0.44
HDAC5-203ENST00000586339 MAGEE2Q8TD90 523 aaPredicted RBP12.29□□□□□ -0.44
HDAC5-203ENST00000586339 GTF2H4Q92759 462 aa12.29□□□□□ -0.44
HDAC5-203ENST00000586339 AURKBQ96GD4 344 aaPredicted RBP12.29□□□□□ -0.44
HDAC5-203ENST00000586339 C7orf26Q96N11 449 aa12.29□□□□□ -0.44
HDAC5-203ENST00000586339 TNFRSF13CQ96RJ3 184 aa12.29□□□□□ -0.44
HDAC5-203ENST00000586339 EBF4Q9BQW3 602 aa12.29□□□□□ -0.44
HDAC5-203ENST00000586339 C1QTNF6Q9BXI9 259 aa12.29□□□□□ -0.44
HDAC5-203ENST00000586339 LINC00470Q9BZP3 86 aa12.29□□□□□ -0.44
HDAC5-203ENST00000586339 C12orf10Q9HB07 376 aa12.29□□□□□ -0.44
HDAC5-203ENST00000586339 YAE1D1Q9NRH1 226 aa12.29□□□□□ -0.44
HDAC5-203ENST00000586339 TMEM45AQ9NWC5 275 aa12.29□□□□□ -0.44
HDAC5-203ENST00000586339 RCE1Q9Y256 329 aa12.29□□□□□ -0.44
HDAC5-203ENST00000586339 CHST2Q9Y4C5 530 aa12.29□□□□□ -0.44
HDAC5-203ENST00000586339 CUBNO60494 3623 aa12.29□□□□□ -0.44
HDAC5-203ENST00000586339 ARPC4-TTLL3A0A0A6YYG9 625 aa12.28□□□□□ -0.44
HDAC5-203ENST00000586339 A8MV72 311 aaPredicted RBP12.28□□□□□ -0.44
HDAC5-203ENST00000586339 ATP6V1G2-DDX39BF2Z307 99 aa12.28□□□□□ -0.44
HDAC5-203ENST00000586339 CLIC1O00299 241 aa12.28□□□□□ -0.44
HDAC5-203ENST00000586339 IFNA2P01563 188 aa12.28□□□□□ -0.44
HDAC5-203ENST00000586339 HOXB1P14653 301 aaPredicted RBP12.28□□□□□ -0.44
HDAC5-203ENST00000586339 ETS2P15036 469 aa12.28□□□□□ -0.44
HDAC5-203ENST00000586339 HOXB9P17482 250 aaPredicted RBP12.28□□□□□ -0.44
HDAC5-203ENST00000586339 GTF2E2P29084 291 aaKnown RBP12.28□□□□□ -0.44
HDAC5-203ENST00000586339 STX1BP61266 288 aa12.28□□□□□ -0.44
HDAC5-203ENST00000586339 TMEM249Q2WGJ8 235 aa12.28□□□□□ -0.44
HDAC5-203ENST00000586339 TBRG1Q3YBR2 411 aa12.28□□□□□ -0.44
HDAC5-203ENST00000586339 ZNF311Q5JNZ3 666 aa12.28□□□□□ -0.44
HDAC5-203ENST00000586339 C6orf52Q5T4I8 152 aa12.28□□□□□ -0.44
HDAC5-203ENST00000586339 PODNL1Q6PEZ8 512 aa12.28□□□□□ -0.44
HDAC5-203ENST00000586339 HDXQ7Z353 690 aa12.28□□□□□ -0.44
HDAC5-203ENST00000586339 ZNF525Q8N782 197 aa12.28□□□□□ -0.44
HDAC5-203ENST00000586339 ANKK1Q8NFD2 765 aa12.28□□□□□ -0.44
HDAC5-203ENST00000586339 OR1K1Q8NGR3 316 aa12.28□□□□□ -0.44
HDAC5-203ENST00000586339 LRRC8CQ8TDW0 803 aa12.28□□□□□ -0.44
HDAC5-203ENST00000586339 FAM168AQ92567 244 aa12.28□□□□□ -0.44
HDAC5-203ENST00000586339 PROX1Q92786 737 aa12.28□□□□□ -0.44
HDAC5-203ENST00000586339 ALKBH3Q96Q83 286 aaPredicted RBP12.28□□□□□ -0.44
HDAC5-203ENST00000586339 SLC38A2Q96QD8 506 aa12.28□□□□□ -0.44
HDAC5-203ENST00000586339 KCNS3Q9BQ31 491 aa12.28□□□□□ -0.44
HDAC5-203ENST00000586339 KATNB1Q9BVA0 655 aa12.28□□□□□ -0.44
HDAC5-203ENST00000586339 PAIP1Q9H074 479 aaKnown RBP12.28□□□□□ -0.44
HDAC5-203ENST00000586339 PCDHB14Q9Y5E9 798 aa12.28□□□□□ -0.44
HDAC5-203ENST00000586339 C5orf58C9J3I9 102 aa12.27□□□□□ -0.45
HDAC5-203ENST00000586339 FTCDNL1E5RQL4 147 aa12.27□□□□□ -0.45
HDAC5-203ENST00000586339 OR2T1O43869 369 aa12.27□□□□□ -0.45
HDAC5-203ENST00000586339 PDE5AO76074 875 aa12.27□□□□□ -0.45
HDAC5-203ENST00000586339 PNMTP11086 282 aa12.27□□□□□ -0.45
HDAC5-203ENST00000586339 CDH2P19022 906 aaPredicted RBP12.27□□□□□ -0.45
HDAC5-203ENST00000586339 PRKAR1BP31321 381 aa12.27□□□□□ -0.45
HDAC5-203ENST00000586339 SELENOPP49908 381 aa12.27□□□□□ -0.45
HDAC5-203ENST00000586339 IDH3AP50213 366 aa12.27□□□□□ -0.45
HDAC5-203ENST00000586339 UBE2NP61088 152 aaKnown RBP12.27□□□□□ -0.45
HDAC5-203ENST00000586339 SWI5Q1ZZU3 235 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms