RNA–Protein interactions for RNA: ENST00000568507.5

CCNDBP1-213, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-213ENST00000568507 NIPAL3Q6P499 406 aa13.11□□□□□ -0.31
CCNDBP1-213ENST00000568507 BLOC1S3Q6QNY0 202 aa13.11□□□□□ -0.31
CCNDBP1-213ENST00000568507 CREB3L2Q70SY1 520 aa13.11□□□□□ -0.31
CCNDBP1-213ENST00000568507 KRT73Q86Y46 540 aa13.11□□□□□ -0.31
CCNDBP1-213ENST00000568507 ELOA3Q8NG57 546 aa13.11□□□□□ -0.31
CCNDBP1-213ENST00000568507 MFSD8Q8NHS3 518 aa13.11□□□□□ -0.31
CCNDBP1-213ENST00000568507 NFKBIDQ8NI38 313 aa13.11□□□□□ -0.31
CCNDBP1-213ENST00000568507 SPATA5L1Q9BVQ7 753 aa13.11□□□□□ -0.31
CCNDBP1-213ENST00000568507 SLCO1B3Q9NPD5 702 aa13.11□□□□□ -0.31
CCNDBP1-213ENST00000568507 HIVEP2P31629 2446 aa13.1□□□□□ -0.31
CCNDBP1-213ENST00000568507 EVPLLA8MZ36 301 aa13.1□□□□□ -0.31
CCNDBP1-213ENST00000568507 TMEM229AB2RXF0 380 aa13.1□□□□□ -0.31
CCNDBP1-213ENST00000568507 ZNF587BE7ETH6 402 aa13.1□□□□□ -0.31
CCNDBP1-213ENST00000568507 NPIPB7O75200 414 aa13.1□□□□□ -0.31
CCNDBP1-213ENST00000568507 BMP2P12643 396 aa13.1□□□□□ -0.31
CCNDBP1-213ENST00000568507 ETS2P15036 469 aa13.1□□□□□ -0.31
CCNDBP1-213ENST00000568507 PRKAR1BP31321 381 aa13.1□□□□□ -0.31
CCNDBP1-213ENST00000568507 NUDT6P53370 316 aa13.1□□□□□ -0.31
CCNDBP1-213ENST00000568507 IRX1P78414 480 aaPredicted RBP13.1□□□□□ -0.31
CCNDBP1-213ENST00000568507 CHRNB3Q05901 458 aa13.1□□□□□ -0.31
CCNDBP1-213ENST00000568507 HIKESHIQ53FT3 197 aa13.1□□□□□ -0.31
CCNDBP1-213ENST00000568507 LRIF1Q5T3J3 769 aa13.1□□□□□ -0.31
CCNDBP1-213ENST00000568507 REEP3Q6NUK4 255 aa13.1□□□□□ -0.31
CCNDBP1-213ENST00000568507 FUNDC1Q8IVP5 155 aa13.1□□□□□ -0.31
CCNDBP1-213ENST00000568507 EBF4Q9BQW3 602 aa13.1□□□□□ -0.31
CCNDBP1-213ENST00000568507 SELENONQ9NZV5 590 aa13.1□□□□□ -0.31
CCNDBP1-213ENST00000568507 OR2T1O43869 369 aa13.09□□□□□ -0.31
CCNDBP1-213ENST00000568507 LGI1O95970 557 aa13.09□□□□□ -0.31
CCNDBP1-213ENST00000568507 ZNF43P17038 809 aa13.09□□□□□ -0.31
CCNDBP1-213ENST00000568507 PAX7P23759 505 aa13.09□□□□□ -0.31
CCNDBP1-213ENST00000568507 RPS5P46782 204 aaKnown RBP13.09□□□□□ -0.31
CCNDBP1-213ENST00000568507 SELENOPP49908 381 aa13.09□□□□□ -0.31
CCNDBP1-213ENST00000568507 P2RY4P51582 365 aa13.09□□□□□ -0.31
CCNDBP1-213ENST00000568507 DSCR9P59020 149 aa13.09□□□□□ -0.31
CCNDBP1-213ENST00000568507 UBE2NP61088 152 aaKnown RBP13.09□□□□□ -0.31
CCNDBP1-213ENST00000568507 SLC25A3Q00325 362 aa13.09□□□□□ -0.31
CCNDBP1-213ENST00000568507 CDK6Q00534 326 aa13.09□□□□□ -0.31
CCNDBP1-213ENST00000568507 IL1RL1Q01638 556 aa13.09□□□□□ -0.31
CCNDBP1-213ENST00000568507 AGKQ53H12 422 aa13.09□□□□□ -0.31
CCNDBP1-213ENST00000568507 C11orf71Q6IPW1 123 aa13.09□□□□□ -0.31
CCNDBP1-213ENST00000568507 CLEC2AQ6UVW9 174 aa13.09□□□□□ -0.31
CCNDBP1-213ENST00000568507 B3GLCTQ6Y288 498 aa13.09□□□□□ -0.31
CCNDBP1-213ENST00000568507 EPHX4Q8IUS5 362 aa13.09□□□□□ -0.31
CCNDBP1-213ENST00000568507 KDM8Q8N371 416 aa13.09□□□□□ -0.31
CCNDBP1-213ENST00000568507 KTI12Q96EK9 354 aaPredicted RBP13.09□□□□□ -0.31
CCNDBP1-213ENST00000568507 ATP6V1G3Q96LB4 118 aa13.09□□□□□ -0.31
CCNDBP1-213ENST00000568507 KCNS3Q9BQ31 491 aa13.09□□□□□ -0.31
CCNDBP1-213ENST00000568507 C12orf10Q9HB07 376 aa13.09□□□□□ -0.31
CCNDBP1-213ENST00000568507 OBP2BQ9NPH6 170 aa13.09□□□□□ -0.31
CCNDBP1-213ENST00000568507 SLC25A37Q9NYZ2 338 aa13.09□□□□□ -0.31
CCNDBP1-213ENST00000568507 SLAMF8Q9P0V8 285 aa13.09□□□□□ -0.31
CCNDBP1-213ENST00000568507 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.09□□□□□ -0.31
CCNDBP1-213ENST00000568507 SLC13A4Q9UKG4 626 aa13.09□□□□□ -0.31
CCNDBP1-213ENST00000568507 CORO2BQ9UQ03 480 aa13.09□□□□□ -0.31
CCNDBP1-213ENST00000568507 PMF1-BGLAPU3KQ54 211 aa13.09□□□□□ -0.31
CCNDBP1-213ENST00000568507 FN1P02751 2386 aaKnown RBP13.09□□□□□ -0.31
CCNDBP1-213ENST00000568507 ZANQ9Y493 2812 aa13.09□□□□□ -0.31
CCNDBP1-213ENST00000568507 ARAFP10398 606 aa13.08□□□□□ -0.31
CCNDBP1-213ENST00000568507 PNMTP11086 282 aa13.08□□□□□ -0.31
CCNDBP1-213ENST00000568507 HOXB9P17482 250 aaPredicted RBP13.08□□□□□ -0.31
CCNDBP1-213ENST00000568507 SLC6A2P23975 617 aa13.08□□□□□ -0.31
CCNDBP1-213ENST00000568507 APOBEC3AP31941 199 aaPredicted RBP13.08□□□□□ -0.31
CCNDBP1-213ENST00000568507 NCALDP61601 193 aa13.08□□□□□ -0.31
CCNDBP1-213ENST00000568507 C1DQ13901 141 aaKnown RBP13.08□□□□□ -0.31
CCNDBP1-213ENST00000568507 SQLEQ14534 574 aa13.08□□□□□ -0.31
CCNDBP1-213ENST00000568507 PAGE3Q5JUK9 113 aa13.08□□□□□ -0.31
CCNDBP1-213ENST00000568507 HMBOX1Q6NT76 420 aa13.08□□□□□ -0.31
CCNDBP1-213ENST00000568507 C5orf46Q6UWT4 87 aa13.08□□□□□ -0.31
CCNDBP1-213ENST00000568507 DNM1P46Q6ZS02 220 aa13.08□□□□□ -0.31
CCNDBP1-213ENST00000568507 PRIMA1Q86XR5 153 aa13.08□□□□□ -0.31
CCNDBP1-213ENST00000568507 MSRB3Q8IXL7 192 aa13.08□□□□□ -0.31
CCNDBP1-213ENST00000568507 OR1K1Q8NGR3 316 aa13.08□□□□□ -0.31
CCNDBP1-213ENST00000568507 RNF217Q8TC41 542 aa13.08□□□□□ -0.31
CCNDBP1-213ENST00000568507 DNAJA4Q8WW22 397 aaPredicted RBP13.08□□□□□ -0.31
CCNDBP1-213ENST00000568507 SLC38A4Q969I6 547 aa13.08□□□□□ -0.31
CCNDBP1-213ENST00000568507 ZNF607Q96SK3 696 aa13.08□□□□□ -0.31
CCNDBP1-213ENST00000568507 CSPG4Q6UVK1 2322 aa13.08□□□□□ -0.32
CCNDBP1-213ENST00000568507 A0A1B0GWA3 101 aa13.07□□□□□ -0.32
CCNDBP1-213ENST00000568507 PRORSD1PA6NEY8 169 aa13.07□□□□□ -0.32
CCNDBP1-213ENST00000568507 FTCDNL1E5RQL4 147 aa13.07□□□□□ -0.32
CCNDBP1-213ENST00000568507 AIM2O14862 343 aa13.07□□□□□ -0.32
CCNDBP1-213ENST00000568507 SLC43A1O75387 559 aa13.07□□□□□ -0.32
CCNDBP1-213ENST00000568507 CRLF1O75462 422 aa13.07□□□□□ -0.32
CCNDBP1-213ENST00000568507 ATP4BP51164 291 aa13.07□□□□□ -0.32
CCNDBP1-213ENST00000568507 CLDN17P56750 224 aa13.07□□□□□ -0.32
CCNDBP1-213ENST00000568507 EGR4Q05215 589 aa13.07□□□□□ -0.32
CCNDBP1-213ENST00000568507 LGALS3BPQ08380 585 aa13.07□□□□□ -0.32
CCNDBP1-213ENST00000568507 SCARB2Q14108 478 aa13.07□□□□□ -0.32
CCNDBP1-213ENST00000568507 TBRG1Q3YBR2 411 aa13.07□□□□□ -0.32
CCNDBP1-213ENST00000568507 ULK3Q6PHR2 472 aa13.07□□□□□ -0.32
CCNDBP1-213ENST00000568507 DHRS4L2Q6PKH6 230 aa13.07□□□□□ -0.32
CCNDBP1-213ENST00000568507 NET1Q7Z628 596 aaPredicted RBP13.07□□□□□ -0.32
CCNDBP1-213ENST00000568507 LSMEM1Q8N8F7 131 aa13.07□□□□□ -0.32
CCNDBP1-213ENST00000568507 BHLHE22Q8NFJ8 381 aaPredicted RBP13.07□□□□□ -0.32
CCNDBP1-213ENST00000568507 TAAR8Q969N4 342 aa13.07□□□□□ -0.32
CCNDBP1-213ENST00000568507 BOD1Q96IK1 185 aa13.07□□□□□ -0.32
CCNDBP1-213ENST00000568507 OXGR1Q96P68 337 aa13.07□□□□□ -0.32
CCNDBP1-213ENST00000568507 SLC38A2Q96QD8 506 aa13.07□□□□□ -0.32
CCNDBP1-213ENST00000568507 PTDSS2Q9BVG9 487 aa13.07□□□□□ -0.32
CCNDBP1-213ENST00000568507 RABEP2Q9H5N1 569 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms