RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 TSPAN13O95857 204 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 IL6RP08887 468 aaPredicted RBP4.75□□□□□ -1.65
UBE4A-203ENST00000545354 CST2P09228 141 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 FBXO45P0C2W1 286 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 FUT1P19526 365 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 ELAVL4P26378 380 aaKnown RBP4.75□□□□□ -1.65
UBE4A-203ENST00000545354 RPA3P35244 121 aaPredicted RBP4.75□□□□□ -1.65
UBE4A-203ENST00000545354 SLC6A8P48029 635 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 ACLYP53396 1101 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 TBPL1P62380 186 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 PLAURQ03405 335 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 CAMK2GQ13555 558 aaPredicted RBP4.75□□□□□ -1.65
UBE4A-203ENST00000545354 GPNMBQ14956 572 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 SF3A2Q15428 464 aaKnown RBP4.75□□□□□ -1.65
UBE4A-203ENST00000545354 NSDHLQ15738 373 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 PLPPR5Q32ZL2 321 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 TMEM176BQ3YBM2 270 aaPredicted RBP4.75□□□□□ -1.65
UBE4A-203ENST00000545354 LGALSLQ3ZCW2 172 aaPredicted RBP4.75□□□□□ -1.65
UBE4A-203ENST00000545354 ZNF789Q5FWF6 425 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 SDHAF4Q5VUM1 108 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 SYPL2Q5VXT5 272 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 TBC1D3CQ6IPX1 549 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 ADAM5Q6NVV9 412 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 GSG1LQ6UXU4 331 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 HACD2Q6Y1H2 254 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 HIST2H3AQ71DI3 136 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 H1FNTQ75WM6 255 aaPredicted RBP4.75□□□□□ -1.65
UBE4A-203ENST00000545354 AQP12AQ8IXF9 295 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 KLHDC8BQ8IXV7 354 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 BOD1L2Q8IYS8 172 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 TBC1D3Q8IZP1 549 aaPredicted RBP4.75□□□□□ -1.65
UBE4A-203ENST00000545354 GJD3Q8N144 294 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 GTPBP8Q8N3Z3 284 aaPredicted RBP4.75□□□□□ -1.65
UBE4A-203ENST00000545354 CPXM2Q8N436 756 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 ZNF738Q8NE65 137 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 ZNF555Q8NEP9 628 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 OR5M3Q8NGP4 307 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 MRAPQ8TCY5 172 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 TMEM239Q8WW34 195 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 CNOT9Q92600 299 aaKnown RBP4.75□□□□□ -1.65
UBE4A-203ENST00000545354 NEIL1Q96FI4 390 aaPredicted RBP4.75□□□□□ -1.65
UBE4A-203ENST00000545354 P2RY11Q96G91 374 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 FAM84AQ96KN4 292 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 AMDHD1Q96NU7 426 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 ATG10Q9H0Y0 220 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 C20orf85Q9H1P6 137 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 P2RY12Q9H244 342 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 UBQLN3Q9H347 655 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 TUBB1Q9H4B7 451 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 WDCPQ9H6R7 721 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 SYNPO2LQ9H987 977 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 ADGRL4Q9HBW9 690 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 ISYNA1Q9NPH2 558 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 FGF21Q9NSA1 209 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 C2orf42Q9NWW7 574 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 ERVK13-1Q9NX77 482 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 LRIT1Q9P2V4 623 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 ZNF230Q9UIE0 474 aaPredicted RBP4.75□□□□□ -1.65
UBE4A-203ENST00000545354 ZNF391Q9UJN7 358 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 NIP7Q9Y221 180 aaKnown RBP eCLIP4.75□□□□□ -1.65
UBE4A-203ENST00000545354 FARSAQ9Y285 508 aaKnown RBP4.75□□□□□ -1.65
UBE4A-203ENST00000545354 KLK4Q9Y5K2 254 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 ASTN1O14525 1302 aa4.75□□□□□ -1.65
UBE4A-203ENST00000545354 EDC4Q6P2E9 1401 aaKnown RBP4.75□□□□□ -1.65
UBE4A-203ENST00000545354 MYH15Q9Y2K3 1946 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 IFT172Q9UG01 1749 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 NPEPPSL1A6NEC2 478 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 ANXA2P2A6NMY6 339 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 TOX4O94842 621 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 DKK1O94907 266 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 MPC2O95563 127 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 SLC25A27O95847 323 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 HLA-DQB1P01920 261 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 ITGB2P05107 769 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 CHRM2P08172 466 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 NID1P14543 1247 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 AKR1C4P17516 323 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 GZMHP20718 246 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 CXCR1P25024 350 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 MPZP25189 248 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 ITPKBP27987 946 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 PSMB5P28074 263 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 HOXC9P31274 260 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 CTSCP53634 463 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 MFAP4P55083 255 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 TPI1P60174 286 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 RAB1AP62820 205 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 CDK6Q00534 326 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 ZNF460Q14592 562 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 CCDC85BQ15834 202 aaPredicted RBP4.74□□□□□ -1.65
UBE4A-203ENST00000545354 IQCJQ1A5X6 159 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 PLEKHN1Q494U1 663 aaPredicted RBP4.74□□□□□ -1.65
UBE4A-203ENST00000545354 RABL3Q5HYI8 236 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 IDNKQ5T6J7 187 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 ZNF620Q6ZNG0 422 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 C15orf39Q6ZRI6 1047 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 Q6ZVU0 165 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 TRMT1LQ7Z2T5 733 aaKnown RBP4.74□□□□□ -1.65
UBE4A-203ENST00000545354 TRIM48Q8IWZ4 208 aa4.74□□□□□ -1.65
UBE4A-203ENST00000545354 ADGRF3Q8IZF5 1079 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms