RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 PDK3Q15120 406 aa9.78□□□□□ -0.84
DDB1-222ENST00000543627 NRF1Q16656 503 aa9.78□□□□□ -0.84
DDB1-222ENST00000543627 FBXW9Q5XUX1 488 aa9.78□□□□□ -0.84
DDB1-222ENST00000543627 FAM91A1Q658Y4 838 aa9.78□□□□□ -0.84
DDB1-222ENST00000543627 NIPAL3Q6P499 406 aa9.78□□□□□ -0.84
DDB1-222ENST00000543627 PIGWQ7Z7B1 504 aa9.78□□□□□ -0.84
DDB1-222ENST00000543627 GABRG1Q8N1C3 465 aa9.78□□□□□ -0.84
DDB1-222ENST00000543627 ZNF417Q8TAU3 575 aa9.78□□□□□ -0.84
DDB1-222ENST00000543627 ADAMTS16Q8TE57 1224 aa9.78□□□□□ -0.84
DDB1-222ENST00000543627 LZICQ8WZA0 190 aa9.78□□□□□ -0.84
DDB1-222ENST00000543627 SLC41A3Q96GZ6 507 aa9.78□□□□□ -0.84
DDB1-222ENST00000543627 ZNF385AQ96PM9 386 aaKnown RBP9.78□□□□□ -0.84
DDB1-222ENST00000543627 ZNF587Q96SQ5 575 aaPredicted RBP9.78□□□□□ -0.84
DDB1-222ENST00000543627 ASPNQ9BXN1 380 aa9.78□□□□□ -0.84
DDB1-222ENST00000543627 ALG2Q9H553 416 aa9.78□□□□□ -0.84
DDB1-222ENST00000543627 EVA1AQ9H8M9 152 aa9.78□□□□□ -0.84
DDB1-222ENST00000543627 UBTD1Q9HAC8 227 aa9.78□□□□□ -0.84
DDB1-222ENST00000543627 ARL8BQ9NVJ2 186 aa9.78□□□□□ -0.84
DDB1-222ENST00000543627 PLEKHA6Q9Y2H5 1048 aa9.78□□□□□ -0.84
DDB1-222ENST00000543627 FLVCR1Q9Y5Y0 555 aa9.78□□□□□ -0.84
DDB1-222ENST00000543627 FBN2P35556 2912 aa9.78□□□□□ -0.84
DDB1-222ENST00000543627 ABCA12Q86UK0 2595 aa9.77□□□□□ -0.84
DDB1-222ENST00000543627 IGKV1D-42A0A075B6H8 117 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 IGKV3D-15A0A087WSY6 115 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 TRAPPC13A5PLN9 417 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 C11orf98E9PRG8 122 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 NPIPB7O75200 414 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 OR6A2O95222 327 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 CH25HO95992 272 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 SERPINA1P01009 418 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 HRGP04196 525 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 HIST1H2ABP04908 130 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 THBDP07204 575 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 PPP3CBP16298 524 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 PSMB1P20618 241 aaKnown RBP9.77□□□□□ -0.85
DDB1-222ENST00000543627 IGHV1-2P23083 117 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 PRDX6P30041 224 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 CRYBA2P53672 197 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 CLDN17P56750 224 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 SELENOWP63302 87 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 SLC25A3Q00325 362 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 PIN1Q13526 163 aaPredicted RBP9.77□□□□□ -0.85
DDB1-222ENST00000543627 FAM69AQ5T7M9 428 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 TSPO2Q5TGU0 170 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 GKAP1Q5VSY0 366 aaPredicted RBP9.77□□□□□ -0.85
DDB1-222ENST00000543627 CARD17Q5XLA6 110 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 ZNF613Q6PF04 617 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 Q6ZT83 130 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 H1FNTQ75WM6 255 aaPredicted RBP9.77□□□□□ -0.85
DDB1-222ENST00000543627 HIST3H2AQ7L7L0 130 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 FAM156AQ8NDB6 213 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 OR52N5Q8NH56 324 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 HIST1H2ACQ93077 130 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 MUCL1Q96DR8 90 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 PLPPR2Q96GM1 343 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 PTDSS2Q9BVG9 487 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 C1QTNF6Q9BXI9 259 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 C12orf10Q9HB07 376 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 ASB6Q9NWX5 421 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 RHCGQ9UBD6 479 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 TAGLN3Q9UI15 199 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 PRDM4Q9UKN5 801 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 RASD1Q9Y272 281 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 V9GYQ6 96 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 APCP25054 2843 aa9.77□□□□□ -0.85
DDB1-222ENST00000543627 NDUFAB1O14561 156 aa9.76□□□□□ -0.85
DDB1-222ENST00000543627 CLOCKO15516 846 aa9.76□□□□□ -0.85
DDB1-222ENST00000543627 CHP2O43745 196 aa9.76□□□□□ -0.85
DDB1-222ENST00000543627 VAMP5O95183 116 aa9.76□□□□□ -0.85
DDB1-222ENST00000543627 GGT1P19440 569 aa9.76□□□□□ -0.85
DDB1-222ENST00000543627 CRYGSP22914 178 aa9.76□□□□□ -0.85
DDB1-222ENST00000543627 IFNA8P32881 189 aa9.76□□□□□ -0.85
DDB1-222ENST00000543627 MSX2P35548 267 aaPredicted RBP9.76□□□□□ -0.85
DDB1-222ENST00000543627 SELENOPP49908 381 aa9.76□□□□□ -0.85
DDB1-222ENST00000543627 SLC16A1P53985 500 aa9.76□□□□□ -0.85
DDB1-222ENST00000543627 FOXG1P55316 489 aaPredicted RBP9.76□□□□□ -0.85
DDB1-222ENST00000543627 LTBQ06643 244 aa9.76□□□□□ -0.85
DDB1-222ENST00000543627 LGALS3BPQ08380 585 aa9.76□□□□□ -0.85
DDB1-222ENST00000543627 KEAP1Q14145 624 aa9.76□□□□□ -0.85
DDB1-222ENST00000543627 P2RY6Q15077 328 aa9.76□□□□□ -0.85
DDB1-222ENST00000543627 TAB1Q15750 504 aa9.76□□□□□ -0.85
DDB1-222ENST00000543627 GLYATQ6IB77 296 aa9.76□□□□□ -0.85
DDB1-222ENST00000543627 C5orf46Q6UWT4 87 aa9.76□□□□□ -0.85
DDB1-222ENST00000543627 C6orf89Q6UWU4 347 aa9.76□□□□□ -0.85
DDB1-222ENST00000543627 HACD2Q6Y1H2 254 aa9.76□□□□□ -0.85
DDB1-222ENST00000543627 CREB3L2Q70SY1 520 aa9.76□□□□□ -0.85
DDB1-222ENST00000543627 VTCN1Q7Z7D3 282 aa9.76□□□□□ -0.85
DDB1-222ENST00000543627 ZIC4Q8N9L1 334 aa9.76□□□□□ -0.85
DDB1-222ENST00000543627 CCDC197Q8NCU1 140 aa9.76□□□□□ -0.85
DDB1-222ENST00000543627 OXGR1Q96P68 337 aa9.76□□□□□ -0.85
DDB1-222ENST00000543627 MOGAT1Q96PD6 335 aa9.76□□□□□ -0.85
DDB1-222ENST00000543627 SF3B5Q9BWJ5 86 aaKnown RBP9.76□□□□□ -0.85
DDB1-222ENST00000543627 SPAG4Q9NPE6 437 aa9.76□□□□□ -0.85
DDB1-222ENST00000543627 SLC7A10Q9NS82 523 aa9.76□□□□□ -0.85
DDB1-222ENST00000543627 CCM2LQ9NUG4 571 aaPredicted RBP9.76□□□□□ -0.85
DDB1-222ENST00000543627 RIMS3Q9UJD0 308 aa9.76□□□□□ -0.85
DDB1-222ENST00000543627 TACC2O95359 2948 aa9.76□□□□□ -0.85
DDB1-222ENST00000543627 TEX15Q9BXT5 2789 aa9.76□□□□□ -0.85
DDB1-222ENST00000543627 FREM1Q5H8C1 2179 aa9.75□□□□□ -0.85
DDB1-222ENST00000543627 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 160.9 ms