RNA–Protein interactions for RNA: ENST00000539890.1

CYB561A3-213, Transcript of cytochrome b561 family member A3, humanhuman

TSL 4 BASIC

Gene CYB561A3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-213ENST00000539890 C14orf79Q96F83 325 aa11.13□□□□□ -0.63
CYB561A3-213ENST00000539890 ZC3HAV1LQ96H79 300 aaKnown RBP11.13□□□□□ -0.63
CYB561A3-213ENST00000539890 HSH2DQ96JZ2 352 aa11.13□□□□□ -0.63
CYB561A3-213ENST00000539890 NSMCE2Q96MF7 247 aa11.13□□□□□ -0.63
CYB561A3-213ENST00000539890 HS6ST2Q96MM7 605 aa11.13□□□□□ -0.63
CYB561A3-213ENST00000539890 DACH2Q96NX9 599 aa11.13□□□□□ -0.63
CYB561A3-213ENST00000539890 PCDHAC1Q9H158 963 aa11.13□□□□□ -0.63
CYB561A3-213ENST00000539890 B3GALT5Q9Y2C3 310 aa11.13□□□□□ -0.63
CYB561A3-213ENST00000539890 GPR52Q9Y2T5 361 aa11.13□□□□□ -0.63
CYB561A3-213ENST00000539890 KIAA1549Q9HCM3 1950 aa11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 CIB4A0PJX0 185 aa11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 ZNF716A6NP11 495 aa11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 M0R082 166 aa11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 AKAP8O43823 692 aaKnown RBP11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 NPIPB7O75200 414 aa11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 CH25HO95992 272 aa11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 HSD17B1P14061 328 aa11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 ITGA2P17301 1181 aa11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 MSX2P35548 267 aaPredicted RBP11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 YAP1P46937 504 aaKnown RBP11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 PCYT1AP49585 367 aa11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 CRYBA2P53672 197 aa11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 SLC16A1P53985 500 aa11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 SLC17A1Q14916 467 aa11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 FBXW9Q5XUX1 488 aa11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 TFAP2EQ6VUC0 442 aa11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 ABHD12BQ7Z5M8 362 aaPredicted RBP11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 VTCN1Q7Z7D3 282 aa11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 CXorf67Q86X51 503 aaPredicted RBP11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 UEVLDQ8IX04 471 aa11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 RBM15BQ8NDT2 890 aaKnown RBP11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 OR6S1Q8NH40 331 aa11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 ZNF417Q8TAU3 575 aa11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 OXGR1Q96P68 337 aa11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 ZNF587Q96SQ5 575 aaPredicted RBP11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 USB1Q9BQ65 265 aaKnown RBP11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 SLC19A3Q9BZV2 496 aa11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 GORASP2Q9H8Y8 452 aa11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 NANSQ9NR45 359 aa11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 ASB6Q9NWX5 421 aa11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 EDARQ9UNE0 448 aa11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 MED31Q9Y3C7 131 aa11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 SNX13Q9Y5W8 968 aa11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 FLVCR1Q9Y5Y0 555 aa11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 DOCK7Q96N67 2140 aa11.12□□□□□ -0.63
CYB561A3-213ENST00000539890 IGKV1D-42A0A075B6H8 117 aa11.11□□□□□ -0.63
CYB561A3-213ENST00000539890 OR6C65A6NJZ3 312 aa11.11□□□□□ -0.63
CYB561A3-213ENST00000539890 ZNF726A6NNF4 738 aa11.11□□□□□ -0.63
CYB561A3-213ENST00000539890 ZNF814B7Z6K7 855 aa11.11□□□□□ -0.63
CYB561A3-213ENST00000539890 GYG2O15488 501 aa11.11□□□□□ -0.63
CYB561A3-213ENST00000539890 RAMP1O60894 148 aa11.11□□□□□ -0.63
CYB561A3-213ENST00000539890 CNOT4O95628 575 aaKnown RBP11.11□□□□□ -0.63
CYB561A3-213ENST00000539890 IGHV3-9P01782 118 aa11.11□□□□□ -0.63
CYB561A3-213ENST00000539890 RBM34P42696 430 aaKnown RBP11.11□□□□□ -0.63
CYB561A3-213ENST00000539890 TGFBR3Q03167 851 aa11.11□□□□□ -0.63
CYB561A3-213ENST00000539890 FAPQ12884 760 aa11.11□□□□□ -0.63
CYB561A3-213ENST00000539890 ITGADQ13349 1161 aa11.11□□□□□ -0.63
CYB561A3-213ENST00000539890 TRAM2Q15035 370 aa11.11□□□□□ -0.63
CYB561A3-213ENST00000539890 LINC00114Q6XXX2 140 aa11.11□□□□□ -0.63
CYB561A3-213ENST00000539890 RINLQ6ZS11 566 aa11.11□□□□□ -0.63
CYB561A3-213ENST00000539890 Q6ZT83 130 aa11.11□□□□□ -0.63
CYB561A3-213ENST00000539890 KDM8Q8N371 416 aa11.11□□□□□ -0.63
CYB561A3-213ENST00000539890 SCAIQ8N9R8 606 aa11.11□□□□□ -0.63
CYB561A3-213ENST00000539890 TMEM239Q8WW34 195 aa11.11□□□□□ -0.63
CYB561A3-213ENST00000539890 MUCL1Q96DR8 90 aa11.11□□□□□ -0.63
CYB561A3-213ENST00000539890 PRRC1Q96M27 445 aa11.11□□□□□ -0.63
CYB561A3-213ENST00000539890 LRGUKQ96M69 825 aa11.11□□□□□ -0.63
CYB561A3-213ENST00000539890 WFIKKN1Q96NZ8 548 aa11.11□□□□□ -0.63
CYB561A3-213ENST00000539890 PTDSS2Q9BVG9 487 aa11.11□□□□□ -0.63
CYB561A3-213ENST00000539890 AMBRA1Q9C0C7 1298 aa11.11□□□□□ -0.63
CYB561A3-213ENST00000539890 ACTR6Q9GZN1 396 aa11.11□□□□□ -0.63
CYB561A3-213ENST00000539890 NGBQ9NPG2 151 aa11.11□□□□□ -0.63
CYB561A3-213ENST00000539890 DCAF13Q9NV06 445 aaKnown RBP11.11□□□□□ -0.63
CYB561A3-213ENST00000539890 PRSS50Q9UI38 385 aa11.11□□□□□ -0.63
CYB561A3-213ENST00000539890 V9GYQ6 96 aa11.11□□□□□ -0.63
CYB561A3-213ENST00000539890 SPTBN1Q01082 2364 aaKnown RBP11.11□□□□□ -0.63
CYB561A3-213ENST00000539890 USP9YO00507 2555 aaPredicted RBP11.11□□□□□ -0.63
CYB561A3-213ENST00000539890 FTCDNL1E5RQL4 147 aa11.1□□□□□ -0.63
CYB561A3-213ENST00000539890 RNF13O43567 381 aa11.1□□□□□ -0.63
CYB561A3-213ENST00000539890 SERPINI2O75830 405 aa11.1□□□□□ -0.63
CYB561A3-213ENST00000539890 ADORA3P0DMS8 318 aa11.1□□□□□ -0.63
CYB561A3-213ENST00000539890 HOXC12P31275 282 aa11.1□□□□□ -0.63
CYB561A3-213ENST00000539890 DNAJA1P31689 397 aaKnown RBP11.1□□□□□ -0.63
CYB561A3-213ENST00000539890 RASSF2P50749 326 aa11.1□□□□□ -0.63
CYB561A3-213ENST00000539890 CLDN17P56750 224 aa11.1□□□□□ -0.63
CYB561A3-213ENST00000539890 STK11Q15831 433 aa11.1□□□□□ -0.63
CYB561A3-213ENST00000539890 DNAL1Q4LDG9 190 aa11.1□□□□□ -0.63
CYB561A3-213ENST00000539890 SFRP5Q5T4F7 317 aa11.1□□□□□ -0.63
CYB561A3-213ENST00000539890 NIPAL3Q6P499 406 aa11.1□□□□□ -0.63
CYB561A3-213ENST00000539890 STAC2Q6ZMT1 411 aa11.1□□□□□ -0.63
CYB561A3-213ENST00000539890 ZNF730Q6ZMV8 503 aa11.1□□□□□ -0.63
CYB561A3-213ENST00000539890 CREB3L2Q70SY1 520 aa11.1□□□□□ -0.63
CYB561A3-213ENST00000539890 BHLHA15Q7RTS1 189 aaPredicted RBP11.1□□□□□ -0.63
CYB561A3-213ENST00000539890 ZNF295-AS1Q8N0V1 137 aa11.1□□□□□ -0.63
CYB561A3-213ENST00000539890 POMGNT2Q8NAT1 580 aa11.1□□□□□ -0.63
CYB561A3-213ENST00000539890 ACBD4Q8NC06 268 aa11.1□□□□□ -0.63
CYB561A3-213ENST00000539890 OR5J2Q8NH18 312 aa11.1□□□□□ -0.63
CYB561A3-213ENST00000539890 TMEM45BQ96B21 275 aa11.1□□□□□ -0.63
CYB561A3-213ENST00000539890 SGTBQ96EQ0 304 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms