RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, human

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX41-215	ENST00000512431	LYPLA1	O75608	230 aa	Predicted RBP	10.8	□□□□□ -0.68
DDX41-215	ENST00000512431	PRSS23	O95084	383 aa		10.8	□□□□□ -0.68
DDX41-215	ENST00000512431	VAMP5	O95183	116 aa		10.8	□□□□□ -0.68
DDX41-215	ENST00000512431	UQCRB	P14927	111 aa		10.8	□□□□□ -0.68
DDX41-215	ENST00000512431	ADRA2C	P18825	462 aa		10.8	□□□□□ -0.68
DDX41-215	ENST00000512431	GATA3	P23771	443 aa		10.8	□□□□□ -0.68
DDX41-215	ENST00000512431	TACR3	P29371	465 aa		10.8	□□□□□ -0.68
DDX41-215	ENST00000512431	CAPZA2	P47755	286 aa		10.8	□□□□□ -0.68
DDX41-215	ENST00000512431	IL13RA1	P78552	427 aa		10.8	□□□□□ -0.68
DDX41-215	ENST00000512431	MRPS11	P82912	194 aa	Known RBP	10.8	□□□□□ -0.68
DDX41-215	ENST00000512431	ROR2	Q01974	943 aa	Known RBP	10.8	□□□□□ -0.68
DDX41-215	ENST00000512431	MAPK14	Q16539	360 aa		10.8	□□□□□ -0.68
DDX41-215	ENST00000512431	C8orf74	Q6P047	294 aa		10.8	□□□□□ -0.68
DDX41-215	ENST00000512431	CREB3L2	Q70SY1	520 aa		10.8	□□□□□ -0.68
DDX41-215	ENST00000512431	OLIG3	Q7RTU3	272 aa		10.8	□□□□□ -0.68
DDX41-215	ENST00000512431	C6orf120	Q7Z4R8	191 aa		10.8	□□□□□ -0.68
DDX41-215	ENST00000512431	DDIAS	Q8IXT1	998 aa		10.8	□□□□□ -0.68
DDX41-215	ENST00000512431	CCDC36	Q8IYA8	594 aa		10.8	□□□□□ -0.68
DDX41-215	ENST00000512431	SLC35G5	Q96KT7	338 aa		10.8	□□□□□ -0.68
DDX41-215	ENST00000512431	MRPL37	Q9BZE1	423 aa	Known RBP	10.8	□□□□□ -0.68
DDX41-215	ENST00000512431	LINC00470	Q9BZP3	86 aa		10.8	□□□□□ -0.68
DDX41-215	ENST00000512431	ZNF665	Q9H7R5	613 aa		10.8	□□□□□ -0.68
DDX41-215	ENST00000512431	ZMAT3	Q9HA38	289 aa	Known RBP	10.8	□□□□□ -0.68
DDX41-215	ENST00000512431	NOX3	Q9HBY0	568 aa		10.8	□□□□□ -0.68
DDX41-215	ENST00000512431	POLE3	Q9NRF9	147 aa		10.8	□□□□□ -0.68
DDX41-215	ENST00000512431		G3V2L1	256 aa		10.79	□□□□□ -0.68
DDX41-215	ENST00000512431	UPK3A	O75631	287 aa		10.79	□□□□□ -0.68
DDX41-215	ENST00000512431	GUSB	P08236	651 aa		10.79	□□□□□ -0.68
DDX41-215	ENST00000512431	NR4A1	P22736	598 aa		10.79	□□□□□ -0.68
DDX41-215	ENST00000512431	PRTN3	P24158	256 aa		10.79	□□□□□ -0.68
DDX41-215	ENST00000512431	CXCR1	P25024	350 aa		10.79	□□□□□ -0.68
DDX41-215	ENST00000512431	ZFP36	P26651	326 aa	Known RBP	10.79	□□□□□ -0.68
DDX41-215	ENST00000512431	DNAJB13	P59910	316 aa		10.79	□□□□□ -0.68
DDX41-215	ENST00000512431	ETF1	P62495	437 aa	Known RBP	10.79	□□□□□ -0.68
DDX41-215	ENST00000512431	HPCA	P84074	193 aa		10.79	□□□□□ -0.68
DDX41-215	ENST00000512431	ARF1	P84077	181 aa	Known RBP	10.79	□□□□□ -0.68
DDX41-215	ENST00000512431	ZP4	Q12836	540 aa		10.79	□□□□□ -0.68
DDX41-215	ENST00000512431	GKAP1	Q5VSY0	366 aa	Predicted RBP	10.79	□□□□□ -0.68
DDX41-215	ENST00000512431	TYW3	Q6IPR3	259 aa	Known RBP	10.79	□□□□□ -0.68
DDX41-215	ENST00000512431	RNF165	Q6ZSG1	346 aa		10.79	□□□□□ -0.68
DDX41-215	ENST00000512431	MYPOP	Q86VE0	399 aa	Predicted RBP	10.79	□□□□□ -0.68
DDX41-215	ENST00000512431	XAGE5	Q8WWM1	108 aa		10.79	□□□□□ -0.68
DDX41-215	ENST00000512431	C22orf15	Q8WYQ4	148 aa		10.79	□□□□□ -0.68
DDX41-215	ENST00000512431	COQ8B	Q96D53	544 aa		10.79	□□□□□ -0.68
DDX41-215	ENST00000512431	PPP3R2	Q96LZ3	170 aa		10.79	□□□□□ -0.68
DDX41-215	ENST00000512431	SYT3	Q9BQG1	590 aa		10.79	□□□□□ -0.68
DDX41-215	ENST00000512431	OR51I1	Q9H343	314 aa		10.79	□□□□□ -0.68
DDX41-215	ENST00000512431	C7orf69	Q9H7B7	122 aa		10.79	□□□□□ -0.68
DDX41-215	ENST00000512431	ADPRHL2	Q9NX46	363 aa		10.79	□□□□□ -0.68
DDX41-215	ENST00000512431	ARMCX1	Q9P291	453 aa		10.79	□□□□□ -0.68
DDX41-215	ENST00000512431	ZC3H12D	A2A288	527 aa	Known RBP	10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	LIPT2	A6NK58	231 aa		10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	GLRA3	O75311	464 aa		10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	BCAS1	O75363	584 aa	Predicted RBP	10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	GLRX	P35754	106 aa		10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	ALDH3B1	P43353	468 aa		10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	SEC24C	P53992	1094 aa		10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	RPS23	P62266	143 aa	Known RBP	10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	HBA1	P69905	142 aa		10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	GALK2	Q01415	458 aa		10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	MVK	Q03426	396 aa		10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	OCLN	Q16625	522 aa		10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	TRMT5	Q32P41	509 aa	Known RBP	10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	AP1AR	Q63HQ0	302 aa		10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	LINGO2	Q7L985	606 aa		10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	MDP1	Q86V88	176 aa		10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	CNPY4	Q8N129	248 aa		10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	CCDC63	Q8NA47	563 aa		10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	ANKK1	Q8NFD2	765 aa		10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	RNF217	Q8TC41	542 aa		10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	MGARP	Q8TDB4	240 aa		10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	YIPF5	Q969M3	257 aa		10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	ROPN1L	Q96C74	230 aa		10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	FMO2	Q99518	471 aa		10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	GPA33	Q99795	319 aa		10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	DUSP26	Q9BV47	211 aa		10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	SLITRK2	Q9H156	845 aa		10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	NELFA	Q9H3P2	528 aa		10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	TUBB1	Q9H4B7	451 aa		10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	ZNF385D	Q9H6B1	395 aa		10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	GPR160	Q9UJ42	338 aa		10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	ZNF346	Q9UL40	294 aa	Known RBP	10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	RASD1	Q9Y272	281 aa		10.78	□□□□□ -0.68
DDX41-215	ENST00000512431	RNF103-CHMP3	A0A140T963	221 aa		10.77	□□□□□ -0.69
DDX41-215	ENST00000512431		A0A1W2PPW3	197 aa		10.77	□□□□□ -0.69
DDX41-215	ENST00000512431	TMEM229A	B2RXF0	380 aa		10.77	□□□□□ -0.69
DDX41-215	ENST00000512431	RPL36A-HNRNPH2	H7BZ11	118 aa		10.77	□□□□□ -0.69
DDX41-215	ENST00000512431	AP3D1	O14617	1153 aa		10.77	□□□□□ -0.69
DDX41-215	ENST00000512431	ZNF432	O94892	652 aa		10.77	□□□□□ -0.69
DDX41-215	ENST00000512431	CHRM4	P08173	479 aa		10.77	□□□□□ -0.69
DDX41-215	ENST00000512431	NUDT17	P0C025	328 aa		10.77	□□□□□ -0.69
DDX41-215	ENST00000512431	OR12D1	P0DN82	309 aa		10.77	□□□□□ -0.69
DDX41-215	ENST00000512431	PRPS1L1	P21108	318 aa		10.77	□□□□□ -0.69
DDX41-215	ENST00000512431	RAD52	P43351	418 aa		10.77	□□□□□ -0.69
DDX41-215	ENST00000512431	GNA13	Q14344	377 aa		10.77	□□□□□ -0.69
DDX41-215	ENST00000512431	PTGR1	Q14914	329 aa		10.77	□□□□□ -0.69
DDX41-215	ENST00000512431	GSTA3	Q16772	222 aa		10.77	□□□□□ -0.69
DDX41-215	ENST00000512431	CCDC153	Q494R4	210 aa		10.77	□□□□□ -0.69
DDX41-215	ENST00000512431	MMEL1	Q495T6	779 aa		10.77	□□□□□ -0.69
DDX41-215	ENST00000512431	GLIPR1L2	Q4G1C9	344 aa		10.77	□□□□□ -0.69

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