RNA–Protein interactions for RNA: ENST00000497380.1

USP13-205, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 3

Gene USP13, Length 509 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-205ENST00000497380 NPIPA2E9PIF3 369 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 NPIPA3F8WFD2 350 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 BLOC1S5-TXNDC5H3BN57 136 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 H3BN98 237 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 SOCS2O14508 198 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 TNFSF11O14788 317 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 KLF4O43474 513 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 FZD7O75084 574 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 NDUFB2O95178 105 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 WISP1O95388 367 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 OPN1LWP04000 364 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 ASAH2BP0C7U1 165 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 IMPDH2P12268 514 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 OSMP13725 252 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 EDN3P14138 238 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 ABOP16442 354 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 ZNF26P17031 533 aaPredicted RBP9.4□□□□□ -0.9
USP13-205ENST00000497380 MAKP20794 623 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 PTNP21246 168 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 FUT4P22083 530 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 ENPP1P22413 925 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 PEX2P28328 305 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 GRPRP30550 384 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 HSPA13P48723 471 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 CLDN20P56880 219 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 ESRRGP62508 458 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 SRYQ05066 204 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 C1QL3Q5VWW1 255 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 TMEM225Q6GV28 225 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 PAQR6Q6TCH4 344 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 PCSK4Q6UW60 755 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 GFRALQ6UXV0 394 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 SLC46A3Q7Z3Q1 461 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 GGNQ86UU5 652 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 EPHX4Q8IUS5 362 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 GALNT4Q8N4A0 578 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 PIP4P2Q8N4L2 257 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 OR10D3Q8NH80 312 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 ZPLD1Q8TCW7 415 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 ADGRG7Q96K78 797 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 BARD1Q99728 777 aaKnown RBP9.4□□□□□ -0.9
USP13-205ENST00000497380 NIPSNAP1Q9BPW8 284 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 SMURF2Q9HAU4 748 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 CHST11Q9NPF2 352 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 ASF1BQ9NVP2 202 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 SMPD3Q9NY59 655 aaPredicted RBP9.4□□□□□ -0.9
USP13-205ENST00000497380 IL20Q9NYY1 176 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 SPRR3Q9UBC9 169 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 CAMK2AQ9UQM7 478 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 RASD1Q9Y272 281 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 SIGLEC7Q9Y286 467 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 HIF3AQ9Y2N7 669 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 MAGED1Q9Y5V3 778 aaPredicted RBP9.4□□□□□ -0.9
USP13-205ENST00000497380 MGAQ8IWI9 3026 aa9.4□□□□□ -0.9
USP13-205ENST00000497380 FREM3P0C091 2139 aa9.4□□□□□ -0.91
USP13-205ENST00000497380 NCKAP5O14513 1909 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 AQP7P3A6NL99 342 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 FIGNL2A6NMB9 653 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 M0R082 166 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 CDC42EP2O14613 210 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 PRRG2O14669 202 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 CXCL13O43927 109 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 WDR1O75083 606 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 C1QL1O75973 258 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 PRB1P04280 392 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 ADORA3P0DMS8 318 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 FCGR2AP12318 317 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 SHC1P29353 583 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 SLC6A6P31641 620 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 AGFG1P52594 562 aaKnown RBP9.39□□□□□ -0.91
USP13-205ENST00000497380 SUCLG1P53597 346 aaKnown RBP9.39□□□□□ -0.91
USP13-205ENST00000497380 LSM11P83369 360 aaKnown RBP eCLIP9.39□□□□□ -0.91
USP13-205ENST00000497380 PUDPQ08623 228 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 ZP4Q12836 540 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 NFATC3Q12968 1075 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 ZNF239Q16600 458 aaKnown RBP9.39□□□□□ -0.91
USP13-205ENST00000497380 CTU2Q2VPK5 515 aaKnown RBP9.39□□□□□ -0.91
USP13-205ENST00000497380 GXYLT1Q4G148 440 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 SMARCD3Q6STE5 483 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 KLHL17Q6TDP4 642 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 MCEMP1Q8IX19 187 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 ZNF555Q8NEP9 628 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 OR51A7Q8NH64 312 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 ZNF417Q8TAU3 575 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 TEX47Q8TBZ9 253 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 CPT1CQ8TCG5 803 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 MOGAT1Q96PD6 335 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 TNFRSF13CQ96RJ3 184 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 ZNF587Q96SQ5 575 aaPredicted RBP9.39□□□□□ -0.91
USP13-205ENST00000497380 SLC29A1Q99808 456 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 SF3B5Q9BWJ5 86 aaKnown RBP9.39□□□□□ -0.91
USP13-205ENST00000497380 PRRG3Q9BZD7 231 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 BAIAP2Q9UQB8 552 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 ZNF175Q9Y473 711 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 CDH10Q9Y6N8 788 aa9.39□□□□□ -0.91
USP13-205ENST00000497380 LOC102725191A0A1B0GVB3 256 aa9.38□□□□□ -0.91
USP13-205ENST00000497380 LRRN3E7EW58 273 aa9.38□□□□□ -0.91
USP13-205ENST00000497380 J3QKU1 62 aa9.38□□□□□ -0.91
USP13-205ENST00000497380 PLPP3O14495 311 aa9.38□□□□□ -0.91
USP13-205ENST00000497380 GPR171O14626 319 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms