RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	ST13	P50502	369 aa	Known RBP	4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	ZNF133	P52736	654 aa	Predicted RBP	4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	CDH12	P55289	794 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	PRPS1	P60891	318 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	SLC25A3	Q00325	362 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	ZNF74	Q16587	644 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	NDUFAF6	Q330K2	333 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	GLIPR1L2	Q4G1C9	344 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	TMEM201	Q5SNT2	666 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	OR7E24	Q6IFN5	339 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	RPL13AP3	Q6NVV1	102 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	TTC33	Q6PID6	262 aa	Predicted RBP	4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	CD300LD	Q6UXZ3	194 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	TFAP2E	Q6VUC0	442 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	H1FNT	Q75WM6	255 aa	Predicted RBP	4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	ASRGL1	Q7L266	308 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	DPPA2	Q7Z7J5	298 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	GALNT5	Q7Z7M9	940 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	COMTD1	Q86VU5	262 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	CARM1	Q86X55	608 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	DHFR2	Q86XF0	187 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	DMRTC2	Q8IXT2	367 aa	Predicted RBP	4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	CCDC36	Q8IYA8	594 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	GABRG1	Q8N1C3	465 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	CLDN22	Q8N7P3	220 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	RELL2	Q8NC24	303 aa	Predicted RBP	4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	NAXE	Q8NCW5	288 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	OR5J2	Q8NH18	312 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	MAGEE2	Q8TD90	523 aa	Predicted RBP	4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	FAM222B	Q8WU58	562 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	DNAJC9	Q8WXX5	260 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	SDCCAG3	Q96C92	435 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	STARD4	Q96DR4	205 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	NRBF2	Q96F24	287 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	HSH2D	Q96JZ2	352 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	ARL5B	Q96KC2	179 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	DACH2	Q96NX9	599 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	OXGR1	Q96P68	337 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	OR5B2	Q96R09	309 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	SNX18	Q96RF0	628 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	TRIB1	Q96RU8	372 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	NPAS1	Q99742	590 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	KLHDC3	Q9BQ90	382 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	FUZ	Q9BT04	418 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	ASPN	Q9BXN1	380 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	NDEL1	Q9GZM8	345 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	YY1AP1	Q9H869	796 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	MAN2C1	Q9NTJ4	1040 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	NDUFAF4	Q9P032	175 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	RIMS3	Q9UJD0	308 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	SH3GLB1	Q9Y371	365 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	FLVCR1	Q9Y5Y0	555 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	CELSR2	Q9HCU4	2923 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	NOTCH2	Q04721	2471 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	CACNA1D	Q01668	2161 aa		4.53	□□□□□ -1.68
HDAC6-223	ENST00000480525	DCHS2	Q6V1P9	2916 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	TCRBV3S1	A0A5B6	114 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	C17orf51	A8MQB3	221 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	FFAR1	O14842	300 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	GSC2	O15499	205 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	ZNF432	O94892	652 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	PLG	P00747	810 aa	Predicted RBP	4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	THY1	P04216	161 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	FABP3	P05413	133 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	FCGR1A	P12314	374 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	GTF2E2	P29084	291 aa	Known RBP	4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	SHC1	P29353	583 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	SSTR2	P30874	369 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	UQCRC1	P31930	480 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	SFTPD	P35247	375 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	IFNGR2	P38484	337 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	CD79B	P40259	229 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	TAS2R41	P59536	307 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	MXRA7	P84157	204 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	TGFBR3	Q03167	851 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	PRKCD	Q05655	676 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	GABPB1	Q06547	395 aa	Predicted RBP	4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	PUDP	Q08623	228 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	RASGEF1B	Q0VAM2	473 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	ITGAD	Q13349	1161 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	HIST3H3	Q16695	136 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	FAM98B	Q52LJ0	330 aa	Known RBP	4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	LRRC23	Q53EV4	343 aa	Predicted RBP	4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	OTUD3	Q5T2D3	398 aa	Predicted RBP	4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	FBXW9	Q5XUX1	488 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	MBOAT2	Q6ZWT7	520 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	CREB3L2	Q70SY1	520 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	OLIG3	Q7RTU3	272 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	P4HA3	Q7Z4N8	544 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	GDF7	Q7Z4P5	450 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	TSEN54	Q7Z6J9	526 aa	Known RBP	4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	MCEMP1	Q8IX19	187 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	UBQLNL	Q8IYU4	475 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	CADM2	Q8N3J6	435 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	RPRML	Q8N4K4	120 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	SMYD1	Q8NB12	490 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	STEAP2	Q8NFT2	490 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	OR4D11	Q8NGI4	311 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	OR5M9	Q8NGP3	310 aa		4.52	□□□□□ -1.69
HDAC6-223	ENST00000480525	OR6X1	Q8NH79	312 aa		4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 85 ms