RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 OR4E1P0C645 316 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 NR2F1P10589 423 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 PTHLHP12272 177 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 MPIP34949 423 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 MANFP55145 182 aaKnown RBP12.73□□□□□ -0.37
HDAC1-206ENST00000476391 PKIAP61925 76 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 ACTC1P68032 377 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 ACTA1P68133 377 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 B4GALNT1Q00973 533 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 POU4F2Q12837 409 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 HMGN3Q15651 99 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 AGTRAPQ6RW13 159 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 BAP18Q8IXM2 172 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 BBS10Q8TAM1 723 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 NUDCD2Q8WVJ2 157 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 AUTS2Q8WXX7 1259 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 CPNE2Q96FN4 548 aaPredicted RBP12.73□□□□□ -0.37
HDAC1-206ENST00000476391 MED8Q96G25 268 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 SMAD5Q99717 465 aaKnown RBP12.73□□□□□ -0.37
HDAC1-206ENST00000476391 UBQLN3Q9H347 655 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 BCL2L10Q9HD36 194 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 KRCC1Q9NPI7 259 aaPredicted RBP12.73□□□□□ -0.37
HDAC1-206ENST00000476391 TMEM184BQ9Y519 407 aaPredicted RBP12.73□□□□□ -0.37
HDAC1-206ENST00000476391 ETV7Q9Y603 341 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 GXYLT2A0PJZ3 443 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 ZC3H12DA2A288 527 aaKnown RBP12.72□□□□□ -0.37
HDAC1-206ENST00000476391 PRAMEF27A3QJZ7 478 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 MBLAC1A4D2B0 266 aaPredicted RBP12.72□□□□□ -0.37
HDAC1-206ENST00000476391 BTBD17A6NE02 478 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 CLDN4O14493 209 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 BCAT2O15382 392 aaPredicted RBP12.72□□□□□ -0.37
HDAC1-206ENST00000476391 CLDN7O95471 211 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 KLK1P06870 262 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 SBK2P0C263 348 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 CTNNB1P35222 781 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 MAGEB1P43366 347 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 CASP6P55212 293 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 RPS11P62280 158 aaKnown RBP eCLIP12.72□□□□□ -0.37
HDAC1-206ENST00000476391 ARF5P84085 180 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 AIMP2Q13155 320 aaKnown RBP12.72□□□□□ -0.37
HDAC1-206ENST00000476391 TDGQ13569 410 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 CDK5R1Q15078 307 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 ELAVL1Q15717 326 aaKnown RBP12.72□□□□□ -0.37
HDAC1-206ENST00000476391 MST1LQ2TV78 715 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 ATPAF1Q5TC12 328 aaPredicted RBP12.72□□□□□ -0.37
HDAC1-206ENST00000476391 UNQ9370/PRO34162Q6UXP9 181 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 SERPINA13PQ6UXR4 307 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 UNQ6126/PRO20091Q6UXV3 157 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 TAS1R1Q7RTX1 841 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 SNX33Q8WV41 574 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 DNAJB3Q8WWF6 145 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 SMPDL3AQ92484 453 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 PMM1Q92871 262 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 S100PBPQ96BU1 408 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 SAT2Q96F10 170 aaPredicted RBP12.72□□□□□ -0.37
HDAC1-206ENST00000476391 TMEM169Q96HH4 297 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 PPP1R16AQ96I34 528 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 NECAB3Q96P71 396 aaPredicted RBP12.72□□□□□ -0.37
HDAC1-206ENST00000476391 ADAM19Q9H013 955 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 DUSP15Q9H1R2 295 aaPredicted RBP12.72□□□□□ -0.37
HDAC1-206ENST00000476391 MYOZ1Q9NP98 299 aaPredicted RBP12.72□□□□□ -0.37
HDAC1-206ENST00000476391 RPS10P5Q9NQ39 176 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 NOD1Q9Y239 953 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 FAM96BQ9Y3D0 163 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 A6NLC8 198 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 B4GALT2O60909 372 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 CNMDO75829 334 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 GLSO94925 669 aaPredicted RBP12.72□□□□□ -0.37
HDAC1-206ENST00000476391 FGF19O95750 216 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 ITGB2P05107 769 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 FAM157CP0CG43 387 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 AKAIN1P0CW23 69 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 BUD31P41223 144 aaPredicted RBP12.72□□□□□ -0.37
HDAC1-206ENST00000476391 RBM34P42696 430 aaKnown RBP12.72□□□□□ -0.37
HDAC1-206ENST00000476391 CDKN3Q16667 212 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 DECR1Q16698 335 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 PNLIPRP3Q17RR3 467 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 OR51S1Q8NGJ8 323 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 OR10R2Q8NGX6 335 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 PPP1R1CQ8WVI7 109 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 DIO2Q92813 273 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 OR14A2Q96R54 314 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 CHST6Q9GZX3 395 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 DMRT3Q9NQL9 472 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 GAR1Q9NY12 217 aaKnown RBP12.72□□□□□ -0.37
HDAC1-206ENST00000476391 LHX3Q9UBR4 397 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 CACFD1Q9UGQ2 172 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 IL20RAQ9UHF4 553 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 KPTNQ9Y664 436 aa12.72□□□□□ -0.37
HDAC1-206ENST00000476391 IGLV3-16A0A075B6K0 115 aa12.71□□□□□ -0.37
HDAC1-206ENST00000476391 A0A0A6YYC8 382 aaPredicted RBP12.71□□□□□ -0.37
HDAC1-206ENST00000476391 TSTD3H0UI37 97 aa12.71□□□□□ -0.37
HDAC1-206ENST00000476391 I3L1I5 382 aaPredicted RBP12.71□□□□□ -0.37
HDAC1-206ENST00000476391 MBTPS2O43462 519 aa12.71□□□□□ -0.37
HDAC1-206ENST00000476391 PPP1R3DO95685 299 aa12.71□□□□□ -0.37
HDAC1-206ENST00000476391 CD160O95971 181 aa12.71□□□□□ -0.37
HDAC1-206ENST00000476391 IFNA17P01571 189 aa12.71□□□□□ -0.37
HDAC1-206ENST00000476391 CD5P06127 495 aa12.71□□□□□ -0.37
HDAC1-206ENST00000476391 ADH1AP07327 375 aa12.71□□□□□ -0.37
HDAC1-206ENST00000476391 CD14P08571 375 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms