RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 P2RY4P51582 365 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 POLR2HP52434 150 aaKnown RBP4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 UBE2NP61088 152 aaKnown RBP4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 ETF1P62495 437 aaKnown RBP4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 TUBA1BP68363 451 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 TUBA4AP68366 448 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 SLC35A1P78382 337 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 POU3F1Q03052 451 aaPredicted RBP4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 MSMPQ1L6U9 139 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 LSM12Q3MHD2 195 aaKnown RBP4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 UGT3A2Q3SY77 523 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 FAM153CQ494X1 144 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 ELFN2Q5R3F8 820 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 OTUD3Q5T2D3 398 aaPredicted RBP4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 KANK2Q63ZY3 851 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 TYW3Q6IPR3 259 aaKnown RBP4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 SHQ1Q6PI26 577 aaKnown RBP4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 SHISA2Q6UWI4 295 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 FRRS1Q6ZNA5 592 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 TUBA1AQ71U36 451 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 AAED1Q7RTV5 226 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 C16orf62Q7Z3J2 963 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 C6orf120Q7Z4R8 191 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 SPATA21Q7Z572 469 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 ABHD12BQ7Z5M8 362 aaPredicted RBP4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 CARM1Q86X55 608 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 RIMKLAQ8IXN7 391 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 CLEC4FQ8N1N0 589 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 KRTCAP2Q8N6L1 136 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 TMEM99Q8N816 258 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 CLDND2Q8NHS1 167 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 ZNF417Q8TAU3 575 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 MIPOL1Q8TD10 442 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 TWIST2Q8WVJ9 160 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 CKAP2Q8WWK9 683 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 IFT81Q8WYA0 676 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 DDIT4LQ96D03 193 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 COQ8BQ96D53 544 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 ZG16BQ96DA0 208 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 AURKBQ96GD4 344 aaPredicted RBP4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 ANKRD27Q96NW4 1050 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 LRRC37BQ96QE4 947 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 ZNF587Q96SQ5 575 aaPredicted RBP4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 NAA11Q9BSU3 229 aaPredicted RBP4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 ZNF747Q9BV97 191 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 SF3B5Q9BWJ5 86 aaKnown RBP4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 TPK1Q9H3S4 243 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 NARFLQ9H6Q4 476 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 MOV10Q9HCE1 1003 aaKnown RBP4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 DYNLRB1Q9NP97 96 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 BRD7Q9NPI1 651 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 ESM1Q9NQ30 184 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 ATAD3AQ9NVI7 634 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 TMEM45AQ9NWC5 275 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 OXSMQ9NWU1 459 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 PSMC3IPQ9P2W1 217 aaPredicted RBP4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 GIMAP2Q9UG22 337 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 DCDC2Q9UHG0 476 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 OSGIN1Q9UJX0 560 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 TMED7Q9Y3B3 224 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 GRIP1Q9Y3R0 1128 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 WDR45Q9Y484 360 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 PCDHGB1Q9Y5G3 927 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 WNK1Q9H4A3 2382 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 DNAH9Q9NYC9 4486 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 LOC105371242A0A075B767 164 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 TRAV20A0A0B4J274 112 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 A0A1W2PPM1 405 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 PRAMEF27A3QJZ7 478 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 ZNF503-AS2A6NEH8 195 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 OR6C65A6NJZ3 312 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 LIPT2A6NK58 231 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 AQP7P3A6NL99 342 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 HMGB1P1B2RPK0 211 aaPredicted RBP4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 FAAHO00519 579 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 CFLARO15519 480 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 RIPK2O43353 540 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 SYNGR3O43761 229 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 PEX11AO75192 247 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 SKAP2O75563 359 aaPredicted RBP4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 LYPLA1O75608 230 aaPredicted RBP4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 UPK3AO75631 287 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 KRT33AO76009 404 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 NCR1O76036 304 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 AKR7A3O95154 331 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 CHEK2O96017 543 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 PNPP00491 289 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 HPXP02790 462 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 GPIP06744 558 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 CHRNGP07510 517 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 OR12D1P0DN82 309 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 CPA3P15088 417 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 PRPS1L1P21108 318 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 ACHEP22303 614 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 TACR3P29371 465 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 CASQ1P31415 396 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 CRHR1P34998 444 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 GPR6P46095 362 aaPredicted RBP4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 HTR3AP46098 478 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 MAP2K6P52564 334 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms