RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 CDH12P55289 794 aa13.22□□□□□ -0.29
ATG4B-213ENST00000460211 FOXD4Q12950 439 aaPredicted RBP13.22□□□□□ -0.29
ATG4B-213ENST00000460211 BEX5Q5H9J7 111 aa13.22□□□□□ -0.29
ATG4B-213ENST00000460211 BHLHA15Q7RTS1 189 aaPredicted RBP13.22□□□□□ -0.29
ATG4B-213ENST00000460211 SSX8Q7RTT4 187 aa13.22□□□□□ -0.29
ATG4B-213ENST00000460211 AAED1Q7RTV5 226 aa13.22□□□□□ -0.29
ATG4B-213ENST00000460211 TREML1Q86YW5 311 aa13.22□□□□□ -0.29
ATG4B-213ENST00000460211 SLC15A3Q8IY34 581 aa13.22□□□□□ -0.29
ATG4B-213ENST00000460211 OR9K2Q8NGE7 335 aa13.22□□□□□ -0.29
ATG4B-213ENST00000460211 OR6T1Q8NGN1 323 aa13.22□□□□□ -0.29
ATG4B-213ENST00000460211 OR6S1Q8NH40 331 aa13.22□□□□□ -0.29
ATG4B-213ENST00000460211 S100PBPQ96BU1 408 aa13.22□□□□□ -0.29
ATG4B-213ENST00000460211 PIK3IP1Q96FE7 263 aa13.22□□□□□ -0.29
ATG4B-213ENST00000460211 ASB6Q9NWX5 421 aa13.22□□□□□ -0.29
ATG4B-213ENST00000460211 UPB1Q9UBR1 384 aa13.22□□□□□ -0.29
ATG4B-213ENST00000460211 ST6GALNAC2Q9UJ37 374 aa13.22□□□□□ -0.29
ATG4B-213ENST00000460211 PLEKHA6Q9Y2H5 1048 aa13.22□□□□□ -0.29
ATG4B-213ENST00000460211 SH3GLB1Q9Y371 365 aa13.22□□□□□ -0.29
ATG4B-213ENST00000460211 CIB4A0PJX0 185 aa13.21□□□□□ -0.29
ATG4B-213ENST00000460211 TRAPPC13A5PLN9 417 aa13.21□□□□□ -0.29
ATG4B-213ENST00000460211 CPSF4LA6NMK7 179 aaKnown RBP13.21□□□□□ -0.29
ATG4B-213ENST00000460211 CHP2O43745 196 aa13.21□□□□□ -0.29
ATG4B-213ENST00000460211 TPST2O60704 377 aa13.21□□□□□ -0.29
ATG4B-213ENST00000460211 KDELR2P33947 212 aa13.21□□□□□ -0.29
ATG4B-213ENST00000460211 NR1H2P55055 460 aa13.21□□□□□ -0.29
ATG4B-213ENST00000460211 EGR4Q05215 589 aa13.21□□□□□ -0.29
ATG4B-213ENST00000460211 LIPEQ05469 1076 aa13.21□□□□□ -0.29
ATG4B-213ENST00000460211 LRRC23Q53EV4 343 aaPredicted RBP13.21□□□□□ -0.29
ATG4B-213ENST00000460211 ENTPD8Q5MY95 495 aa13.21□□□□□ -0.29
ATG4B-213ENST00000460211 H1FNTQ75WM6 255 aaPredicted RBP13.21□□□□□ -0.29
ATG4B-213ENST00000460211 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.21□□□□□ -0.29
ATG4B-213ENST00000460211 P2RY8Q86VZ1 359 aa13.21□□□□□ -0.29
ATG4B-213ENST00000460211 WFDC8Q8IUA0 241 aa13.21□□□□□ -0.29
ATG4B-213ENST00000460211 C10orf53Q8N6V4 93 aa13.21□□□□□ -0.29
ATG4B-213ENST00000460211 LZICQ8WZA0 190 aa13.21□□□□□ -0.29
ATG4B-213ENST00000460211 NINJ1Q92982 152 aa13.21□□□□□ -0.29
ATG4B-213ENST00000460211 TMEM45BQ96B21 275 aa13.21□□□□□ -0.29
ATG4B-213ENST00000460211 MUCL1Q96DR8 90 aa13.21□□□□□ -0.29
ATG4B-213ENST00000460211 WFDC6Q9BQY6 131 aa13.21□□□□□ -0.29
ATG4B-213ENST00000460211 TMEM43Q9BTV4 400 aa13.21□□□□□ -0.29
ATG4B-213ENST00000460211 PTDSS2Q9BVG9 487 aa13.21□□□□□ -0.29
ATG4B-213ENST00000460211 ASPNQ9BXN1 380 aa13.21□□□□□ -0.29
ATG4B-213ENST00000460211 CMTM6Q9NX76 183 aa13.21□□□□□ -0.29
ATG4B-213ENST00000460211 B3GALT5Q9Y2C3 310 aa13.21□□□□□ -0.29
ATG4B-213ENST00000460211 CORINQ9Y5Q5 1042 aa13.21□□□□□ -0.29
ATG4B-213ENST00000460211 HRNRQ86YZ3 2850 aaPredicted RBP13.21□□□□□ -0.3
ATG4B-213ENST00000460211 VPS13CQ709C8 3753 aa13.21□□□□□ -0.3
ATG4B-213ENST00000460211 OR6C65A6NJZ3 312 aa13.2□□□□□ -0.3
ATG4B-213ENST00000460211 FTCDNL1E5RQL4 147 aa13.2□□□□□ -0.3
ATG4B-213ENST00000460211 DCTN3O75935 186 aa13.2□□□□□ -0.3
ATG4B-213ENST00000460211 LYZL6O75951 148 aa13.2□□□□□ -0.3
ATG4B-213ENST00000460211 KRT33AO76009 404 aa13.2□□□□□ -0.3
ATG4B-213ENST00000460211 IGHV3-9P01782 118 aa13.2□□□□□ -0.3
ATG4B-213ENST00000460211 ZNF43P17038 809 aa13.2□□□□□ -0.3
ATG4B-213ENST00000460211 GGT1P19440 569 aa13.2□□□□□ -0.3
ATG4B-213ENST00000460211 DNASE1P24855 282 aa13.2□□□□□ -0.3
ATG4B-213ENST00000460211 IFNA8P32881 189 aa13.2□□□□□ -0.3
ATG4B-213ENST00000460211 SLC7A2P52569 658 aa13.2□□□□□ -0.3
ATG4B-213ENST00000460211 IL1RL1Q01638 556 aa13.2□□□□□ -0.3
ATG4B-213ENST00000460211 TGFBR3Q03167 851 aa13.2□□□□□ -0.3
ATG4B-213ENST00000460211 FAPQ12884 760 aa13.2□□□□□ -0.3
ATG4B-213ENST00000460211 C1DQ13901 141 aaKnown RBP13.2□□□□□ -0.3
ATG4B-213ENST00000460211 TSC22D1Q15714 1073 aa13.2□□□□□ -0.3
ATG4B-213ENST00000460211 ALKBH2Q6NS38 261 aa13.2□□□□□ -0.3
ATG4B-213ENST00000460211 TTC33Q6PID6 262 aaPredicted RBP13.2□□□□□ -0.3
ATG4B-213ENST00000460211 ABHD12BQ7Z5M8 362 aaPredicted RBP13.2□□□□□ -0.3
ATG4B-213ENST00000460211 PIGWQ7Z7B1 504 aa13.2□□□□□ -0.3
ATG4B-213ENST00000460211 CARM1Q86X55 608 aa13.2□□□□□ -0.3
ATG4B-213ENST00000460211 POMGNT2Q8NAT1 580 aa13.2□□□□□ -0.3
ATG4B-213ENST00000460211 ADAMTS16Q8TE57 1224 aa13.2□□□□□ -0.3
ATG4B-213ENST00000460211 TAAR8Q969N4 342 aa13.2□□□□□ -0.3
ATG4B-213ENST00000460211 MPP4Q96JB8 637 aa13.2□□□□□ -0.3
ATG4B-213ENST00000460211 OXGR1Q96P68 337 aa13.2□□□□□ -0.3
ATG4B-213ENST00000460211 LRRC37BQ96QE4 947 aa13.2□□□□□ -0.3
ATG4B-213ENST00000460211 POLR2J2Q9GZM3 115 aaKnown RBP13.2□□□□□ -0.3
ATG4B-213ENST00000460211 POLR2J3Q9H1A7 115 aaKnown RBP13.2□□□□□ -0.3
ATG4B-213ENST00000460211 TAS2R16Q9NYV7 291 aa13.2□□□□□ -0.3
ATG4B-213ENST00000460211 FLNAP21333 2647 aaKnown RBP13.19□□□□□ -0.3
ATG4B-213ENST00000460211 ABCA2Q9BZC7 2435 aa13.19□□□□□ -0.3
ATG4B-213ENST00000460211 IGKV1D-42A0A075B6H8 117 aa13.19□□□□□ -0.3
ATG4B-213ENST00000460211 DEFB108AA8MXU0 73 aa13.19□□□□□ -0.3
ATG4B-213ENST00000460211 AKAP8O43823 692 aaKnown RBP13.19□□□□□ -0.3
ATG4B-213ENST00000460211 MT-ATP6P00846 226 aa13.19□□□□□ -0.3
ATG4B-213ENST00000460211 THBDP07204 575 aa13.19□□□□□ -0.3
ATG4B-213ENST00000460211 NQO1P15559 274 aaKnown RBP13.19□□□□□ -0.3
ATG4B-213ENST00000460211 COX5AP20674 150 aa13.19□□□□□ -0.3
ATG4B-213ENST00000460211 IGHV1-2P23083 117 aa13.19□□□□□ -0.3
ATG4B-213ENST00000460211 P2RY4P51582 365 aa13.19□□□□□ -0.3
ATG4B-213ENST00000460211 TAS2R41P59536 307 aa13.19□□□□□ -0.3
ATG4B-213ENST00000460211 PSME3P61289 254 aa13.19□□□□□ -0.3
ATG4B-213ENST00000460211 SELENOWP63302 87 aa13.19□□□□□ -0.3
ATG4B-213ENST00000460211 KEAP1Q14145 624 aa13.19□□□□□ -0.3
ATG4B-213ENST00000460211 NPTX1Q15818 432 aa13.19□□□□□ -0.3
ATG4B-213ENST00000460211 STK11Q15831 433 aa13.19□□□□□ -0.3
ATG4B-213ENST00000460211 CYBRD1Q53TN4 286 aa13.19□□□□□ -0.3
ATG4B-213ENST00000460211 TIMM23BQ5SRD1 257 aa13.19□□□□□ -0.3
ATG4B-213ENST00000460211 OR7E24Q6IFN5 339 aa13.19□□□□□ -0.3
ATG4B-213ENST00000460211 CREB3L2Q70SY1 520 aa13.19□□□□□ -0.3
ATG4B-213ENST00000460211 Q71RC1 249 aaPredicted RBP13.19□□□□□ -0.3
ATG4B-213ENST00000460211 RBM45Q8IUH3 476 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms